RNA–Protein interactions for RNA: ENST00000504095.1

KDM3B-202, Transcript of lysine demethylase 3B, humanhuman

TSL 3

Gene KDM3B, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-202ENST00000504095 GOLGA2Q08379 1002 aa13.42□□□□□ -0.26
KDM3B-202ENST00000504095 POTEMA6NI47 508 aa13.41□□□□□ -0.26
KDM3B-202ENST00000504095 FAM163AQ96GL9 167 aaPredicted RBP13.41□□□□□ -0.26
KDM3B-202ENST00000504095 OCEL1Q9H607 264 aa13.41□□□□□ -0.26
KDM3B-202ENST00000504095 VPS8Q8N3P4 1428 aa13.4□□□□□ -0.26
KDM3B-202ENST00000504095 CCDC18Q5T9S5 1454 aa13.4□□□□□ -0.26
KDM3B-202ENST00000504095 MAP3K4Q9Y6R4 1608 aa13.39□□□□□ -0.27
KDM3B-202ENST00000504095 POTEGQ6S5H5 508 aa13.39□□□□□ -0.27
KDM3B-202ENST00000504095 KCNH8Q96L42 1107 aa13.39□□□□□ -0.27
KDM3B-202ENST00000504095 PPRC1Q5VV67 1664 aaKnown RBP13.38□□□□□ -0.27
KDM3B-202ENST00000504095 CFAP43Q8NDM7 1665 aa13.37□□□□□ -0.27
KDM3B-202ENST00000504095 PLEKHD1A6NEE1 506 aa13.37□□□□□ -0.27
KDM3B-202ENST00000504095 MKRN3Q13064 507 aaKnown RBP13.37□□□□□ -0.27
KDM3B-202ENST00000504095 ABCA9Q8IUA7 1624 aa13.36□□□□□ -0.27
KDM3B-202ENST00000504095 PDAP1Q13442 181 aaKnown RBP13.36□□□□□ -0.27
KDM3B-202ENST00000504095 SLAIN1Q8ND83 568 aa13.36□□□□□ -0.27
KDM3B-202ENST00000504095 MAGI3Q5TCQ9 1506 aa13.35□□□□□ -0.27
KDM3B-202ENST00000504095 KIF14Q15058 1648 aa13.34□□□□□ -0.27
KDM3B-202ENST00000504095 TROQ12816 1431 aaPredicted RBP13.33□□□□□ -0.28
KDM3B-202ENST00000504095 LCE2DQ5TA82 110 aaPredicted RBP13.33□□□□□ -0.28
KDM3B-202ENST00000504095 CDK11AQ9UQ88 783 aaPredicted RBP13.33□□□□□ -0.28
KDM3B-202ENST00000504095 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.33□□□□□ -0.28
KDM3B-202ENST00000504095 TTC37Q6PGP7 1564 aa13.32□□□□□ -0.28
KDM3B-202ENST00000504095 PLSCR2Q9NRY7 297 aa13.32□□□□□ -0.28
KDM3B-202ENST00000504095 TIAM1Q13009 1591 aa13.32□□□□□ -0.28
KDM3B-202ENST00000504095 CD109Q6YHK3 1445 aa13.31□□□□□ -0.28
KDM3B-202ENST00000504095 PDCD7Q8N8D1 485 aaKnown RBP13.3□□□□□ -0.28
KDM3B-202ENST00000504095 CABP2Q9NPB3 220 aa13.3□□□□□ -0.28
KDM3B-202ENST00000504095 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.3□□□□□ -0.283e-7■■□□□ 13.4
KDM3B-202ENST00000504095 MYO5CQ9NQX4 1742 aa13.28□□□□□ -0.28
KDM3B-202ENST00000504095 TEX14Q8IWB6 1497 aa13.27□□□□□ -0.29
KDM3B-202ENST00000504095 MAP3K1Q13233 1512 aa13.27□□□□□ -0.29
KDM3B-202ENST00000504095 EHBP1L1Q8N3D4 1523 aa13.27□□□□□ -0.29
KDM3B-202ENST00000504095 MTUS2Q5JR59 1369 aa13.26□□□□□ -0.29
KDM3B-202ENST00000504095 CDC42BPAQ5VT25 1732 aa13.25□□□□□ -0.29
KDM3B-202ENST00000504095 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.25□□□□□ -0.29
KDM3B-202ENST00000504095 CDC42BPBQ9Y5S2 1711 aa13.25□□□□□ -0.29
KDM3B-202ENST00000504095 LRRC9Q6ZRR7 1453 aa13.23□□□□□ -0.29
KDM3B-202ENST00000504095 SUPT6HQ7KZ85 1726 aaKnown RBP13.23□□□□□ -0.29
KDM3B-202ENST00000504095 KDM6BO15054 1643 aa13.23□□□□□ -0.29
KDM3B-202ENST00000504095 PREX2Q70Z35 1606 aa13.23□□□□□ -0.29
KDM3B-202ENST00000504095 PLCH2O75038 1416 aa13.22□□□□□ -0.29
KDM3B-202ENST00000504095 KANK4Q5T7N3 995 aaPredicted RBP13.22□□□□□ -0.29
KDM3B-202ENST00000504095 CFAP74Q9C0B2 1584 aa13.21□□□□□ -0.29
KDM3B-202ENST00000504095 ARAP3Q8WWN8 1544 aa13.21□□□□□ -0.29
KDM3B-202ENST00000504095 C3orf67Q6ZVT6 689 aa13.2□□□□□ -0.3
KDM3B-202ENST00000504095 FANCAO15360 1455 aa13.2□□□□□ -0.3
KDM3B-202ENST00000504095 NEO1Q92859 1461 aa13.2□□□□□ -0.3
KDM3B-202ENST00000504095 COL17A1Q9UMD9 1497 aaPredicted RBP13.2□□□□□ -0.3
KDM3B-202ENST00000504095 DPY19L2Q6NUT2 758 aa13.19□□□□□ -0.3
KDM3B-202ENST00000504095 L3MBTL3Q96JM7 780 aaPredicted RBP13.19□□□□□ -0.3
KDM3B-202ENST00000504095 ARHGAP5Q13017 1502 aa13.18□□□□□ -0.3
KDM3B-202ENST00000504095 GPATCH8Q9UKJ3 1502 aaKnown RBP13.18□□□□□ -0.3
KDM3B-202ENST00000504095 NCOA2Q15596 1464 aa13.18□□□□□ -0.3
KDM3B-202ENST00000504095 ITSN2Q9NZM3 1697 aa13.18□□□□□ -0.3
KDM3B-202ENST00000504095 AKNAQ7Z591 1439 aa13.17□□□□□ -0.3
KDM3B-202ENST00000504095 PHLDB1Q86UU1 1377 aa13.17□□□□□ -0.3
KDM3B-202ENST00000504095 CCNB3Q8WWL7 1395 aa13.17□□□□□ -0.3
KDM3B-202ENST00000504095 ST18O60284 1047 aa13.15□□□□□ -0.3
KDM3B-202ENST00000504095 EFCAB2Q5VUJ9 269 aa13.15□□□□□ -0.3
KDM3B-202ENST00000504095 RNF25Q96BH1 459 aaPredicted RBP13.15□□□□□ -0.3
KDM3B-202ENST00000504095 RICTORQ6R327 1708 aa13.15□□□□□ -0.3
KDM3B-202ENST00000504095 RIOK3O14730 519 aaKnown RBP13.14□□□□□ -0.31
KDM3B-202ENST00000504095 EFCAB3Q8N7B9 438 aa13.14□□□□□ -0.31
KDM3B-202ENST00000504095 FRMPD1Q5SYB0 1578 aa13.14□□□□□ -0.31
KDM3B-202ENST00000504095 SAMD9LQ8IVG5 1584 aa13.14□□□□□ -0.31
KDM3B-202ENST00000504095 ADGRL1O94910 1474 aa13.13□□□□□ -0.31
KDM3B-202ENST00000504095 ILDR1Q86SU0 546 aaPredicted RBP13.12□□□□□ -0.31
KDM3B-202ENST00000504095 ABCC1P33527 1531 aa13.12□□□□□ -0.31
KDM3B-202ENST00000504095 DENND4BO75064 1496 aaPredicted RBP13.11□□□□□ -0.31
KDM3B-202ENST00000504095 G3V3G9 751 aa13.11□□□□□ -0.31
KDM3B-202ENST00000504095 CFDP1Q9UEE9 299 aaPredicted RBP13.11□□□□□ -0.31
KDM3B-202ENST00000504095 SCAPERQ9BY12 1400 aa13.11□□□□□ -0.31
KDM3B-202ENST00000504095 RAPGEF3O95398 923 aa13.1□□□□□ -0.31
KDM3B-202ENST00000504095 ARHGEF12Q9NZN5 1544 aa13.09□□□□□ -0.31
KDM3B-202ENST00000504095 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.09□□□□□ -0.31
KDM3B-202ENST00000504095 ZFP91Q96JP5 570 aaPredicted RBP13.09□□□□□ -0.31
KDM3B-202ENST00000504095 ZNF777Q9ULD5 760 aaPredicted RBP13.09□□□□□ -0.31
KDM3B-202ENST00000504095 SYCP2Q9BX26 1530 aa13.08□□□□□ -0.31
KDM3B-202ENST00000504095 MYOM3Q5VTT5 1437 aa13.08□□□□□ -0.32
KDM3B-202ENST00000504095 POGZQ7Z3K3 1410 aa13.08□□□□□ -0.32
KDM3B-202ENST00000504095 SNPHO15079 494 aa13.07□□□□□ -0.32
KDM3B-202ENST00000504095 PPARGC1BQ86YN6 1023 aaKnown RBP13.07□□□□□ -0.32
KDM3B-202ENST00000504095 PCDH10Q9P2E7 1040 aa13.07□□□□□ -0.32
KDM3B-202ENST00000504095 BOLA1Q9Y3E2 137 aa13.07□□□□□ -0.32
KDM3B-202ENST00000504095 ZNF644Q9H582 1327 aaPredicted RBP13.07□□□□□ -0.32
KDM3B-202ENST00000504095 TRAPPC8Q9Y2L5 1435 aa13.06□□□□□ -0.32
KDM3B-202ENST00000504095 CAMSAP2Q08AD1 1489 aa13.06□□□□□ -0.32
KDM3B-202ENST00000504095 PLEKHH2Q8IVE3 1493 aa13.06□□□□□ -0.32
KDM3B-202ENST00000504095 VGFO15240 615 aaPredicted RBP13.06□□□□□ -0.32
KDM3B-202ENST00000504095 ZMYM4Q5VZL5 1548 aa13.06□□□□□ -0.32
KDM3B-202ENST00000504095 KDM5CP41229 1560 aa13.06□□□□□ -0.32
KDM3B-202ENST00000504095 ZNF518AQ6AHZ1 1483 aa13.05□□□□□ -0.32
KDM3B-202ENST00000504095 MIA2Q96PC5 1412 aa13.05□□□□□ -0.32
KDM3B-202ENST00000504095 KIAA1107Q9UPP5 1409 aa13.05□□□□□ -0.32
KDM3B-202ENST00000504095 PTPN23Q9H3S7 1636 aa13.04□□□□□ -0.32
KDM3B-202ENST00000504095 HNRNPMP52272 730 aaKnown RBP eCLIP13.03□□□□□ -0.32
KDM3B-202ENST00000504095 AFAP1Q8N556 730 aa13.03□□□□□ -0.32
KDM3B-202ENST00000504095 FGD6Q6ZV73 1430 aa13.03□□□□□ -0.32
KDM3B-202ENST00000504095 MBD5Q9P267 1494 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms