RNA–Protein interactions for RNA: ENST00000505441.1

GRAMD2B-205, Transcript of GRAM domain containing 2B, humanhuman

TSL 3

Gene GRAMD2B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-205ENST00000505441 CERKQ8TCT0 537 aa12.49□□□□□ -0.41
GRAMD2B-205ENST00000505441 ESF1Q9H501 851 aaKnown RBP12.48□□□□□ -0.41
GRAMD2B-205ENST00000505441 CCNB3Q8WWL7 1395 aa12.47□□□□□ -0.41
GRAMD2B-205ENST00000505441 SPAG9O60271 1321 aaKnown RBP12.47□□□□□ -0.41
GRAMD2B-205ENST00000505441 CFDP1Q9UEE9 299 aaPredicted RBP12.47□□□□□ -0.41
GRAMD2B-205ENST00000505441 MTUS2Q5JR59 1369 aa12.46□□□□□ -0.41
GRAMD2B-205ENST00000505441 ZNF692Q9BU19 519 aaPredicted RBP12.46□□□□□ -0.41
GRAMD2B-205ENST00000505441 ATP7AQ04656 1500 aa12.46□□□□□ -0.42
GRAMD2B-205ENST00000505441 CNTLNQ9NXG0 1405 aa12.45□□□□□ -0.42
GRAMD2B-205ENST00000505441 KIAA1107Q9UPP5 1409 aa12.45□□□□□ -0.42
GRAMD2B-205ENST00000505441 INO80Q9ULG1 1556 aaPredicted RBP12.45□□□□□ -0.42
GRAMD2B-205ENST00000505441 FXR2P51116 673 aaKnown RBP eCLIP12.45□□□□□ -0.42
GRAMD2B-205ENST00000505441 SUPT6HQ7KZ85 1726 aaKnown RBP12.45□□□□□ -0.42
GRAMD2B-205ENST00000505441 PLEKHH2Q8IVE3 1493 aa12.44□□□□□ -0.42
GRAMD2B-205ENST00000505441 TIAM1Q13009 1591 aa12.43□□□□□ -0.42
GRAMD2B-205ENST00000505441 ZNF644Q9H582 1327 aaPredicted RBP12.43□□□□□ -0.42
GRAMD2B-205ENST00000505441 CLEC11AQ9Y240 323 aa12.43□□□□□ -0.42
GRAMD2B-205ENST00000505441 PLXNC1O60486 1568 aa12.43□□□□□ -0.42
GRAMD2B-205ENST00000505441 A2MP01023 1474 aa12.42□□□□□ -0.42
GRAMD2B-205ENST00000505441 ZMYM3Q14202 1370 aa12.42□□□□□ -0.42
GRAMD2B-205ENST00000505441 EHBP1L1Q8N3D4 1523 aa12.42□□□□□ -0.42
GRAMD2B-205ENST00000505441 MROH2AA6NES4 1674 aa12.42□□□□□ -0.42
GRAMD2B-205ENST00000505441 PTPRTO14522 1441 aa12.41□□□□□ -0.42
GRAMD2B-205ENST00000505441 CEP162Q5TB80 1403 aa12.41□□□□□ -0.42
GRAMD2B-205ENST00000505441 NPATQ14207 1427 aa12.4□□□□□ -0.42
GRAMD2B-205ENST00000505441 NCOA1Q15788 1441 aa12.4□□□□□ -0.42
GRAMD2B-205ENST00000505441 CLTCQ00610 1675 aaKnown RBP12.4□□□□□ -0.42
GRAMD2B-205ENST00000505441 MBD5Q9P267 1494 aa12.4□□□□□ -0.43
GRAMD2B-205ENST00000505441 HAX1O00165 279 aa12.39□□□□□ -0.43
GRAMD2B-205ENST00000505441 GGT6Q6P531 493 aa12.38□□□□□ -0.43
GRAMD2B-205ENST00000505441 SPDYE1Q8NFV5 336 aaPredicted RBP12.38□□□□□ -0.43
GRAMD2B-205ENST00000505441 SP7Q8TDD2 431 aaPredicted RBP12.38□□□□□ -0.43
GRAMD2B-205ENST00000505441 SSUH2Q9Y2M2 353 aa12.38□□□□□ -0.43
GRAMD2B-205ENST00000505441 CAMSAP1Q5T5Y3 1602 aa12.37□□□□□ -0.43
GRAMD2B-205ENST00000505441 ADGBQ8N7X0 1667 aa12.37□□□□□ -0.43
GRAMD2B-205ENST00000505441 PTPRKQ15262 1439 aa12.37□□□□□ -0.43
GRAMD2B-205ENST00000505441 LTBP4Q8N2S1 1624 aa12.36□□□□□ -0.43
GRAMD2B-205ENST00000505441 NCOA2Q15596 1464 aa12.35□□□□□ -0.43
GRAMD2B-205ENST00000505441 MYO3AQ8NEV4 1616 aa12.35□□□□□ -0.43
GRAMD2B-205ENST00000505441 RTEL1-TNFRSF6BF6WH68 1400 aa12.35□□□□□ -0.43
GRAMD2B-205ENST00000505441 NCKAP5LQ9HCH0 1330 aa12.35□□□□□ -0.43
GRAMD2B-205ENST00000505441 ZNF142P52746 1687 aaPredicted RBP12.34□□□□□ -0.43
GRAMD2B-205ENST00000505441 CAMSAP2Q08AD1 1489 aa12.34□□□□□ -0.43
GRAMD2B-205ENST00000505441 DHX29Q7Z478 1369 aaKnown RBP12.33□□□□□ -0.44
GRAMD2B-205ENST00000505441 CEP170BQ9Y4F5 1589 aaPredicted RBP12.33□□□□□ -0.44
GRAMD2B-205ENST00000505441 CCDC141Q6ZP82 1450 aa12.33□□□□□ -0.44
GRAMD2B-205ENST00000505441 PLA2R1Q13018 1463 aa12.31□□□□□ -0.44
GRAMD2B-205ENST00000505441 TCOF1Q13428 1488 aaKnown RBP12.3□□□□□ -0.44
GRAMD2B-205ENST00000505441 KIF3BO15066 747 aa12.3□□□□□ -0.44
GRAMD2B-205ENST00000505441 ZNF335Q9H4Z2 1342 aaPredicted RBP12.3□□□□□ -0.44
GRAMD2B-205ENST00000505441 LOC105371045A0A1W2PR82 267 aa12.29□□□□□ -0.44
GRAMD2B-205ENST00000505441 PRKAR2AP13861 404 aaKnown RBP12.29□□□□□ -0.44
GRAMD2B-205ENST00000505441 VPS8Q8N3P4 1428 aa12.28□□□□□ -0.44
GRAMD2B-205ENST00000505441 A2ML1A8K2U0 1454 aa12.28□□□□□ -0.44
GRAMD2B-205ENST00000505441 IQSEC2Q5JU85 1478 aa12.28□□□□□ -0.44
GRAMD2B-205ENST00000505441 PKD2Q13563 968 aa12.28□□□□□ -0.44
GRAMD2B-205ENST00000505441 FBXO31Q5XUX0 539 aaPredicted RBP12.28□□□□□ -0.44
GRAMD2B-205ENST00000505441 DNMT1P26358 1616 aaKnown RBP12.28□□□□□ -0.44
GRAMD2B-205ENST00000505441 LRRC9Q6ZRR7 1453 aa12.27□□□□□ -0.44
GRAMD2B-205ENST00000505441 KDM5DQ9BY66 1539 aa12.27□□□□□ -0.44
GRAMD2B-205ENST00000505441 ARHGEF5Q12774 1597 aa12.27□□□□□ -0.44
GRAMD2B-205ENST00000505441 RSPH4AQ5TD94 716 aa12.27□□□□□ -0.45
GRAMD2B-205ENST00000505441 TNRQ92752 1358 aa12.26□□□□□ -0.45
GRAMD2B-205ENST00000505441 PZPP20742 1482 aa12.26□□□□□ -0.45
GRAMD2B-205ENST00000505441 KANK4Q5T7N3 995 aaPredicted RBP12.25□□□□□ -0.45
GRAMD2B-205ENST00000505441 WASHC2CQ9Y4E1 1318 aa12.25□□□□□ -0.45
GRAMD2B-205ENST00000505441 DISP3Q9P2K9 1392 aa12.25□□□□□ -0.45
GRAMD2B-205ENST00000505441 TSPY4P0CV99 314 aa12.24□□□□□ -0.45
GRAMD2B-205ENST00000505441 TSPY10P0CW01 314 aa12.24□□□□□ -0.45
GRAMD2B-205ENST00000505441 FAM135AQ9P2D6 1515 aa12.24□□□□□ -0.45
GRAMD2B-205ENST00000505441 NEURL4Q96JN8 1562 aa12.22□□□□□ -0.45
GRAMD2B-205ENST00000505441 ILDR2Q71H61 639 aa12.22□□□□□ -0.45
GRAMD2B-205ENST00000505441 MAST1Q9Y2H9 1570 aa12.22□□□□□ -0.45
GRAMD2B-205ENST00000505441 MIA2Q96PC5 1412 aa12.21□□□□□ -0.45
GRAMD2B-205ENST00000505441 POLR1AO95602 1720 aaPredicted RBP12.21□□□□□ -0.45
GRAMD2B-205ENST00000505441 RNF17Q9BXT8 1623 aaKnown RBP12.21□□□□□ -0.46
GRAMD2B-205ENST00000505441 MAP3K1Q13233 1512 aa12.21□□□□□ -0.46
GRAMD2B-205ENST00000505441 MYOM3Q5VTT5 1437 aa12.2□□□□□ -0.46
GRAMD2B-205ENST00000505441 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.2□□□□□ -0.46
GRAMD2B-205ENST00000505441 UBAP1LF5GYI3 381 aa12.2□□□□□ -0.46
GRAMD2B-205ENST00000505441 SPATA31D1Q6ZQQ2 1576 aa12.2□□□□□ -0.46
GRAMD2B-205ENST00000505441 EVX2Q03828 476 aa12.19□□□□□ -0.46
GRAMD2B-205ENST00000505441 ABCC3O15438 1527 aa12.19□□□□□ -0.46
GRAMD2B-205ENST00000505441 NLRP1Q9C000 1473 aa12.19□□□□□ -0.46
GRAMD2B-205ENST00000505441 UGGT1Q9NYU2 1555 aa12.18□□□□□ -0.46
GRAMD2B-205ENST00000505441 PRR29P0C7W0 189 aa12.18□□□□□ -0.46
GRAMD2B-205ENST00000505441 CHADLQ6NUI6 762 aa12.18□□□□□ -0.46
GRAMD2B-205ENST00000505441 MROH1Q8NDA8 1641 aa12.18□□□□□ -0.46
GRAMD2B-205ENST00000505441 ZC3H13Q5T200 1668 aaKnown RBP12.17□□□□□ -0.46
GRAMD2B-205ENST00000505441 ANKLE2Q86XL3 938 aa12.17□□□□□ -0.46
GRAMD2B-205ENST00000505441 THEMISQ8N1K5 641 aaPredicted RBP12.17□□□□□ -0.46
GRAMD2B-205ENST00000505441 EIF2AK4Q9P2K8 1649 aaKnown RBP12.17□□□□□ -0.46
GRAMD2B-205ENST00000505441 SHANK2Q9UPX8 1470 aa12.16□□□□□ -0.46
GRAMD2B-205ENST00000505441 ERVK-7P63135 1459 aa12.15□□□□□ -0.46
GRAMD2B-205ENST00000505441 CEP152O94986 1710 aa12.15□□□□□ -0.46
GRAMD2B-205ENST00000505441 VWDEQ8N2E2 1590 aa12.15□□□□□ -0.46
GRAMD2B-205ENST00000505441 CPS1P31327 1500 aa12.15□□□□□ -0.46
GRAMD2B-205ENST00000505441 DUOX2Q9NRD8 1548 aa12.15□□□□□ -0.46
GRAMD2B-205ENST00000505441 DEPDC5O75140 1603 aa12.15□□□□□ -0.47
GRAMD2B-205ENST00000505441 MED14O60244 1454 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms