RNA–Protein interactions for RNA: ENST00000505187.5

SPOCK3-208, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2

Gene SPOCK3, Length 1,588 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-208ENST00000505187 REREQ9P2R6 1566 aa31.09■■■□□ 2.57
SPOCK3-208ENST00000505187 YEATS2Q9ULM3 1422 aa31.09■■■□□ 2.57
SPOCK3-208ENST00000505187 ZEB1P37275 1124 aaPredicted RBP31.09■■■□□ 2.57
SPOCK3-208ENST00000505187 IQGAP3Q86VI3 1631 aa31.07■■■□□ 2.56
SPOCK3-208ENST00000505187 RNF17Q9BXT8 1623 aaKnown RBP31.06■■■□□ 2.56
SPOCK3-208ENST00000505187 ARHGEF40Q8TER5 1519 aa31.06■■■□□ 2.56
SPOCK3-208ENST00000505187 NUP155O75694 1391 aa31.05■■■□□ 2.56
SPOCK3-208ENST00000505187 MPHOSPH9Q99550 1183 aa31.05■■■□□ 2.56
SPOCK3-208ENST00000505187 ATP10AO60312 1499 aa31.04■■■□□ 2.56
SPOCK3-208ENST00000505187 PRDM15P57071 1507 aaPredicted RBP31.02■■■□□ 2.56
SPOCK3-208ENST00000505187 FAM135AQ9P2D6 1515 aa31.02■■■□□ 2.56
SPOCK3-208ENST00000505187 MROH1Q8NDA8 1641 aa31■■■□□ 2.55
SPOCK3-208ENST00000505187 SLC4A1APQ9BWU0 796 aaKnown RBP30.99■■■□□ 2.55
SPOCK3-208ENST00000505187 VWDEQ8N2E2 1590 aa30.98■■■□□ 2.55
SPOCK3-208ENST00000505187 KIF3BO15066 747 aa30.97■■■□□ 2.55
SPOCK3-208ENST00000505187 AGLP35573 1532 aa30.97■■■□□ 2.55
SPOCK3-208ENST00000505187 KANK1Q14678 1352 aa30.94■■■□□ 2.54
SPOCK3-208ENST00000505187 TET3O43151 1660 aa30.91■■■□□ 2.54
SPOCK3-208ENST00000505187 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.9■■■□□ 2.54
SPOCK3-208ENST00000505187 LMTK2Q8IWU2 1503 aa30.88■■■□□ 2.53
SPOCK3-208ENST00000505187 PKD2Q13563 968 aa30.86■■■□□ 2.53
SPOCK3-208ENST00000505187 ZC3H13Q5T200 1668 aaKnown RBP30.85■■■□□ 2.53
SPOCK3-208ENST00000505187 ANKRD30BQ9BXX2 1392 aa30.84■■■□□ 2.53
SPOCK3-208ENST00000505187 CEP152O94986 1710 aa30.83■■■□□ 2.53
SPOCK3-208ENST00000505187 SIGLEC1Q9BZZ2 1709 aa30.82■■■□□ 2.52
SPOCK3-208ENST00000505187 E9PCH4 1651 aa30.8■■■□□ 2.52
SPOCK3-208ENST00000505187 EFCAB6Q5THR3 1501 aa30.77■■■□□ 2.52
SPOCK3-208ENST00000505187 GGT6Q6P531 493 aa30.77■■■□□ 2.52
SPOCK3-208ENST00000505187 ABCC3O15438 1527 aa30.77■■■□□ 2.52
SPOCK3-208ENST00000505187 FOXD1Q16676 465 aa30.76■■■□□ 2.52
SPOCK3-208ENST00000505187 PPP6R1Q9UPN7 881 aa30.76■■■□□ 2.52
SPOCK3-208ENST00000505187 TIMELESSQ9UNS1 1208 aa30.75■■■□□ 2.51
SPOCK3-208ENST00000505187 SIN3AQ96ST3 1273 aa30.74■■■□□ 2.51
SPOCK3-208ENST00000505187 CAMSAP1Q5T5Y3 1602 aa30.73■■■□□ 2.51
SPOCK3-208ENST00000505187 RPRD2Q5VT52 1461 aaKnown RBP30.71■■■□□ 2.51
SPOCK3-208ENST00000505187 SPHKAPQ2M3C7 1700 aa30.71■■■□□ 2.51
SPOCK3-208ENST00000505187 WASHC2CQ9Y4E1 1318 aa30.68■■■□□ 2.5
SPOCK3-208ENST00000505187 ARHGAP31Q2M1Z3 1444 aa30.66■■■□□ 2.5
SPOCK3-208ENST00000505187 NEUROD1Q13562 356 aa30.66■■■□□ 2.5
SPOCK3-208ENST00000505187 PTPRTO14522 1441 aa30.65■■■□□ 2.5
SPOCK3-208ENST00000505187 PLA2R1Q13018 1463 aa30.65■■■□□ 2.5
SPOCK3-208ENST00000505187 TRPM2O94759 1503 aa30.64■■■□□ 2.5
SPOCK3-208ENST00000505187 TONSLQ96HA7 1378 aa30.6■■■□□ 2.49
SPOCK3-208ENST00000505187 NPATQ14207 1427 aa30.6■■■□□ 2.49
SPOCK3-208ENST00000505187 CLTCQ00610 1675 aaKnown RBP30.6■■■□□ 2.49
SPOCK3-208ENST00000505187 CCDC144AA2RUR9 1427 aa30.59■■■□□ 2.49
SPOCK3-208ENST00000505187 ARID4BQ4LE39 1312 aaPredicted RBP30.57■■■□□ 2.49
SPOCK3-208ENST00000505187 CFAP65Q6ZU64 1925 aaKnown RBP30.56■■■□□ 2.48
SPOCK3-208ENST00000505187 MROH2AA6NES4 1674 aa30.53■■■□□ 2.48
SPOCK3-208ENST00000505187 CNTLNQ9NXG0 1405 aa30.53■■■□□ 2.48
SPOCK3-208ENST00000505187 MLECQ14165 292 aa30.51■■■□□ 2.47
SPOCK3-208ENST00000505187 PREX1Q8TCU6 1659 aa30.51■■■□□ 2.47
SPOCK3-208ENST00000505187 NOS1P29475 1434 aa30.51■■■□□ 2.47
SPOCK3-208ENST00000505187 CLTCL1P53675 1640 aa30.51■■■□□ 2.47
SPOCK3-208ENST00000505187 NEURL4Q96JN8 1562 aa30.48■■■□□ 2.47
SPOCK3-208ENST00000505187 ESF1Q9H501 851 aaKnown RBP30.47■■■□□ 2.47
SPOCK3-208ENST00000505187 FER1L4A9Z1Z3 1794 aa30.47■■■□□ 2.47
SPOCK3-208ENST00000505187 KIF1BO60333 1816 aa30.47■■■□□ 2.47
SPOCK3-208ENST00000505187 PIK3C2BO00750 1634 aa30.44■■■□□ 2.46
SPOCK3-208ENST00000505187 SYNMO15061 1565 aa30.43■■■□□ 2.46
SPOCK3-208ENST00000505187 PPP1R15AO75807 674 aaPredicted RBP30.43■■■□□ 2.46
SPOCK3-208ENST00000505187 L3MBTL2Q969R5 705 aa30.41■■■□□ 2.46
SPOCK3-208ENST00000505187 ERVK-7P63135 1459 aa30.41■■■□□ 2.46
SPOCK3-208ENST00000505187 SPATA31D1Q6ZQQ2 1576 aa30.41■■■□□ 2.46
SPOCK3-208ENST00000505187 SPATA31E1Q6ZUB1 1445 aa30.39■■■□□ 2.46
SPOCK3-208ENST00000505187 ZMYM3Q14202 1370 aa30.39■■■□□ 2.45
SPOCK3-208ENST00000505187 UGGT1Q9NYU2 1555 aa30.37■■■□□ 2.45
SPOCK3-208ENST00000505187 ADAMTSL3P82987 1691 aa30.35■■■□□ 2.45
SPOCK3-208ENST00000505187 SLC52A1Q9NWF4 448 aa30.33■■■□□ 2.45
SPOCK3-208ENST00000505187 ADGRB3O60242 1522 aa30.32■■■□□ 2.44
SPOCK3-208ENST00000505187 C3P01024 1663 aa30.32■■■□□ 2.44
SPOCK3-208ENST00000505187 MADDQ8WXG6 1647 aa30.3■■■□□ 2.44
SPOCK3-208ENST00000505187 FBXO31Q5XUX0 539 aaPredicted RBP30.28■■■□□ 2.44
SPOCK3-208ENST00000505187 UHRF1BP1Q6BDS2 1440 aa30.27■■■□□ 2.44
SPOCK3-208ENST00000505187 STAC3Q96MF2 364 aa30.26■■■□□ 2.43
SPOCK3-208ENST00000505187 RIMS1Q86UR5 1692 aaKnown RBP30.26■■■□□ 2.43
SPOCK3-208ENST00000505187 IFT172Q9UG01 1749 aa30.25■■■□□ 2.43
SPOCK3-208ENST00000505187 RGL3Q3MIN7 710 aa30.23■■■□□ 2.43
SPOCK3-208ENST00000505187 TMEM131LA2VDJ0 1609 aa30.21■■■□□ 2.43
SPOCK3-208ENST00000505187 IDI1Q13907 227 aa30.21■■■□□ 2.43
SPOCK3-208ENST00000505187 DCAF11Q8TEB1 546 aa30.21■■■□□ 2.43
SPOCK3-208ENST00000505187 MYO5BQ9ULV0 1848 aa30.2■■■□□ 2.43
SPOCK3-208ENST00000505187 TNRQ92752 1358 aa30.2■■■□□ 2.42
SPOCK3-208ENST00000505187 KDM5AP29375 1690 aaKnown RBP30.19■■■□□ 2.42
SPOCK3-208ENST00000505187 PPLO60437 1756 aa30.19■■■□□ 2.42
SPOCK3-208ENST00000505187 RPGRIP1LQ68CZ1 1315 aa30.17■■■□□ 2.42
SPOCK3-208ENST00000505187 MYOM2P54296 1465 aa30.17■■■□□ 2.42
SPOCK3-208ENST00000505187 PRAG1Q86YV5 1406 aa30.15■■■□□ 2.42
SPOCK3-208ENST00000505187 NBPF8Q3BBV2 869 aa30.15■■■□□ 2.42
SPOCK3-208ENST00000505187 NLRP1Q9C000 1473 aa30.13■■■□□ 2.41
SPOCK3-208ENST00000505187 CHGAP10645 457 aaKnown RBP30.12■■■□□ 2.41
SPOCK3-208ENST00000505187 KDM2AQ9Y2K7 1162 aa30.12■■■□□ 2.41
SPOCK3-208ENST00000505187 RALGAPBQ86X10 1494 aa30.12■■■□□ 2.41
SPOCK3-208ENST00000505187 TRPM1Q7Z4N2 1603 aa30.11■■■□□ 2.41
SPOCK3-208ENST00000505187 SETD1BQ9UPS6 1966 aaKnown RBP30.1■■■□□ 2.41
SPOCK3-208ENST00000505187 NEXMIFQ5QGS0 1516 aa30.09■■■□□ 2.41
SPOCK3-208ENST00000505187 CEBPAP49715 358 aaPredicted RBP30.08■■■□□ 2.41
SPOCK3-208ENST00000505187 ZNF326Q5BKZ1 582 aaKnown RBP30.08■■■□□ 2.41
SPOCK3-208ENST00000505187 KIAA1210Q9ULL0 1709 aa30.08■■■□□ 2.41
SPOCK3-208ENST00000505187 NRXN1Q9ULB1 1477 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms