RNA–Protein interactions for RNA: ENST00000504677.5

POLR2J3-210, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-210ENST00000504677 ABCA6Q8N139 1617 aa17.38■□□□□ 0.37
POLR2J3-210ENST00000504677 BCORL1Q5H9F3 1711 aa17.38■□□□□ 0.37
POLR2J3-210ENST00000504677 A2MP01023 1474 aa17.37■□□□□ 0.37
POLR2J3-210ENST00000504677 DIP2CQ9Y2E4 1556 aa17.36■□□□□ 0.37
POLR2J3-210ENST00000504677 PRDM15P57071 1507 aaPredicted RBP17.35■□□□□ 0.37
POLR2J3-210ENST00000504677 RNF17Q9BXT8 1623 aaKnown RBP17.35■□□□□ 0.37
POLR2J3-210ENST00000504677 ANKRD30BQ9BXX2 1392 aa17.33■□□□□ 0.36
POLR2J3-210ENST00000504677 RAPGEF3O95398 923 aa17.32■□□□□ 0.36
POLR2J3-210ENST00000504677 VWDEQ8N2E2 1590 aa17.32■□□□□ 0.36
POLR2J3-210ENST00000504677 KANK1Q14678 1352 aa17.31■□□□□ 0.36
POLR2J3-210ENST00000504677 REREQ9P2R6 1566 aa17.31■□□□□ 0.36
POLR2J3-210ENST00000504677 TONSLQ96HA7 1378 aa17.3■□□□□ 0.36
POLR2J3-210ENST00000504677 TET3O43151 1660 aa17.3■□□□□ 0.36
POLR2J3-210ENST00000504677 PKD2Q13563 968 aa17.3■□□□□ 0.36
POLR2J3-210ENST00000504677 RPRD2Q5VT52 1461 aaKnown RBP17.3■□□□□ 0.36
POLR2J3-210ENST00000504677 MROH1Q8NDA8 1641 aa17.29■□□□□ 0.36
POLR2J3-210ENST00000504677 SIN3AQ96ST3 1273 aa17.29■□□□□ 0.36
POLR2J3-210ENST00000504677 NEUROD1Q13562 356 aa17.28■□□□□ 0.36
POLR2J3-210ENST00000504677 ARHGEF40Q8TER5 1519 aa17.26■□□□□ 0.35
POLR2J3-210ENST00000504677 LMTK2Q8IWU2 1503 aa17.26■□□□□ 0.35
POLR2J3-210ENST00000504677 YEATS2Q9ULM3 1422 aa17.25■□□□□ 0.35
POLR2J3-210ENST00000504677 KIF3BO15066 747 aa17.25■□□□□ 0.35
POLR2J3-210ENST00000504677 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.25■□□□□ 0.35
POLR2J3-210ENST00000504677 ATP10AO60312 1499 aa17.24■□□□□ 0.35
POLR2J3-210ENST00000504677 ZC3H13Q5T200 1668 aaKnown RBP17.23■□□□□ 0.35
POLR2J3-210ENST00000504677 FOXD1Q16676 465 aa17.23■□□□□ 0.35
POLR2J3-210ENST00000504677 E9PCH4 1651 aa17.23■□□□□ 0.35
POLR2J3-210ENST00000504677 AGLP35573 1532 aa17.22■□□□□ 0.35
POLR2J3-210ENST00000504677 EFCAB6Q5THR3 1501 aa17.21■□□□□ 0.35
POLR2J3-210ENST00000504677 COL17A1Q9UMD9 1497 aaPredicted RBP17.2■□□□□ 0.34
POLR2J3-210ENST00000504677 CEP152O94986 1710 aa17.19■□□□□ 0.34
POLR2J3-210ENST00000504677 SPHKAPQ2M3C7 1700 aa17.19■□□□□ 0.34
POLR2J3-210ENST00000504677 TRPM2O94759 1503 aa17.19■□□□□ 0.34
POLR2J3-210ENST00000504677 CCDC144AA2RUR9 1427 aa17.19■□□□□ 0.34
POLR2J3-210ENST00000504677 ABCC3O15438 1527 aa17.17■□□□□ 0.34
POLR2J3-210ENST00000504677 PPP1R15AO75807 674 aaPredicted RBP17.16■□□□□ 0.34
POLR2J3-210ENST00000504677 TRHP20396 242 aaPredicted RBP17.16■□□□□ 0.34
POLR2J3-210ENST00000504677 PTPRTO14522 1441 aa17.15■□□□□ 0.34
POLR2J3-210ENST00000504677 CAMSAP1Q5T5Y3 1602 aa17.15■□□□□ 0.34
POLR2J3-210ENST00000504677 PLA2R1Q13018 1463 aa17.15■□□□□ 0.34
POLR2J3-210ENST00000504677 PPP6R1Q9UPN7 881 aa17.12■□□□□ 0.33
POLR2J3-210ENST00000504677 NEURL4Q96JN8 1562 aa17.11■□□□□ 0.33
POLR2J3-210ENST00000504677 GGT6Q6P531 493 aa17.11■□□□□ 0.33
POLR2J3-210ENST00000504677 L3MBTL2Q969R5 705 aa17.1■□□□□ 0.33
POLR2J3-210ENST00000504677 ARHGAP31Q2M1Z3 1444 aa17.1■□□□□ 0.33
POLR2J3-210ENST00000504677 WASHC2CQ9Y4E1 1318 aa17.09■□□□□ 0.33
POLR2J3-210ENST00000504677 CLTCL1P53675 1640 aa17.08■□□□□ 0.32
POLR2J3-210ENST00000504677 NPATQ14207 1427 aa17.07■□□□□ 0.32
POLR2J3-210ENST00000504677 CNTLNQ9NXG0 1405 aa17.07■□□□□ 0.32
POLR2J3-210ENST00000504677 ZNF316A6NFI3 1004 aaPredicted RBP17.07■□□□□ 0.32
POLR2J3-210ENST00000504677 SIGLEC1Q9BZZ2 1709 aa17.07■□□□□ 0.32
POLR2J3-210ENST00000504677 UHRF1BP1Q6BDS2 1440 aa17.05■□□□□ 0.32
POLR2J3-210ENST00000504677 KIF1BO60333 1816 aa17.04■□□□□ 0.32
POLR2J3-210ENST00000504677 NOS1P29475 1434 aa17.03■□□□□ 0.32
POLR2J3-210ENST00000504677 SPATA31E1Q6ZUB1 1445 aa17.03■□□□□ 0.32
POLR2J3-210ENST00000504677 CLTCQ00610 1675 aaKnown RBP17.01■□□□□ 0.31
POLR2J3-210ENST00000504677 PREX1Q8TCU6 1659 aa17.01■□□□□ 0.31
POLR2J3-210ENST00000504677 PIK3C2BO00750 1634 aa17■□□□□ 0.31
POLR2J3-210ENST00000504677 STAC3Q96MF2 364 aa17■□□□□ 0.31
POLR2J3-210ENST00000504677 RALGAPBQ86X10 1494 aa16.99■□□□□ 0.31
POLR2J3-210ENST00000504677 ADGRB3O60242 1522 aa16.98■□□□□ 0.31
POLR2J3-210ENST00000504677 SYNMO15061 1565 aa16.98■□□□□ 0.31
POLR2J3-210ENST00000504677 MROH2AA6NES4 1674 aa16.97■□□□□ 0.31
POLR2J3-210ENST00000504677 UGGT1Q9NYU2 1555 aa16.96■□□□□ 0.31
POLR2J3-210ENST00000504677 PRAG1Q86YV5 1406 aa16.96■□□□□ 0.3
POLR2J3-210ENST00000504677 ERVK-7P63135 1459 aa16.95■□□□□ 0.3
POLR2J3-210ENST00000504677 SPATA31D1Q6ZQQ2 1576 aa16.94■□□□□ 0.3
POLR2J3-210ENST00000504677 IFT172Q9UG01 1749 aa16.94■□□□□ 0.3
POLR2J3-210ENST00000504677 NBPF8Q3BBV2 869 aa16.94■□□□□ 0.3
POLR2J3-210ENST00000504677 DCAF11Q8TEB1 546 aa16.94■□□□□ 0.3
POLR2J3-210ENST00000504677 ESF1Q9H501 851 aaKnown RBP16.94■□□□□ 0.3
POLR2J3-210ENST00000504677 TRPM1Q7Z4N2 1603 aa16.94■□□□□ 0.3
POLR2J3-210ENST00000504677 CFAP65Q6ZU64 1925 aaKnown RBP16.94■□□□□ 0.3
POLR2J3-210ENST00000504677 ARID4BQ4LE39 1312 aaPredicted RBP16.94■□□□□ 0.3
POLR2J3-210ENST00000504677 MYOM2P54296 1465 aa16.93■□□□□ 0.3
POLR2J3-210ENST00000504677 LAMC1P11047 1609 aa16.92■□□□□ 0.3
POLR2J3-210ENST00000504677 MADDQ8WXG6 1647 aa16.92■□□□□ 0.3
POLR2J3-210ENST00000504677 RGL3Q3MIN7 710 aa16.92■□□□□ 0.3
POLR2J3-210ENST00000504677 SLC52A1Q9NWF4 448 aa16.92■□□□□ 0.3
POLR2J3-210ENST00000504677 EIF4G2P78344 907 aaKnown RBP eCLIP16.89■□□□□ 0.29
POLR2J3-210ENST00000504677 MLECQ14165 292 aa16.89■□□□□ 0.29
POLR2J3-210ENST00000504677 ZNF326Q5BKZ1 582 aaKnown RBP16.89■□□□□ 0.29
POLR2J3-210ENST00000504677 KIAA1210Q9ULL0 1709 aa16.89■□□□□ 0.29
POLR2J3-210ENST00000504677 FER1L4A9Z1Z3 1794 aa16.89■□□□□ 0.29
POLR2J3-210ENST00000504677 PPLO60437 1756 aa16.88■□□□□ 0.29
POLR2J3-210ENST00000504677 AEBP2Q6ZN18 517 aaPredicted RBP16.88■□□□□ 0.29
POLR2J3-210ENST00000504677 KDM2AQ9Y2K7 1162 aa16.88■□□□□ 0.29
POLR2J3-210ENST00000504677 RPGRIP1LQ68CZ1 1315 aa16.88■□□□□ 0.29
POLR2J3-210ENST00000504677 GPRASP1Q5JY77 1395 aa16.87■□□□□ 0.29
POLR2J3-210ENST00000504677 ZMYM3Q14202 1370 aa16.86■□□□□ 0.29
POLR2J3-210ENST00000504677 TMEM131LA2VDJ0 1609 aa16.85■□□□□ 0.29
POLR2J3-210ENST00000504677 ROCK2O75116 1388 aaKnown RBP16.85■□□□□ 0.29
POLR2J3-210ENST00000504677 NRXN1Q9ULB1 1477 aa16.85■□□□□ 0.29
POLR2J3-210ENST00000504677 DIEXFQ68CQ4 756 aaKnown RBP16.84■□□□□ 0.29
POLR2J3-210ENST00000504677 KDM5AP29375 1690 aaKnown RBP16.84■□□□□ 0.29
POLR2J3-210ENST00000504677 USP47Q96K76 1375 aa16.83■□□□□ 0.28
POLR2J3-210ENST00000504677 POLR1AO95602 1720 aaPredicted RBP16.82■□□□□ 0.28
POLR2J3-210ENST00000504677 NEXMIFQ5QGS0 1516 aa16.82■□□□□ 0.28
POLR2J3-210ENST00000504677 HSPA5P11021 654 aaKnown RBP16.82■□□□□ 0.28
POLR2J3-210ENST00000504677 CHGAP10645 457 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 461.3 ms