RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 MYO3AQ8NEV4 1616 aa31.38■■■□□ 2.61
UBE2D3-220ENST00000505307 WASHC2CQ9Y4E1 1318 aa31.37■■■□□ 2.61
UBE2D3-220ENST00000505307 KDM5DQ9BY66 1539 aa31.37■■■□□ 2.61
UBE2D3-220ENST00000505307 MAST1Q9Y2H9 1570 aa31.37■■■□□ 2.61
UBE2D3-220ENST00000505307 CEP170BQ9Y4F5 1589 aaPredicted RBP31.36■■■□□ 2.61
UBE2D3-220ENST00000505307 PLA2R1Q13018 1463 aa31.36■■■□□ 2.61
UBE2D3-220ENST00000505307 PKD2Q13563 968 aa31.36■■■□□ 2.61
UBE2D3-220ENST00000505307 PZPP20742 1482 aa31.32■■■□□ 2.6
UBE2D3-220ENST00000505307 A2ML1A8K2U0 1454 aa31.31■■■□□ 2.6
UBE2D3-220ENST00000505307 NCKAP5LQ9HCH0 1330 aa31.29■■■□□ 2.6
UBE2D3-220ENST00000505307 TNRQ92752 1358 aa31.29■■■□□ 2.6
UBE2D3-220ENST00000505307 TCOF1Q13428 1488 aaKnown RBP31.27■■■□□ 2.6
UBE2D3-220ENST00000505307 FBXO31Q5XUX0 539 aaPredicted RBP31.26■■■□□ 2.59
UBE2D3-220ENST00000505307 LTBP4Q8N2S1 1624 aa31.24■■■□□ 2.59
UBE2D3-220ENST00000505307 RNF17Q9BXT8 1623 aaKnown RBP31.24■■■□□ 2.59
UBE2D3-220ENST00000505307 EIF2AK4Q9P2K8 1649 aaKnown RBP31.23■■■□□ 2.59
UBE2D3-220ENST00000505307 IQSEC2Q5JU85 1478 aa31.22■■■□□ 2.59
UBE2D3-220ENST00000505307 DNMT1P26358 1616 aaKnown RBP31.21■■■□□ 2.59
UBE2D3-220ENST00000505307 DUOX2Q9NRD8 1548 aa31.19■■■□□ 2.58
UBE2D3-220ENST00000505307 SHANK2Q9UPX8 1470 aa31.19■■■□□ 2.58
UBE2D3-220ENST00000505307 NLRP1Q9C000 1473 aa31.18■■■□□ 2.58
UBE2D3-220ENST00000505307 PTPN23Q9H3S7 1636 aa31.16■■■□□ 2.58
UBE2D3-220ENST00000505307 ZC3H13Q5T200 1668 aaKnown RBP31.16■■■□□ 2.58
UBE2D3-220ENST00000505307 ABCC5O15440 1437 aa31.15■■■□□ 2.58
UBE2D3-220ENST00000505307 ABCC3O15438 1527 aa31.15■■■□□ 2.58
UBE2D3-220ENST00000505307 THEMISQ8N1K5 641 aaPredicted RBP31.15■■■□□ 2.58
UBE2D3-220ENST00000505307 FGD6Q6ZV73 1430 aa31.15■■■□□ 2.58
UBE2D3-220ENST00000505307 KIF15Q9NS87 1388 aa31.14■■■□□ 2.58
UBE2D3-220ENST00000505307 ZNF335Q9H4Z2 1342 aaPredicted RBP31.12■■■□□ 2.57
UBE2D3-220ENST00000505307 DAPK1P53355 1430 aa31.1■■■□□ 2.57
UBE2D3-220ENST00000505307 ERBINQ96RT1 1412 aa31.1■■■□□ 2.57
UBE2D3-220ENST00000505307 ANKLE2Q86XL3 938 aa31.09■■■□□ 2.57
UBE2D3-220ENST00000505307 CROCC2H7BZ55 1655 aa31.09■■■□□ 2.57
UBE2D3-220ENST00000505307 RRP7BPQ9NSQ0 103 aa31.08■■■□□ 2.57
UBE2D3-220ENST00000505307 MROH1Q8NDA8 1641 aa31.08■■■□□ 2.57
UBE2D3-220ENST00000505307 SPATA31D1Q6ZQQ2 1576 aa31.07■■■□□ 2.56
UBE2D3-220ENST00000505307 UGGT1Q9NYU2 1555 aa31.07■■■□□ 2.56
UBE2D3-220ENST00000505307 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.05■■■□□ 2.561e-10■■■□□ 14.9
UBE2D3-220ENST00000505307 ERVK-7P63135 1459 aa31.04■■■□□ 2.56
UBE2D3-220ENST00000505307 ANKRD30AQ9BXX3 1397 aa31.04■■■□□ 2.56
UBE2D3-220ENST00000505307 POLR1AO95602 1720 aaPredicted RBP31.03■■■□□ 2.56
UBE2D3-220ENST00000505307 PRDM15P57071 1507 aaPredicted RBP31.01■■■□□ 2.55
UBE2D3-220ENST00000505307 ARHGAP31Q2M1Z3 1444 aa31■■■□□ 2.55
UBE2D3-220ENST00000505307 NEURL4Q96JN8 1562 aa31■■■□□ 2.55
UBE2D3-220ENST00000505307 KANK1Q14678 1352 aa30.98■■■□□ 2.55
UBE2D3-220ENST00000505307 CEP152O94986 1710 aa30.98■■■□□ 2.55
UBE2D3-220ENST00000505307 MED14O60244 1454 aa30.97■■■□□ 2.55
UBE2D3-220ENST00000505307 DEPDC5O75140 1603 aa30.96■■■□□ 2.55
UBE2D3-220ENST00000505307 CHIC2Q9UKJ5 165 aa30.95■■■□□ 2.55
UBE2D3-220ENST00000505307 NPHP4O75161 1426 aaPredicted RBP30.94■■■□□ 2.54
UBE2D3-220ENST00000505307 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.94■■■□□ 2.54
UBE2D3-220ENST00000505307 UBAP1LF5GYI3 381 aa30.93■■■□□ 2.54
UBE2D3-220ENST00000505307 CPS1P31327 1500 aa30.92■■■□□ 2.54
UBE2D3-220ENST00000505307 FAM50AQ14320 339 aaKnown RBP30.9■■■□□ 2.54
UBE2D3-220ENST00000505307 ADGRL2O95490 1459 aa30.89■■■□□ 2.54
UBE2D3-220ENST00000505307 CFAP65Q6ZU64 1925 aaKnown RBP30.86■■■□□ 2.53
UBE2D3-220ENST00000505307 DISP3Q9P2K9 1392 aa30.86■■■□□ 2.53
UBE2D3-220ENST00000505307 LMTK2Q8IWU2 1503 aa30.86■■■□□ 2.53
UBE2D3-220ENST00000505307 UBR1Q8IWV7 1749 aa30.83■■■□□ 2.53
UBE2D3-220ENST00000505307 IQGAP1P46940 1657 aa30.83■■■□□ 2.53
UBE2D3-220ENST00000505307 VWDEQ8N2E2 1590 aa30.83■■■□□ 2.53
UBE2D3-220ENST00000505307 SCAF11Q99590 1463 aaKnown RBP30.79■■■□□ 2.52
UBE2D3-220ENST00000505307 ARHGAP23Q9P227 1491 aa30.79■■■□□ 2.52
UBE2D3-220ENST00000505307 SLIT1O75093 1534 aa30.78■■■□□ 2.52
UBE2D3-220ENST00000505307 TOM1O60784 492 aa30.78■■■□□ 2.52
UBE2D3-220ENST00000505307 ANKRD50Q9ULJ7 1429 aa30.78■■■□□ 2.52
UBE2D3-220ENST00000505307 TXNDC2Q86VQ3 553 aa30.77■■■□□ 2.52
UBE2D3-220ENST00000505307 EID1Q9Y6B2 187 aa30.77■■■□□ 2.52
UBE2D3-220ENST00000505307 STAG3Q9UJ98 1225 aa30.76■■■□□ 2.51
UBE2D3-220ENST00000505307 LTKP29376 864 aa30.73■■■□□ 2.51
UBE2D3-220ENST00000505307 EFCAB6Q5THR3 1501 aa30.72■■■□□ 2.51
UBE2D3-220ENST00000505307 TMEM2Q9UHN6 1383 aa30.71■■■□□ 2.51
UBE2D3-220ENST00000505307 IDI1Q13907 227 aa30.71■■■□□ 2.51
UBE2D3-220ENST00000505307 NOS1P29475 1434 aa30.71■■■□□ 2.51
UBE2D3-220ENST00000505307 KDM5AP29375 1690 aaKnown RBP30.71■■■□□ 2.51
UBE2D3-220ENST00000505307 PIK3C2BO00750 1634 aa30.7■■■□□ 2.51
UBE2D3-220ENST00000505307 SLC52A1Q9NWF4 448 aa30.7■■■□□ 2.51
UBE2D3-220ENST00000505307 SCAF1Q9H7N4 1312 aaKnown RBP30.7■■■□□ 2.5
UBE2D3-220ENST00000505307 RPRD2Q5VT52 1461 aaKnown RBP30.69■■■□□ 2.5
UBE2D3-220ENST00000505307 ILDR2Q71H61 639 aa30.68■■■□□ 2.5
UBE2D3-220ENST00000505307 ROCK1Q13464 1354 aa30.67■■■□□ 2.5
UBE2D3-220ENST00000505307 PIP4K2BP78356 416 aa30.67■■■□□ 2.5
UBE2D3-220ENST00000505307 SYNMO15061 1565 aa30.64■■■□□ 2.5
UBE2D3-220ENST00000505307 LRRC7Q96NW7 1537 aa30.63■■■□□ 2.49
UBE2D3-220ENST00000505307 STRCP1A6NGW2 1772 aa30.59■■■□□ 2.49
UBE2D3-220ENST00000505307 TET3O43151 1660 aa30.58■■■□□ 2.49
UBE2D3-220ENST00000505307 ADGRB3O60242 1522 aa30.57■■■□□ 2.49
UBE2D3-220ENST00000505307 HSPA1LP34931 641 aa30.56■■■□□ 2.48
UBE2D3-220ENST00000505307 UNC13BO14795 1591 aa30.56■■■□□ 2.48
UBE2D3-220ENST00000505307 HDGFP51858 240 aaKnown RBP30.52■■■□□ 2.48
UBE2D3-220ENST00000505307 GCC2Q8IWJ2 1684 aa30.52■■■□□ 2.48
UBE2D3-220ENST00000505307 ALKQ9UM73 1620 aa30.5■■■□□ 2.47
UBE2D3-220ENST00000505307 KCNA6P17658 529 aa30.48■■■□□ 2.47
UBE2D3-220ENST00000505307 ITGAEP38570 1179 aa30.48■■■□□ 2.47
UBE2D3-220ENST00000505307 PPARGC1BQ86YN6 1023 aaKnown RBP30.47■■■□□ 2.47
UBE2D3-220ENST00000505307 NUP155O75694 1391 aa30.45■■■□□ 2.47
UBE2D3-220ENST00000505307 IQGAP3Q86VI3 1631 aa30.45■■■□□ 2.47
UBE2D3-220ENST00000505307 SOCS7O14512 581 aa30.45■■■□□ 2.47
UBE2D3-220ENST00000505307 SLC26A8Q96RN1 970 aa30.45■■■□□ 2.47
UBE2D3-220ENST00000505307 BCANQ96GW7 911 aa30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms