RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 FAM50AQ14320 339 aaKnown RBP32.65■■■□□ 2.82
TRAPPC11-203ENST00000504526 KIF15Q9NS87 1388 aa32.64■■■□□ 2.82
TRAPPC11-203ENST00000504526 KDM5DQ9BY66 1539 aa32.62■■■□□ 2.81
TRAPPC11-203ENST00000504526 HSPA2P54652 639 aa32.62■■■□□ 2.81
TRAPPC11-203ENST00000504526 ANKRD30AQ9BXX3 1397 aa32.61■■■□□ 2.81
TRAPPC11-203ENST00000504526 WASHC2CQ9Y4E1 1318 aa32.6■■■□□ 2.81
TRAPPC11-203ENST00000504526 RNF17Q9BXT8 1623 aaKnown RBP32.6■■■□□ 2.81
TRAPPC11-203ENST00000504526 RRP7BPQ9NSQ0 103 aa32.59■■■□□ 2.81
TRAPPC11-203ENST00000504526 ERBINQ96RT1 1412 aa32.59■■■□□ 2.81
TRAPPC11-203ENST00000504526 PTPRKQ15262 1439 aa32.57■■■□□ 2.8
TRAPPC11-203ENST00000504526 CHIC2Q9UKJ5 165 aa32.55■■■□□ 2.8
TRAPPC11-203ENST00000504526 ADGRL2O95490 1459 aa32.54■■■□□ 2.8
TRAPPC11-203ENST00000504526 NCOA1Q15788 1441 aa32.53■■■□□ 2.8
TRAPPC11-203ENST00000504526 PPARGC1BQ86YN6 1023 aaKnown RBP32.53■■■□□ 2.8
TRAPPC11-203ENST00000504526 ZC3H13Q5T200 1668 aaKnown RBP32.5■■■□□ 2.79
TRAPPC11-203ENST00000504526 PZPP20742 1482 aa32.49■■■□□ 2.79
TRAPPC11-203ENST00000504526 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.48■■■□□ 2.79
TRAPPC11-203ENST00000504526 MROH1Q8NDA8 1641 aa32.47■■■□□ 2.79
TRAPPC11-203ENST00000504526 ABCC3O15438 1527 aa32.46■■■□□ 2.79
TRAPPC11-203ENST00000504526 PRDM15P57071 1507 aaPredicted RBP32.43■■■□□ 2.78
TRAPPC11-203ENST00000504526 MYO3AQ8NEV4 1616 aa32.43■■■□□ 2.78
TRAPPC11-203ENST00000504526 FBXO31Q5XUX0 539 aaPredicted RBP32.39■■■□□ 2.78
TRAPPC11-203ENST00000504526 DMRT2Q9Y5R5 561 aa32.39■■■□□ 2.78
TRAPPC11-203ENST00000504526 KANK1Q14678 1352 aa32.39■■■□□ 2.78
TRAPPC11-203ENST00000504526 TNRQ92752 1358 aa32.39■■■□□ 2.78
TRAPPC11-203ENST00000504526 DEPDC5O75140 1603 aa32.39■■■□□ 2.78
TRAPPC11-203ENST00000504526 ZNF142P52746 1687 aaPredicted RBP32.39■■■□□ 2.78
TRAPPC11-203ENST00000504526 ROCK1Q13464 1354 aa32.38■■■□□ 2.77
TRAPPC11-203ENST00000504526 CEP170BQ9Y4F5 1589 aaPredicted RBP32.36■■■□□ 2.77
TRAPPC11-203ENST00000504526 ANKRD50Q9ULJ7 1429 aa32.36■■■□□ 2.77
TRAPPC11-203ENST00000504526 ILDR1Q86SU0 546 aaPredicted RBP32.36■■■□□ 2.77
TRAPPC11-203ENST00000504526 RRBP1Q9P2E9 1410 aaKnown RBP32.34■■■□□ 2.77
TRAPPC11-203ENST00000504526 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.34■■■□□ 2.77
TRAPPC11-203ENST00000504526 A2ML1A8K2U0 1454 aa32.34■■■□□ 2.77
TRAPPC11-203ENST00000504526 CEP152O94986 1710 aa32.33■■■□□ 2.77
TRAPPC11-203ENST00000504526 CAMSAP1Q5T5Y3 1602 aa32.33■■■□□ 2.77
TRAPPC11-203ENST00000504526 STRCQ7RTU9 1775 aa32.32■■■□□ 2.76
TRAPPC11-203ENST00000504526 ARHGAP31Q2M1Z3 1444 aa32.31■■■□□ 2.76
TRAPPC11-203ENST00000504526 NLRP1Q9C000 1473 aa32.29■■■□□ 2.76
TRAPPC11-203ENST00000504526 SPATA31D1Q6ZQQ2 1576 aa32.29■■■□□ 2.76
TRAPPC11-203ENST00000504526 PLA2R1Q13018 1463 aa32.29■■■□□ 2.76
TRAPPC11-203ENST00000504526 ITGAEP38570 1179 aa32.28■■■□□ 2.76
TRAPPC11-203ENST00000504526 ERVK-7P63135 1459 aa32.28■■■□□ 2.76
TRAPPC11-203ENST00000504526 LMTK2Q8IWU2 1503 aa32.27■■■□□ 2.76
TRAPPC11-203ENST00000504526 VWDEQ8N2E2 1590 aa32.27■■■□□ 2.76
TRAPPC11-203ENST00000504526 PTPRTO14522 1441 aa32.26■■■□□ 2.76
TRAPPC11-203ENST00000504526 PKD2Q13563 968 aa32.22■■■□□ 2.75
TRAPPC11-203ENST00000504526 UGGT1Q9NYU2 1555 aa32.17■■■□□ 2.74
TRAPPC11-203ENST00000504526 THEMISQ8N1K5 641 aaPredicted RBP32.17■■■□□ 2.74
TRAPPC11-203ENST00000504526 NCKAP5LQ9HCH0 1330 aa32.15■■■□□ 2.74
TRAPPC11-203ENST00000504526 EFCAB6Q5THR3 1501 aa32.15■■■□□ 2.74
TRAPPC11-203ENST00000504526 UNC13BO14795 1591 aa32.15■■■□□ 2.74
TRAPPC11-203ENST00000504526 RPRD2Q5VT52 1461 aaKnown RBP32.1■■■□□ 2.73
TRAPPC11-203ENST00000504526 CFAP65Q6ZU64 1925 aaKnown RBP32.09■■■□□ 2.73
TRAPPC11-203ENST00000504526 TET3O43151 1660 aa32.06■■■□□ 2.72
TRAPPC11-203ENST00000504526 ANKLE2Q86XL3 938 aa32.06■■■□□ 2.72
TRAPPC11-203ENST00000504526 NOS1P29475 1434 aa32.05■■■□□ 2.72
TRAPPC11-203ENST00000504526 IQGAP3Q86VI3 1631 aa32.02■■■□□ 2.72
TRAPPC11-203ENST00000504526 CERKQ8TCT0 537 aa32.02■■■□□ 2.72
TRAPPC11-203ENST00000504526 POLR1AO95602 1720 aaPredicted RBP32.02■■■□□ 2.72
TRAPPC11-203ENST00000504526 NUP155O75694 1391 aa32.01■■■□□ 2.71
TRAPPC11-203ENST00000504526 GCC2Q8IWJ2 1684 aa32.01■■■□□ 2.71
TRAPPC11-203ENST00000504526 UBR1Q8IWV7 1749 aa32■■■□□ 2.71
TRAPPC11-203ENST00000504526 NAIPQ13075 1403 aa32■■■□□ 2.71
TRAPPC11-203ENST00000504526 FBXO41Q8TF61 875 aa31.98■■■□□ 2.71
TRAPPC11-203ENST00000504526 SLC52A1Q9NWF4 448 aa31.98■■■□□ 2.71
TRAPPC11-203ENST00000504526 SYNMO15061 1565 aa31.98■■■□□ 2.71
TRAPPC11-203ENST00000504526 NEURL4Q96JN8 1562 aa31.97■■■□□ 2.71
TRAPPC11-203ENST00000504526 HFM1A2PYH4 1435 aa31.96■■■□□ 2.71
TRAPPC11-203ENST00000504526 STAG3Q9UJ98 1225 aa31.96■■■□□ 2.71
TRAPPC11-203ENST00000504526 IDI1Q13907 227 aa31.95■■■□□ 2.71
TRAPPC11-203ENST00000504526 PIK3C2BO00750 1634 aa31.95■■■□□ 2.71
TRAPPC11-203ENST00000504526 MED14O60244 1454 aa31.95■■■□□ 2.7
TRAPPC11-203ENST00000504526 KDM5AP29375 1690 aaKnown RBP31.94■■■□□ 2.7
TRAPPC11-203ENST00000504526 SLIT1O75093 1534 aa31.92■■■□□ 2.7
TRAPPC11-203ENST00000504526 NPHP4O75161 1426 aaPredicted RBP31.92■■■□□ 2.7
TRAPPC11-203ENST00000504526 ARHGAP23Q9P227 1491 aa31.91■■■□□ 2.7
TRAPPC11-203ENST00000504526 LTBP4Q8N2S1 1624 aa31.91■■■□□ 2.7
TRAPPC11-203ENST00000504526 E9PCH4 1651 aa31.89■■■□□ 2.7
TRAPPC11-203ENST00000504526 ZNF335Q9H4Z2 1342 aaPredicted RBP31.88■■■□□ 2.69
TRAPPC11-203ENST00000504526 SCAF11Q99590 1463 aaKnown RBP31.88■■■□□ 2.69
TRAPPC11-203ENST00000504526 TMEM2Q9UHN6 1383 aa31.87■■■□□ 2.69
TRAPPC11-203ENST00000504526 EID1Q9Y6B2 187 aa31.87■■■□□ 2.69
TRAPPC11-203ENST00000504526 ADGRB3O60242 1522 aa31.85■■■□□ 2.69
TRAPPC11-203ENST00000504526 TXNDC2Q86VQ3 553 aa31.85■■■□□ 2.69
TRAPPC11-203ENST00000504526 IQSEC2Q5JU85 1478 aa31.83■■■□□ 2.69
TRAPPC11-203ENST00000504526 IQGAP1P46940 1657 aa31.83■■■□□ 2.69
TRAPPC11-203ENST00000504526 LTKP29376 864 aa31.81■■■□□ 2.68
TRAPPC11-203ENST00000504526 TRIM52Q96A61 297 aa31.76■■■□□ 2.67
TRAPPC11-203ENST00000504526 CPS1P31327 1500 aa31.73■■■□□ 2.67
TRAPPC11-203ENST00000504526 TMEM131LA2VDJ0 1609 aa31.72■■■□□ 2.67
TRAPPC11-203ENST00000504526 HDGFP51858 240 aaKnown RBP31.72■■■□□ 2.67
TRAPPC11-203ENST00000504526 ACIN1Q9UKV3 1341 aaKnown RBP31.7■■■□□ 2.66
TRAPPC11-203ENST00000504526 SPHKAPQ2M3C7 1700 aa31.69■■■□□ 2.66
TRAPPC11-203ENST00000504526 CHGAP10645 457 aaKnown RBP31.69■■■□□ 2.66
TRAPPC11-203ENST00000504526 SLC4A1APQ9BWU0 796 aaKnown RBP31.66■■■□□ 2.66
TRAPPC11-203ENST00000504526 ZFYVE9O95405 1425 aa31.66■■■□□ 2.66
TRAPPC11-203ENST00000504526 RIMS2Q9UQ26 1411 aa31.65■■■□□ 2.66
TRAPPC11-203ENST00000504526 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.64■■■□□ 2.66
TRAPPC11-203ENST00000504526 MYO5BQ9ULV0 1848 aa31.63■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms