RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 ATAD2Q6PL18 1390 aa7.44□□□□□ -1.22
CPNE4-204ENST00000505331 YY1P25490 414 aa7.43□□□□□ -1.22
CPNE4-204ENST00000505331 CCDC125Q86Z20 511 aa7.42□□□□□ -1.22
CPNE4-204ENST00000505331 TNRQ92752 1358 aa7.42□□□□□ -1.22
CPNE4-204ENST00000505331 KDM5DQ9BY66 1539 aa7.42□□□□□ -1.22
CPNE4-204ENST00000505331 LRP6O75581 1613 aa7.41□□□□□ -1.22
CPNE4-204ENST00000505331 CTTNBP2Q8WZ74 1663 aa7.41□□□□□ -1.22
CPNE4-204ENST00000505331 SUPT6HQ7KZ85 1726 aaKnown RBP7.41□□□□□ -1.22
CPNE4-204ENST00000505331 RBM6P78332 1123 aaKnown RBP7.41□□□□□ -1.22
CPNE4-204ENST00000505331 RGS12O14924 1447 aa7.41□□□□□ -1.22
CPNE4-204ENST00000505331 ABCC1P33527 1531 aa7.41□□□□□ -1.22
CPNE4-204ENST00000505331 DEPDC5O75140 1603 aa7.41□□□□□ -1.22
CPNE4-204ENST00000505331 POLR1AO95602 1720 aaPredicted RBP7.41□□□□□ -1.22
CPNE4-204ENST00000505331 GGT6Q6P531 493 aa7.4□□□□□ -1.22
CPNE4-204ENST00000505331 FGD6Q6ZV73 1430 aa7.4□□□□□ -1.22
CPNE4-204ENST00000505331 LRRC9Q6ZRR7 1453 aa7.4□□□□□ -1.22
CPNE4-204ENST00000505331 FAM135AQ9P2D6 1515 aa7.4□□□□□ -1.22
CPNE4-204ENST00000505331 NCBP3Q53F19 620 aaKnown RBP7.39□□□□□ -1.23
CPNE4-204ENST00000505331 ARHGAP5Q13017 1502 aa7.38□□□□□ -1.23
CPNE4-204ENST00000505331 AFF2P51816 1311 aa7.38□□□□□ -1.23
CPNE4-204ENST00000505331 SUPT5HO00267 1087 aaKnown RBP7.38□□□□□ -1.23
CPNE4-204ENST00000505331 TMEM94Q12767 1356 aa7.37□□□□□ -1.23
CPNE4-204ENST00000505331 SENP3-EIF4A1A0A087X0R7 540 aa7.37□□□□□ -1.23
CPNE4-204ENST00000505331 FBXO31Q5XUX0 539 aaPredicted RBP7.37□□□□□ -1.23
CPNE4-204ENST00000505331 NGLY1Q96IV0 654 aa7.37□□□□□ -1.23
CPNE4-204ENST00000505331 QTRT2Q9H974 415 aaKnown RBP7.37□□□□□ -1.23
CPNE4-204ENST00000505331 ROBO1Q9Y6N7 1651 aa7.37□□□□□ -1.23
CPNE4-204ENST00000505331 LRP5O75197 1615 aa7.37□□□□□ -1.23
CPNE4-204ENST00000505331 NLRP1Q9C000 1473 aa7.36□□□□□ -1.23
CPNE4-204ENST00000505331 IQGAP1P46940 1657 aa7.36□□□□□ -1.23
CPNE4-204ENST00000505331 CLTCQ00610 1675 aaKnown RBP7.36□□□□□ -1.23
CPNE4-204ENST00000505331 SLAIN2Q9P270 581 aa7.36□□□□□ -1.23
CPNE4-204ENST00000505331 CDK11AQ9UQ88 783 aaPredicted RBP7.36□□□□□ -1.23
CPNE4-204ENST00000505331 SAMD9Q5K651 1589 aa7.36□□□□□ -1.23
CPNE4-204ENST00000505331 UGGT1Q9NYU2 1555 aa7.36□□□□□ -1.23
CPNE4-204ENST00000505331 STRCP1A6NGW2 1772 aa7.36□□□□□ -1.23
CPNE4-204ENST00000505331 MIA2Q96PC5 1412 aa7.35□□□□□ -1.23
CPNE4-204ENST00000505331 SPAG9O60271 1321 aaKnown RBP7.34□□□□□ -1.23
CPNE4-204ENST00000505331 ATP7AQ04656 1500 aa7.34□□□□□ -1.23
CPNE4-204ENST00000505331 PRXQ9BXM0 1461 aa7.34□□□□□ -1.23
CPNE4-204ENST00000505331 A2MP01023 1474 aa7.33□□□□□ -1.24
CPNE4-204ENST00000505331 PZPP20742 1482 aa7.33□□□□□ -1.24
CPNE4-204ENST00000505331 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.33□□□□□ -1.24
CPNE4-204ENST00000505331 PROSER2Q86WR7 435 aaPredicted RBP7.32□□□□□ -1.24
CPNE4-204ENST00000505331 KIDINS220Q9ULH0 1771 aa7.32□□□□□ -1.24
CPNE4-204ENST00000505331 MYO5CQ9NQX4 1742 aa7.32□□□□□ -1.24
CPNE4-204ENST00000505331 MSH6P52701 1360 aa7.32□□□□□ -1.24
CPNE4-204ENST00000505331 COL16A1Q07092 1604 aaPredicted RBP7.31□□□□□ -1.24
CPNE4-204ENST00000505331 PHLPP1O60346 1717 aa7.31□□□□□ -1.24
CPNE4-204ENST00000505331 PLXNC1O60486 1568 aa7.31□□□□□ -1.24
CPNE4-204ENST00000505331 KCNA6P17658 529 aa7.31□□□□□ -1.24
CPNE4-204ENST00000505331 HRCP23327 699 aa7.31□□□□□ -1.24
CPNE4-204ENST00000505331 ITSN2Q9NZM3 1697 aa7.31□□□□□ -1.24
CPNE4-204ENST00000505331 NWD1Q149M9 1564 aa7.3□□□□□ -1.24
CPNE4-204ENST00000505331 NPM3O75607 178 aaKnown RBP7.3□□□□□ -1.24
CPNE4-204ENST00000505331 C8orf37Q96NL8 207 aa7.3□□□□□ -1.24
CPNE4-204ENST00000505331 MAP3K1Q13233 1512 aa7.3□□□□□ -1.24
CPNE4-204ENST00000505331 NHSL1Q5SYE7 1610 aa7.3□□□□□ -1.24
CPNE4-204ENST00000505331 SCAF11Q99590 1463 aaKnown RBP7.3□□□□□ -1.24
CPNE4-204ENST00000505331 CLIP1P30622 1438 aa7.29□□□□□ -1.24
CPNE4-204ENST00000505331 TROQ12816 1431 aaPredicted RBP7.29□□□□□ -1.24
CPNE4-204ENST00000505331 TXNDC2Q86VQ3 553 aa7.29□□□□□ -1.24
CPNE4-204ENST00000505331 SAMD9LQ8IVG5 1584 aa7.29□□□□□ -1.24
CPNE4-204ENST00000505331 BLMP54132 1417 aaPredicted RBP7.28□□□□□ -1.24
CPNE4-204ENST00000505331 KIF14Q15058 1648 aa7.28□□□□□ -1.24
CPNE4-204ENST00000505331 LTKP29376 864 aa7.28□□□□□ -1.24
CPNE4-204ENST00000505331 C1QTNF8P60827 252 aa7.28□□□□□ -1.24
CPNE4-204ENST00000505331 WASHC2CQ9Y4E1 1318 aa7.27□□□□□ -1.24
CPNE4-204ENST00000505331 ABCC3O15438 1527 aa7.27□□□□□ -1.25
CPNE4-204ENST00000505331 TRPC5Q9UL62 973 aaPredicted RBP7.27□□□□□ -1.25
CPNE4-204ENST00000505331 EID1Q9Y6B2 187 aa7.27□□□□□ -1.25
CPNE4-204ENST00000505331 ZC3H13Q5T200 1668 aaKnown RBP7.27□□□□□ -1.25
CPNE4-204ENST00000505331 PRDM15P57071 1507 aaPredicted RBP7.27□□□□□ -1.25
CPNE4-204ENST00000505331 PSDA5PKW4 1024 aaPredicted RBP7.26□□□□□ -1.25
CPNE4-204ENST00000505331 RANGAP1P46060 587 aaPredicted RBP7.26□□□□□ -1.25
CPNE4-204ENST00000505331 SF3B2Q13435 895 aaKnown RBP7.26□□□□□ -1.25
CPNE4-204ENST00000505331 DEFB132Q7Z7B7 95 aa7.26□□□□□ -1.25
CPNE4-204ENST00000505331 XIRP1Q702N8 1843 aaKnown RBP7.26□□□□□ -1.25
CPNE4-204ENST00000505331 SHPRHQ149N8 1683 aa7.25□□□□□ -1.25
CPNE4-204ENST00000505331 ZNF784Q8NCA9 323 aaPredicted RBP7.25□□□□□ -1.25
CPNE4-204ENST00000505331 ATP1B4Q9UN42 357 aaPredicted RBP7.25□□□□□ -1.25
CPNE4-204ENST00000505331 AHDC1Q5TGY3 1603 aaPredicted RBP7.25□□□□□ -1.25
CPNE4-204ENST00000505331 NKTRP30414 1462 aaKnown RBP7.24□□□□□ -1.25
CPNE4-204ENST00000505331 BCL9LQ86UU0 1499 aa7.24□□□□□ -1.25
CPNE4-204ENST00000505331 HNRNPMP52272 730 aaKnown RBP eCLIP7.24□□□□□ -1.25
CPNE4-204ENST00000505331 USP21Q9UK80 565 aa7.24□□□□□ -1.25
CPNE4-204ENST00000505331 ZNF777Q9ULD5 760 aaPredicted RBP7.24□□□□□ -1.25
CPNE4-204ENST00000505331 TIAM1Q13009 1591 aa7.24□□□□□ -1.25
CPNE4-204ENST00000505331 ARHGAP23Q9P227 1491 aa7.24□□□□□ -1.25
CPNE4-204ENST00000505331 DHX29Q7Z478 1369 aaKnown RBP7.23□□□□□ -1.25
CPNE4-204ENST00000505331 KIF3BO15066 747 aa7.23□□□□□ -1.25
CPNE4-204ENST00000505331 CADPS2Q86UW7 1296 aa7.23□□□□□ -1.25
CPNE4-204ENST00000505331 LRRC59Q96AG4 307 aaKnown RBP7.23□□□□□ -1.25
CPNE4-204ENST00000505331 KIAA1107Q9UPP5 1409 aa7.23□□□□□ -1.25
CPNE4-204ENST00000505331 NCOA2Q15596 1464 aa7.23□□□□□ -1.25
CPNE4-204ENST00000505331 SLIT1O75093 1534 aa7.22□□□□□ -1.25
CPNE4-204ENST00000505331 SETD5Q9C0A6 1442 aa7.22□□□□□ -1.25
CPNE4-204ENST00000505331 NCOA3Q9Y6Q9 1424 aa7.22□□□□□ -1.25
CPNE4-204ENST00000505331 DIP2AQ14689 1571 aa7.21□□□□□ -1.25
CPNE4-204ENST00000505331 SLC34A2O95436 690 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms