RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 NCOA1Q15788 1441 aa30.9■■■□□ 2.54
HERC6-205ENST00000504905 LTBP4Q8N2S1 1624 aa30.88■■■□□ 2.53
HERC6-205ENST00000504905 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.88■■■□□ 2.53
HERC6-205ENST00000504905 KIF15Q9NS87 1388 aa30.88■■■□□ 2.53
HERC6-205ENST00000504905 NPATQ14207 1427 aa30.88■■■□□ 2.53
HERC6-205ENST00000504905 DUOX2Q9NRD8 1548 aa30.88■■■□□ 2.53
HERC6-205ENST00000504905 MROH2AA6NES4 1674 aa30.87■■■□□ 2.53
HERC6-205ENST00000504905 ANKRD30AQ9BXX3 1397 aa30.87■■■□□ 2.53
HERC6-205ENST00000504905 DISP3Q9P2K9 1392 aa30.87■■■□□ 2.53
HERC6-205ENST00000504905 RRBP1Q9P2E9 1410 aaKnown RBP30.87■■■□□ 2.53
HERC6-205ENST00000504905 KIF3BO15066 747 aa30.86■■■□□ 2.53
HERC6-205ENST00000504905 GGT6Q6P531 493 aa30.86■■■□□ 2.53
HERC6-205ENST00000504905 RRP7BPQ9NSQ0 103 aa30.85■■■□□ 2.53
HERC6-205ENST00000504905 ADGRL2O95490 1459 aa30.83■■■□□ 2.53
HERC6-205ENST00000504905 IQSEC2Q5JU85 1478 aa30.83■■■□□ 2.53
HERC6-205ENST00000504905 ZMYM3Q14202 1370 aa30.83■■■□□ 2.53
HERC6-205ENST00000504905 EIF2AK4Q9P2K8 1649 aaKnown RBP30.83■■■□□ 2.53
HERC6-205ENST00000504905 ILDR2Q71H61 639 aa30.8■■■□□ 2.52
HERC6-205ENST00000504905 ITGAEP38570 1179 aa30.79■■■□□ 2.52
HERC6-205ENST00000504905 CAMSAP1Q5T5Y3 1602 aa30.79■■■□□ 2.52
HERC6-205ENST00000504905 PTPRKQ15262 1439 aa30.79■■■□□ 2.52
HERC6-205ENST00000504905 CLTCQ00610 1675 aaKnown RBP30.78■■■□□ 2.52
HERC6-205ENST00000504905 ERBINQ96RT1 1412 aa30.77■■■□□ 2.52
HERC6-205ENST00000504905 PPP6R1Q9UPN7 881 aa30.77■■■□□ 2.52
HERC6-205ENST00000504905 RNF17Q9BXT8 1623 aaKnown RBP30.76■■■□□ 2.52
HERC6-205ENST00000504905 SOCS7O14512 581 aa30.72■■■□□ 2.51
HERC6-205ENST00000504905 ROCK1Q13464 1354 aa30.71■■■□□ 2.51
HERC6-205ENST00000504905 FAM135AQ9P2D6 1515 aa30.71■■■□□ 2.51
HERC6-205ENST00000504905 KDM5DQ9BY66 1539 aa30.69■■■□□ 2.5
HERC6-205ENST00000504905 SPATA31D1Q6ZQQ2 1576 aa30.68■■■□□ 2.5
HERC6-205ENST00000504905 PLA2R1Q13018 1463 aa30.68■■■□□ 2.5
HERC6-205ENST00000504905 NCKAP5LQ9HCH0 1330 aa30.68■■■□□ 2.5
HERC6-205ENST00000504905 ZNF142P52746 1687 aaPredicted RBP30.68■■■□□ 2.5
HERC6-205ENST00000504905 MROH1Q8NDA8 1641 aa30.66■■■□□ 2.5
HERC6-205ENST00000504905 MYO3AQ8NEV4 1616 aa30.66■■■□□ 2.5
HERC6-205ENST00000504905 PKD2Q13563 968 aa30.66■■■□□ 2.5
HERC6-205ENST00000504905 WASHC2CQ9Y4E1 1318 aa30.66■■■□□ 2.5
HERC6-205ENST00000504905 ANKRD50Q9ULJ7 1429 aa30.64■■■□□ 2.5
HERC6-205ENST00000504905 ZC3H13Q5T200 1668 aaKnown RBP30.64■■■□□ 2.5
HERC6-205ENST00000504905 CEP170BQ9Y4F5 1589 aaPredicted RBP30.63■■■□□ 2.49
HERC6-205ENST00000504905 DEPDC5O75140 1603 aa30.63■■■□□ 2.49
HERC6-205ENST00000504905 ZNF335Q9H4Z2 1342 aaPredicted RBP30.62■■■□□ 2.49
HERC6-205ENST00000504905 PRDM15P57071 1507 aaPredicted RBP30.62■■■□□ 2.49
HERC6-205ENST00000504905 CEP152O94986 1710 aa30.59■■■□□ 2.49
HERC6-205ENST00000504905 ABCC3O15438 1527 aa30.59■■■□□ 2.49
HERC6-205ENST00000504905 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.58■■■□□ 2.49
HERC6-205ENST00000504905 KANK1Q14678 1352 aa30.56■■■□□ 2.48
HERC6-205ENST00000504905 UBAP1LF5GYI3 381 aa30.53■■■□□ 2.48
HERC6-205ENST00000504905 PZPP20742 1482 aa30.52■■■□□ 2.48
HERC6-205ENST00000504905 A2ML1A8K2U0 1454 aa30.5■■■□□ 2.47
HERC6-205ENST00000504905 GCC2Q8IWJ2 1684 aa30.49■■■□□ 2.47
HERC6-205ENST00000504905 VWDEQ8N2E2 1590 aa30.49■■■□□ 2.47
HERC6-205ENST00000504905 UNC13BO14795 1591 aa30.48■■■□□ 2.47
HERC6-205ENST00000504905 NAIPQ13075 1403 aa30.45■■■□□ 2.46
HERC6-205ENST00000504905 LMTK2Q8IWU2 1503 aa30.43■■■□□ 2.46
HERC6-205ENST00000504905 FBXO31Q5XUX0 539 aaPredicted RBP30.43■■■□□ 2.46
HERC6-205ENST00000504905 CFAP65Q6ZU64 1925 aaKnown RBP30.42■■■□□ 2.46
HERC6-205ENST00000504905 HFM1A2PYH4 1435 aa30.42■■■□□ 2.46
HERC6-205ENST00000504905 TNRQ92752 1358 aa30.4■■■□□ 2.46
HERC6-205ENST00000504905 ARHGAP31Q2M1Z3 1444 aa30.39■■■□□ 2.46
HERC6-205ENST00000504905 EFCAB6Q5THR3 1501 aa30.37■■■□□ 2.45
HERC6-205ENST00000504905 ERVK-7P63135 1459 aa30.36■■■□□ 2.45
HERC6-205ENST00000504905 IQGAP3Q86VI3 1631 aa30.36■■■□□ 2.45
HERC6-205ENST00000504905 TET3O43151 1660 aa30.36■■■□□ 2.45
HERC6-205ENST00000504905 POLR1AO95602 1720 aaPredicted RBP30.36■■■□□ 2.45
HERC6-205ENST00000504905 NEURL4Q96JN8 1562 aa30.35■■■□□ 2.45
HERC6-205ENST00000504905 NUP155O75694 1391 aa30.34■■■□□ 2.45
HERC6-205ENST00000504905 CPS1P31327 1500 aa30.33■■■□□ 2.45
HERC6-205ENST00000504905 NLRP1Q9C000 1473 aa30.28■■■□□ 2.44
HERC6-205ENST00000504905 ANKLE2Q86XL3 938 aa30.28■■■□□ 2.44
HERC6-205ENST00000504905 THEMISQ8N1K5 641 aaPredicted RBP30.28■■■□□ 2.44
HERC6-205ENST00000504905 RPRD2Q5VT52 1461 aaKnown RBP30.27■■■□□ 2.44
HERC6-205ENST00000504905 TOM1O60784 492 aa30.27■■■□□ 2.44
HERC6-205ENST00000504905 E9PCH4 1651 aa30.24■■■□□ 2.43
HERC6-205ENST00000504905 HSPA1LP34931 641 aa30.24■■■□□ 2.43
HERC6-205ENST00000504905 MED14O60244 1454 aa30.23■■■□□ 2.43
HERC6-205ENST00000504905 PIP4K2BP78356 416 aa30.22■■■□□ 2.43
HERC6-205ENST00000504905 UGGT1Q9NYU2 1555 aa30.22■■■□□ 2.43
HERC6-205ENST00000504905 SCAF1Q9H7N4 1312 aaKnown RBP30.22■■■□□ 2.43
HERC6-205ENST00000504905 TRIM52Q96A61 297 aa30.21■■■□□ 2.43
HERC6-205ENST00000504905 NPHP4O75161 1426 aaPredicted RBP30.19■■■□□ 2.42
HERC6-205ENST00000504905 NOS1P29475 1434 aa30.19■■■□□ 2.42
HERC6-205ENST00000504905 SETD5Q9C0A6 1442 aa30.19■■■□□ 2.42
HERC6-205ENST00000504905 SYNMO15061 1565 aa30.18■■■□□ 2.42
HERC6-205ENST00000504905 MED1Q15648 1581 aaPredicted RBP30.15■■■□□ 2.42
HERC6-205ENST00000504905 PIK3C2BO00750 1634 aa30.12■■■□□ 2.41
HERC6-205ENST00000504905 UBR1Q8IWV7 1749 aa30.12■■■□□ 2.41
HERC6-205ENST00000504905 IQGAP1P46940 1657 aa30.11■■■□□ 2.41
HERC6-205ENST00000504905 ALKQ9UM73 1620 aa30.1■■■□□ 2.41
HERC6-205ENST00000504905 SLC52A1Q9NWF4 448 aa30.09■■■□□ 2.41
HERC6-205ENST00000504905 ACIN1Q9UKV3 1341 aaKnown RBP30.09■■■□□ 2.41
HERC6-205ENST00000504905 RAB3GAP2Q9H2M9 1393 aa30.08■■■□□ 2.41
HERC6-205ENST00000504905 IDI1Q13907 227 aa30.08■■■□□ 2.41
HERC6-205ENST00000504905 SPHKAPQ2M3C7 1700 aa30.08■■■□□ 2.41
HERC6-205ENST00000504905 SLC4A1APQ9BWU0 796 aaKnown RBP30.07■■■□□ 2.4
HERC6-205ENST00000504905 STAG3Q9UJ98 1225 aa30.06■■■□□ 2.4
HERC6-205ENST00000504905 KDM5AP29375 1690 aaKnown RBP30.06■■■□□ 2.4
HERC6-205ENST00000504905 STRCP1A6NGW2 1772 aa30.03■■■□□ 2.4
HERC6-205ENST00000504905 ADGRB3O60242 1522 aa30.02■■■□□ 2.4
HERC6-205ENST00000504905 LRRC7Q96NW7 1537 aa30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms