RNA–Protein interactions for RNA: ENST00000504805.6

RUFY3-207, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 5

Gene RUFY3, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-207ENST00000504805 KIAA1107Q9UPP5 1409 aa11.24□□□□□ -0.61
RUFY3-207ENST00000504805 CAMSAP2Q08AD1 1489 aa11.24□□□□□ -0.61
RUFY3-207ENST00000504805 CAMSAP1Q5T5Y3 1602 aa11.24□□□□□ -0.61
RUFY3-207ENST00000504805 SOCS7O14512 581 aa11.23□□□□□ -0.61
RUFY3-207ENST00000504805 PLXNC1O60486 1568 aa11.23□□□□□ -0.61
RUFY3-207ENST00000504805 MYCNP04198 464 aaPredicted RBP11.22□□□□□ -0.61
RUFY3-207ENST00000504805 HOXD11P31277 338 aaPredicted RBP11.22□□□□□ -0.61
RUFY3-207ENST00000504805 CNTLNQ9NXG0 1405 aa11.22□□□□□ -0.61
RUFY3-207ENST00000504805 INO80Q9ULG1 1556 aaPredicted RBP11.22□□□□□ -0.61
RUFY3-207ENST00000504805 DMRT2Q9Y5R5 561 aa11.22□□□□□ -0.61
RUFY3-207ENST00000504805 CLTCQ00610 1675 aaKnown RBP11.2□□□□□ -0.62
RUFY3-207ENST00000504805 NPATQ14207 1427 aa11.2□□□□□ -0.62
RUFY3-207ENST00000504805 ZNF644Q9H582 1327 aaPredicted RBP11.2□□□□□ -0.62
RUFY3-207ENST00000504805 PTPN23Q9H3S7 1636 aa11.2□□□□□ -0.62
RUFY3-207ENST00000504805 CCDC141Q6ZP82 1450 aa11.19□□□□□ -0.62
RUFY3-207ENST00000504805 FGD6Q6ZV73 1430 aa11.19□□□□□ -0.62
RUFY3-207ENST00000504805 HNRNPMP52272 730 aaKnown RBP eCLIP11.19□□□□□ -0.62
RUFY3-207ENST00000504805 MYT1LQ9UL68 1186 aa11.19□□□□□ -0.62
RUFY3-207ENST00000504805 ARHGEF5Q12774 1597 aa11.19□□□□□ -0.62
RUFY3-207ENST00000504805 CEP170BQ9Y4F5 1589 aaPredicted RBP11.19□□□□□ -0.62
RUFY3-207ENST00000504805 MBD5Q9P267 1494 aa11.19□□□□□ -0.62
RUFY3-207ENST00000504805 ATP7AQ04656 1500 aa11.18□□□□□ -0.62
RUFY3-207ENST00000504805 TCOF1Q13428 1488 aaKnown RBP11.18□□□□□ -0.62
RUFY3-207ENST00000504805 RSPH4AQ5TD94 716 aa11.17□□□□□ -0.62
RUFY3-207ENST00000504805 PLA2R1Q13018 1463 aa11.17□□□□□ -0.62
RUFY3-207ENST00000504805 SPAG9O60271 1321 aaKnown RBP11.16□□□□□ -0.62
RUFY3-207ENST00000504805 PPARGC1BQ86YN6 1023 aaKnown RBP11.15□□□□□ -0.62
RUFY3-207ENST00000504805 POLR1AO95602 1720 aaPredicted RBP11.15□□□□□ -0.63
RUFY3-207ENST00000504805 CROCC2H7BZ55 1655 aa11.14□□□□□ -0.63
RUFY3-207ENST00000504805 ADGBQ8N7X0 1667 aa11.14□□□□□ -0.63
RUFY3-207ENST00000504805 RTEL1-TNFRSF6BF6WH68 1400 aa11.14□□□□□ -0.63
RUFY3-207ENST00000504805 PTPRKQ15262 1439 aa11.14□□□□□ -0.63
RUFY3-207ENST00000504805 DNMT1P26358 1616 aaKnown RBP11.13□□□□□ -0.63
RUFY3-207ENST00000504805 ZNF335Q9H4Z2 1342 aaPredicted RBP11.13□□□□□ -0.63
RUFY3-207ENST00000504805 NEURL4Q96JN8 1562 aa11.13□□□□□ -0.63
RUFY3-207ENST00000504805 MAST1Q9Y2H9 1570 aa11.13□□□□□ -0.63
RUFY3-207ENST00000504805 ZMYM3Q14202 1370 aa11.13□□□□□ -0.63
RUFY3-207ENST00000504805 TSPY4P0CV99 314 aa11.12□□□□□ -0.63
RUFY3-207ENST00000504805 TSPY10P0CW01 314 aa11.12□□□□□ -0.63
RUFY3-207ENST00000504805 A2MP01023 1474 aa11.12□□□□□ -0.63
RUFY3-207ENST00000504805 SHANK2Q9UPX8 1470 aa11.12□□□□□ -0.63
RUFY3-207ENST00000504805 DAPK1P53355 1430 aa11.11□□□□□ -0.63
RUFY3-207ENST00000504805 FAM50AQ14320 339 aaKnown RBP11.11□□□□□ -0.63
RUFY3-207ENST00000504805 ESF1Q9H501 851 aaKnown RBP11.11□□□□□ -0.63
RUFY3-207ENST00000504805 MED1Q15648 1581 aaPredicted RBP11.11□□□□□ -0.63
RUFY3-207ENST00000504805 NCKAP5LQ9HCH0 1330 aa11.09□□□□□ -0.63
RUFY3-207ENST00000504805 ABCC5O15440 1437 aa11.09□□□□□ -0.63
RUFY3-207ENST00000504805 A2ML1A8K2U0 1454 aa11.09□□□□□ -0.63
RUFY3-207ENST00000504805 ALKQ9UM73 1620 aa11.09□□□□□ -0.63
RUFY3-207ENST00000504805 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.07□□□□□ -0.64
RUFY3-207ENST00000504805 RRBP1Q9P2E9 1410 aaKnown RBP11.07□□□□□ -0.64
RUFY3-207ENST00000504805 PKD2Q13563 968 aa11.06□□□□□ -0.64
RUFY3-207ENST00000504805 DHX29Q7Z478 1369 aaKnown RBP11.05□□□□□ -0.64
RUFY3-207ENST00000504805 FAM135AQ9P2D6 1515 aa11.05□□□□□ -0.64
RUFY3-207ENST00000504805 UBAP1LF5GYI3 381 aa11.05□□□□□ -0.64
RUFY3-207ENST00000504805 VWDEQ8N2E2 1590 aa11.05□□□□□ -0.64
RUFY3-207ENST00000504805 CPS1P31327 1500 aa11.04□□□□□ -0.64
RUFY3-207ENST00000504805 KDM5DQ9BY66 1539 aa11.04□□□□□ -0.64
RUFY3-207ENST00000504805 DUOX2Q9NRD8 1548 aa11.04□□□□□ -0.64
RUFY3-207ENST00000504805 ANKRD30AQ9BXX3 1397 aa11.04□□□□□ -0.64
RUFY3-207ENST00000504805 EIF2AK4Q9P2K8 1649 aaKnown RBP11.04□□□□□ -0.64
RUFY3-207ENST00000504805 ADGRL2O95490 1459 aa11.04□□□□□ -0.64
RUFY3-207ENST00000504805 KIF15Q9NS87 1388 aa11.03□□□□□ -0.64
RUFY3-207ENST00000504805 PZPP20742 1482 aa11.03□□□□□ -0.64
RUFY3-207ENST00000504805 STRCP1A6NGW2 1772 aa11.03□□□□□ -0.64
RUFY3-207ENST00000504805 DEPDC5O75140 1603 aa11.02□□□□□ -0.64
RUFY3-207ENST00000504805 CHIC2Q9UKJ5 165 aa11.02□□□□□ -0.65
RUFY3-207ENST00000504805 ERBINQ96RT1 1412 aa11.01□□□□□ -0.65
RUFY3-207ENST00000504805 IQGAP1P46940 1657 aa11.01□□□□□ -0.65
RUFY3-207ENST00000504805 RNF17Q9BXT8 1623 aaKnown RBP11□□□□□ -0.65
RUFY3-207ENST00000504805 KIF3BO15066 747 aa11□□□□□ -0.65
RUFY3-207ENST00000504805 ITGAEP38570 1179 aa11□□□□□ -0.65
RUFY3-207ENST00000504805 GGT6Q6P531 493 aa11□□□□□ -0.65
RUFY3-207ENST00000504805 RRP7BPQ9NSQ0 103 aa11□□□□□ -0.65
RUFY3-207ENST00000504805 ROCK1Q13464 1354 aa11□□□□□ -0.65
RUFY3-207ENST00000504805 SYNMO15061 1565 aa10.99□□□□□ -0.65
RUFY3-207ENST00000504805 TNRQ92752 1358 aa10.99□□□□□ -0.65
RUFY3-207ENST00000504805 MED14O60244 1454 aa10.99□□□□□ -0.65
RUFY3-207ENST00000504805 ZC3H13Q5T200 1668 aaKnown RBP10.98□□□□□ -0.65
RUFY3-207ENST00000504805 HSPA1LP34931 641 aa10.98□□□□□ -0.65
RUFY3-207ENST00000504805 UGGT1Q9NYU2 1555 aa10.98□□□□□ -0.65
RUFY3-207ENST00000504805 NLRP1Q9C000 1473 aa10.97□□□□□ -0.65
RUFY3-207ENST00000504805 MROH1Q8NDA8 1641 aa10.96□□□□□ -0.65
RUFY3-207ENST00000504805 PRDM15P57071 1507 aaPredicted RBP10.96□□□□□ -0.65
RUFY3-207ENST00000504805 ANKRD50Q9ULJ7 1429 aa10.96□□□□□ -0.65
RUFY3-207ENST00000504805 NPHP4O75161 1426 aaPredicted RBP10.95□□□□□ -0.66
RUFY3-207ENST00000504805 XIRP1Q702N8 1843 aaKnown RBP10.95□□□□□ -0.66
RUFY3-207ENST00000504805 GCC2Q8IWJ2 1684 aa10.95□□□□□ -0.66
RUFY3-207ENST00000504805 ABCC3O15438 1527 aa10.94□□□□□ -0.66
RUFY3-207ENST00000504805 FBXO31Q5XUX0 539 aaPredicted RBP10.94□□□□□ -0.66
RUFY3-207ENST00000504805 CEP152O94986 1710 aa10.94□□□□□ -0.66
RUFY3-207ENST00000504805 UBR1Q8IWV7 1749 aa10.94□□□□□ -0.66
RUFY3-207ENST00000504805 KANK1Q14678 1352 aa10.93□□□□□ -0.66
RUFY3-207ENST00000504805 WASHC2CQ9Y4E1 1318 aa10.93□□□□□ -0.66
RUFY3-207ENST00000504805 PIP4K2BP78356 416 aa10.93□□□□□ -0.66
RUFY3-207ENST00000504805 LRRC7Q96NW7 1537 aa10.93□□□□□ -0.66
RUFY3-207ENST00000504805 PLCB2Q00722 1185 aa10.92□□□□□ -0.66
RUFY3-207ENST00000504805 ERVK-7P63135 1459 aa10.92□□□□□ -0.66
RUFY3-207ENST00000504805 UNC13BO14795 1591 aa10.91□□□□□ -0.66
RUFY3-207ENST00000504805 TOM1O60784 492 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms