RNA–Protein interactions for RNA: ENST00000504501.1

OTUD4-205, Transcript of OTU deubiquitinase 4, humanhuman

TSL 4

Gene OTUD4, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-205ENST00000504501 ZMYM3Q14202 1370 aa12.34□□□□□ -0.43
OTUD4-205ENST00000504501 STRCQ7RTU9 1775 aa12.34□□□□□ -0.43
OTUD4-205ENST00000504501 CAMSAP2Q08AD1 1489 aa12.34□□□□□ -0.43
OTUD4-205ENST00000504501 MAP3K1Q13233 1512 aa12.33□□□□□ -0.44
OTUD4-205ENST00000504501 DHX29Q7Z478 1369 aaKnown RBP12.32□□□□□ -0.44
OTUD4-205ENST00000504501 CNTLNQ9NXG0 1405 aa12.32□□□□□ -0.44
OTUD4-205ENST00000504501 GGT6Q6P531 493 aa12.32□□□□□ -0.44
OTUD4-205ENST00000504501 SPINK5Q9NQ38 1064 aaPredicted RBP12.31□□□□□ -0.44
OTUD4-205ENST00000504501 ZNF219Q9P2Y4 722 aaPredicted RBP12.31□□□□□ -0.44
OTUD4-205ENST00000504501 CCDC141Q6ZP82 1450 aa12.31□□□□□ -0.44
OTUD4-205ENST00000504501 UHRF1BP1Q6BDS2 1440 aa12.3□□□□□ -0.44
OTUD4-205ENST00000504501 ADGBQ8N7X0 1667 aa12.3□□□□□ -0.44
OTUD4-205ENST00000504501 MROH2AA6NES4 1674 aa12.29□□□□□ -0.44
OTUD4-205ENST00000504501 CLTCQ00610 1675 aaKnown RBP12.29□□□□□ -0.44
OTUD4-205ENST00000504501 RSPH4AQ5TD94 716 aa12.29□□□□□ -0.44
OTUD4-205ENST00000504501 FBXO41Q8TF61 875 aa12.29□□□□□ -0.44
OTUD4-205ENST00000504501 ESF1Q9H501 851 aaKnown RBP12.29□□□□□ -0.44
OTUD4-205ENST00000504501 NPATQ14207 1427 aa12.28□□□□□ -0.44
OTUD4-205ENST00000504501 PTPRKQ15262 1439 aa12.28□□□□□ -0.44
OTUD4-205ENST00000504501 ARHGEF5Q12774 1597 aa12.28□□□□□ -0.44
OTUD4-205ENST00000504501 KIF3BO15066 747 aa12.27□□□□□ -0.45
OTUD4-205ENST00000504501 MYOM3Q5VTT5 1437 aa12.27□□□□□ -0.45
OTUD4-205ENST00000504501 FBXO31Q5XUX0 539 aaPredicted RBP12.25□□□□□ -0.45
OTUD4-205ENST00000504501 CERKQ8TCT0 537 aa12.25□□□□□ -0.45
OTUD4-205ENST00000504501 MIA2Q96PC5 1412 aa12.25□□□□□ -0.45
OTUD4-205ENST00000504501 TSPY4P0CV99 314 aa12.24□□□□□ -0.45
OTUD4-205ENST00000504501 TSPY10P0CW01 314 aa12.24□□□□□ -0.45
OTUD4-205ENST00000504501 ATXN8OSP0DMR3 200 aa12.24□□□□□ -0.45
OTUD4-205ENST00000504501 NCOA1Q15788 1441 aa12.24□□□□□ -0.45
OTUD4-205ENST00000504501 MAST1Q9Y2H9 1570 aa12.22□□□□□ -0.45
OTUD4-205ENST00000504501 PTPRTO14522 1441 aa12.22□□□□□ -0.45
OTUD4-205ENST00000504501 CAMSAP1Q5T5Y3 1602 aa12.22□□□□□ -0.45
OTUD4-205ENST00000504501 ABCC5O15440 1437 aa12.21□□□□□ -0.45
OTUD4-205ENST00000504501 NCKAP5LQ9HCH0 1330 aa12.21□□□□□ -0.45
OTUD4-205ENST00000504501 MYO3AQ8NEV4 1616 aa12.2□□□□□ -0.46
OTUD4-205ENST00000504501 LTBP4Q8N2S1 1624 aa12.19□□□□□ -0.46
OTUD4-205ENST00000504501 WASHC2CQ9Y4E1 1318 aa12.19□□□□□ -0.46
OTUD4-205ENST00000504501 ZNF142P52746 1687 aaPredicted RBP12.19□□□□□ -0.46
OTUD4-205ENST00000504501 MROH1Q8NDA8 1641 aa12.19□□□□□ -0.46
OTUD4-205ENST00000504501 CEP170BQ9Y4F5 1589 aaPredicted RBP12.18□□□□□ -0.46
OTUD4-205ENST00000504501 KDM5DQ9BY66 1539 aa12.18□□□□□ -0.46
OTUD4-205ENST00000504501 PZPP20742 1482 aa12.18□□□□□ -0.46
OTUD4-205ENST00000504501 TCOF1Q13428 1488 aaKnown RBP12.17□□□□□ -0.46
OTUD4-205ENST00000504501 DNMT1P26358 1616 aaKnown RBP12.17□□□□□ -0.46
OTUD4-205ENST00000504501 RNF17Q9BXT8 1623 aaKnown RBP12.17□□□□□ -0.46
OTUD4-205ENST00000504501 PTPN23Q9H3S7 1636 aa12.17□□□□□ -0.46
OTUD4-205ENST00000504501 FGD6Q6ZV73 1430 aa12.17□□□□□ -0.46
OTUD4-205ENST00000504501 A2ML1A8K2U0 1454 aa12.16□□□□□ -0.46
OTUD4-205ENST00000504501 PLA2R1Q13018 1463 aa12.16□□□□□ -0.46
OTUD4-205ENST00000504501 RRP7BPQ9NSQ0 103 aa12.16□□□□□ -0.46
OTUD4-205ENST00000504501 TNRQ92752 1358 aa12.16□□□□□ -0.46
OTUD4-205ENST00000504501 ABCC3O15438 1527 aa12.16□□□□□ -0.46
OTUD4-205ENST00000504501 DAPK1P53355 1430 aa12.15□□□□□ -0.46
OTUD4-205ENST00000504501 FAM135AQ9P2D6 1515 aa12.15□□□□□ -0.46
OTUD4-205ENST00000504501 DUOX2Q9NRD8 1548 aa12.14□□□□□ -0.47
OTUD4-205ENST00000504501 SHANK2Q9UPX8 1470 aa12.14□□□□□ -0.47
OTUD4-205ENST00000504501 ZNF335Q9H4Z2 1342 aaPredicted RBP12.13□□□□□ -0.47
OTUD4-205ENST00000504501 CROCC2H7BZ55 1655 aa12.13□□□□□ -0.47
OTUD4-205ENST00000504501 EIF2AK4Q9P2K8 1649 aaKnown RBP12.13□□□□□ -0.47
OTUD4-205ENST00000504501 DSG3P32926 999 aa12.13□□□□□ -0.47
OTUD4-205ENST00000504501 PKD2Q13563 968 aa12.13□□□□□ -0.47
OTUD4-205ENST00000504501 CHIC2Q9UKJ5 165 aa12.13□□□□□ -0.47
OTUD4-205ENST00000504501 KIF15Q9NS87 1388 aa12.13□□□□□ -0.47
OTUD4-205ENST00000504501 CFAP65Q6ZU64 1925 aaKnown RBP12.11□□□□□ -0.47
OTUD4-205ENST00000504501 NEURL4Q96JN8 1562 aa12.11□□□□□ -0.47
OTUD4-205ENST00000504501 SPATA31D1Q6ZQQ2 1576 aa12.1□□□□□ -0.47
OTUD4-205ENST00000504501 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.1□□□□□ -0.47
OTUD4-205ENST00000504501 ATF5Q9Y2D1 282 aaPredicted RBP12.1□□□□□ -0.47
OTUD4-205ENST00000504501 CEP152O94986 1710 aa12.1□□□□□ -0.47
OTUD4-205ENST00000504501 ERVK-7P63135 1459 aa12.09□□□□□ -0.47
OTUD4-205ENST00000504501 NLRP1Q9C000 1473 aa12.09□□□□□ -0.47
OTUD4-205ENST00000504501 ERBINQ96RT1 1412 aa12.09□□□□□ -0.47
OTUD4-205ENST00000504501 PRDM15P57071 1507 aaPredicted RBP12.08□□□□□ -0.48
OTUD4-205ENST00000504501 ZC3H13Q5T200 1668 aaKnown RBP12.08□□□□□ -0.48
OTUD4-205ENST00000504501 DEPDC5O75140 1603 aa12.08□□□□□ -0.48
OTUD4-205ENST00000504501 ARHGAP31Q2M1Z3 1444 aa12.07□□□□□ -0.48
OTUD4-205ENST00000504501 THEMISQ8N1K5 641 aaPredicted RBP12.07□□□□□ -0.48
OTUD4-205ENST00000504501 UGGT1Q9NYU2 1555 aa12.07□□□□□ -0.48
OTUD4-205ENST00000504501 ADGRL2O95490 1459 aa12.07□□□□□ -0.48
OTUD4-205ENST00000504501 VWDEQ8N2E2 1590 aa12.06□□□□□ -0.48
OTUD4-205ENST00000504501 ABCB7O75027 752 aa12.06□□□□□ -0.48
OTUD4-205ENST00000504501 FAM50AQ14320 339 aaKnown RBP12.06□□□□□ -0.48
OTUD4-205ENST00000504501 ANKRD30AQ9BXX3 1397 aa12.05□□□□□ -0.48
OTUD4-205ENST00000504501 ANKLE2Q86XL3 938 aa12.05□□□□□ -0.48
OTUD4-205ENST00000504501 PPARGC1BQ86YN6 1023 aaKnown RBP12.05□□□□□ -0.48
OTUD4-205ENST00000504501 MED14O60244 1454 aa12.05□□□□□ -0.48
OTUD4-205ENST00000504501 POLR1AO95602 1720 aaPredicted RBP12.05□□□□□ -0.48
OTUD4-205ENST00000504501 IQSEC2Q5JU85 1478 aa12.04□□□□□ -0.48
OTUD4-205ENST00000504501 LTKP29376 864 aa12.04□□□□□ -0.48
OTUD4-205ENST00000504501 LMTK2Q8IWU2 1503 aa12.03□□□□□ -0.48
OTUD4-205ENST00000504501 UBR1Q8IWV7 1749 aa12.03□□□□□ -0.48
OTUD4-205ENST00000504501 NPHP4O75161 1426 aaPredicted RBP12.02□□□□□ -0.49
OTUD4-205ENST00000504501 ARHGAP23Q9P227 1491 aa12.02□□□□□ -0.49
OTUD4-205ENST00000504501 IDI1Q13907 227 aa12.01□□□□□ -0.49
OTUD4-205ENST00000504501 ANKRD50Q9ULJ7 1429 aa12.01□□□□□ -0.49
OTUD4-205ENST00000504501 NOS1P29475 1434 aa12□□□□□ -0.49
OTUD4-205ENST00000504501 STRCP1A6NGW2 1772 aa12□□□□□ -0.49
OTUD4-205ENST00000504501 SYNMO15061 1565 aa11.99□□□□□ -0.49
OTUD4-205ENST00000504501 PIK3C2BO00750 1634 aa11.99□□□□□ -0.49
OTUD4-205ENST00000504501 SLIT1O75093 1534 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms