RNA–Protein interactions for RNA: ENST00000505016.2

MATR3-234, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-234ENST00000505016 CLTCQ00610 1675 aaKnown RBP19.52■□□□□ 0.72
MATR3-234ENST00000505016 ADGBQ8N7X0 1667 aa19.52■□□□□ 0.72
MATR3-234ENST00000505016 NPATQ14207 1427 aa19.51■□□□□ 0.71
MATR3-234ENST00000505016 GGT6Q6P531 493 aa19.5■□□□□ 0.71
MATR3-234ENST00000505016 SPINK5Q9NQ38 1064 aaPredicted RBP19.5■□□□□ 0.71
MATR3-234ENST00000505016 RTEL1-TNFRSF6BF6WH68 1400 aa19.5■□□□□ 0.71
MATR3-234ENST00000505016 CAMSAP2Q08AD1 1489 aa19.48■□□□□ 0.71
MATR3-234ENST00000505016 PTPRTO14522 1441 aa19.47■□□□□ 0.71
MATR3-234ENST00000505016 VPS8Q8N3P4 1428 aa19.47■□□□□ 0.71
MATR3-234ENST00000505016 CCDC141Q6ZP82 1450 aa19.47■□□□□ 0.71
MATR3-234ENST00000505016 NCOA1Q15788 1441 aa19.46■□□□□ 0.71
MATR3-234ENST00000505016 DHX29Q7Z478 1369 aaKnown RBP19.45■□□□□ 0.7
MATR3-234ENST00000505016 MYCNP04198 464 aaPredicted RBP19.45■□□□□ 0.7
MATR3-234ENST00000505016 PTPRKQ15262 1439 aa19.44■□□□□ 0.7
MATR3-234ENST00000505016 LRRC9Q6ZRR7 1453 aa19.44■□□□□ 0.7
MATR3-234ENST00000505016 CAMSAP1Q5T5Y3 1602 aa19.43■□□□□ 0.7
MATR3-234ENST00000505016 MYO3AQ8NEV4 1616 aa19.43■□□□□ 0.7
MATR3-234ENST00000505016 ZNF142P52746 1687 aaPredicted RBP19.4■□□□□ 0.7
MATR3-234ENST00000505016 RSPH4AQ5TD94 716 aa19.4■□□□□ 0.7
MATR3-234ENST00000505016 ARHGEF5Q12774 1597 aa19.4■□□□□ 0.7
MATR3-234ENST00000505016 KIF3BO15066 747 aa19.39■□□□□ 0.69
MATR3-234ENST00000505016 KANK4Q5T7N3 995 aaPredicted RBP19.39■□□□□ 0.69
MATR3-234ENST00000505016 CEP170BQ9Y4F5 1589 aaPredicted RBP19.39■□□□□ 0.69
MATR3-234ENST00000505016 LTBP4Q8N2S1 1624 aa19.37■□□□□ 0.69
MATR3-234ENST00000505016 NCKAP5LQ9HCH0 1330 aa19.37■□□□□ 0.69
MATR3-234ENST00000505016 MAP3K1Q13233 1512 aa19.36■□□□□ 0.69
MATR3-234ENST00000505016 CAPN15O75808 1086 aa19.35■□□□□ 0.69
MATR3-234ENST00000505016 TSPY4P0CV99 314 aa19.34■□□□□ 0.69
MATR3-234ENST00000505016 TSPY10P0CW01 314 aa19.34■□□□□ 0.69
MATR3-234ENST00000505016 SAMD1Q6SPF0 538 aaPredicted RBP19.34■□□□□ 0.69
MATR3-234ENST00000505016 KDM5DQ9BY66 1539 aa19.34■□□□□ 0.69
MATR3-234ENST00000505016 PLA2R1Q13018 1463 aa19.34■□□□□ 0.69
MATR3-234ENST00000505016 FBXO31Q5XUX0 539 aaPredicted RBP19.33■□□□□ 0.68
MATR3-234ENST00000505016 FAM135AQ9P2D6 1515 aa19.32■□□□□ 0.68
MATR3-234ENST00000505016 A2ML1A8K2U0 1454 aa19.32■□□□□ 0.68
MATR3-234ENST00000505016 TCOF1Q13428 1488 aaKnown RBP19.32■□□□□ 0.68
MATR3-234ENST00000505016 PZPP20742 1482 aa19.31■□□□□ 0.68
MATR3-234ENST00000505016 PKD2Q13563 968 aa19.31■□□□□ 0.68
MATR3-234ENST00000505016 DNMT1P26358 1616 aaKnown RBP19.31■□□□□ 0.68
MATR3-234ENST00000505016 MYOM3Q5VTT5 1437 aa19.31■□□□□ 0.68
MATR3-234ENST00000505016 MAST1Q9Y2H9 1570 aa19.31■□□□□ 0.68
MATR3-234ENST00000505016 WASHC2CQ9Y4E1 1318 aa19.3■□□□□ 0.68
MATR3-234ENST00000505016 TNRQ92752 1358 aa19.3■□□□□ 0.68
MATR3-234ENST00000505016 MIA2Q96PC5 1412 aa19.29■□□□□ 0.68
MATR3-234ENST00000505016 ZNF335Q9H4Z2 1342 aaPredicted RBP19.27■□□□□ 0.68
MATR3-234ENST00000505016 RNF17Q9BXT8 1623 aaKnown RBP19.26■□□□□ 0.67
MATR3-234ENST00000505016 IQSEC2Q5JU85 1478 aa19.26■□□□□ 0.67
MATR3-234ENST00000505016 EIF2AK4Q9P2K8 1649 aaKnown RBP19.23■□□□□ 0.67
MATR3-234ENST00000505016 APLP2Q06481 763 aa19.23■□□□□ 0.67
MATR3-234ENST00000505016 ABCC3O15438 1527 aa19.22■□□□□ 0.67
MATR3-234ENST00000505016 MROH1Q8NDA8 1641 aa19.22■□□□□ 0.67
MATR3-234ENST00000505016 NEURL4Q96JN8 1562 aa19.21■□□□□ 0.67
MATR3-234ENST00000505016 POLR1AO95602 1720 aaPredicted RBP19.2■□□□□ 0.66
MATR3-234ENST00000505016 ZC3H13Q5T200 1668 aaKnown RBP19.2■□□□□ 0.66
MATR3-234ENST00000505016 PTPN23Q9H3S7 1636 aa19.19■□□□□ 0.66
MATR3-234ENST00000505016 NLRP1Q9C000 1473 aa19.19■□□□□ 0.66
MATR3-234ENST00000505016 DUOX2Q9NRD8 1548 aa19.19■□□□□ 0.66
MATR3-234ENST00000505016 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.19■□□□□ 0.665e-19■■□□□ 13.5
MATR3-234ENST00000505016 ABCC5O15440 1437 aa19.18■□□□□ 0.66
MATR3-234ENST00000505016 DSG3P32926 999 aa19.18■□□□□ 0.66
MATR3-234ENST00000505016 CROCC2H7BZ55 1655 aa19.17■□□□□ 0.66
MATR3-234ENST00000505016 SPATA31D1Q6ZQQ2 1576 aa19.17■□□□□ 0.66
MATR3-234ENST00000505016 UGGT1Q9NYU2 1555 aa19.17■□□□□ 0.66
MATR3-234ENST00000505016 CEP152O94986 1710 aa19.17■□□□□ 0.66
MATR3-234ENST00000505016 SHANK2Q9UPX8 1470 aa19.16■□□□□ 0.66
MATR3-234ENST00000505016 THEMISQ8N1K5 641 aaPredicted RBP19.16■□□□□ 0.66
MATR3-234ENST00000505016 KIF15Q9NS87 1388 aa19.16■□□□□ 0.66
MATR3-234ENST00000505016 ERVK-7P63135 1459 aa19.16■□□□□ 0.66
MATR3-234ENST00000505016 ANKLE2Q86XL3 938 aa19.15■□□□□ 0.66
MATR3-234ENST00000505016 FGD6Q6ZV73 1430 aa19.15■□□□□ 0.66
MATR3-234ENST00000505016 RRP7BPQ9NSQ0 103 aa19.14■□□□□ 0.65
MATR3-234ENST00000505016 DAPK1P53355 1430 aa19.14■□□□□ 0.65
MATR3-234ENST00000505016 UBAP1LF5GYI3 381 aa19.13■□□□□ 0.65
MATR3-234ENST00000505016 ATF5Q9Y2D1 282 aaPredicted RBP19.12■□□□□ 0.65
MATR3-234ENST00000505016 DEPDC5O75140 1603 aa19.11■□□□□ 0.65
MATR3-234ENST00000505016 PRDM15P57071 1507 aaPredicted RBP19.11■□□□□ 0.65
MATR3-234ENST00000505016 ERBINQ96RT1 1412 aa19.11■□□□□ 0.65
MATR3-234ENST00000505016 MED14O60244 1454 aa19.1■□□□□ 0.65
MATR3-234ENST00000505016 NPHP4O75161 1426 aaPredicted RBP19.1■□□□□ 0.65
MATR3-234ENST00000505016 DISP3Q9P2K9 1392 aa19.1■□□□□ 0.65
MATR3-234ENST00000505016 ZNF219Q9P2Y4 722 aaPredicted RBP19.1■□□□□ 0.65
MATR3-234ENST00000505016 CFAP65Q6ZU64 1925 aaKnown RBP19.09■□□□□ 0.65
MATR3-234ENST00000505016 VWDEQ8N2E2 1590 aa19.09■□□□□ 0.65
MATR3-234ENST00000505016 CHIC2Q9UKJ5 165 aa19.08■□□□□ 0.64
MATR3-234ENST00000505016 CPS1P31327 1500 aa19.08■□□□□ 0.64
MATR3-234ENST00000505016 ARHGAP31Q2M1Z3 1444 aa19.07■□□□□ 0.64
MATR3-234ENST00000505016 UBR1Q8IWV7 1749 aa19.06■□□□□ 0.64
MATR3-234ENST00000505016 IQGAP1P46940 1657 aa19.06■□□□□ 0.64
MATR3-234ENST00000505016 ANKRD30AQ9BXX3 1397 aa19.04■□□□□ 0.64
MATR3-234ENST00000505016 ILDR2Q71H61 639 aa19.03■□□□□ 0.64
MATR3-234ENST00000505016 KANK1Q14678 1352 aa19.01■□□□□ 0.63
MATR3-234ENST00000505016 STRCP1A6NGW2 1772 aa19■□□□□ 0.63
MATR3-234ENST00000505016 ADGRL2O95490 1459 aa18.99■□□□□ 0.63
MATR3-234ENST00000505016 SCAF11Q99590 1463 aaKnown RBP18.99■□□□□ 0.63
MATR3-234ENST00000505016 ARHGAP23Q9P227 1491 aa18.99■□□□□ 0.63
MATR3-234ENST00000505016 ABCB7O75027 752 aa18.99■□□□□ 0.63
MATR3-234ENST00000505016 LTKP29376 864 aa18.99■□□□□ 0.63
MATR3-234ENST00000505016 PIK3C2BO00750 1634 aa18.99■□□□□ 0.63
MATR3-234ENST00000505016 SLIT1O75093 1534 aa18.99■□□□□ 0.63
MATR3-234ENST00000505016 LMTK2Q8IWU2 1503 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms