RNA–Protein interactions for RNA: ENST00000503784.1

RFC1-206, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-206ENST00000503784 CLTCQ00610 1675 aaKnown RBP11.55□□□□□ -0.56
RFC1-206ENST00000503784 SUPT6HQ7KZ85 1726 aaKnown RBP11.55□□□□□ -0.56
RFC1-206ENST00000503784 GGT6Q6P531 493 aa11.55□□□□□ -0.56
RFC1-206ENST00000503784 RGS17Q9UGC6 210 aaPredicted RBP11.55□□□□□ -0.56
RFC1-206ENST00000503784 ITSN2Q9NZM3 1697 aa11.55□□□□□ -0.56
RFC1-206ENST00000503784 FMN1Q68DA7 1419 aa11.54□□□□□ -0.56
RFC1-206ENST00000503784 ALKQ9UM73 1620 aa11.54□□□□□ -0.56
RFC1-206ENST00000503784 ZNF777Q9ULD5 760 aaPredicted RBP11.54□□□□□ -0.56
RFC1-206ENST00000503784 A2ML1A8K2U0 1454 aa11.54□□□□□ -0.56
RFC1-206ENST00000503784 SPAG9O60271 1321 aaKnown RBP11.53□□□□□ -0.56
RFC1-206ENST00000503784 SAMD9LQ8IVG5 1584 aa11.53□□□□□ -0.56
RFC1-206ENST00000503784 NEURL4Q96JN8 1562 aa11.53□□□□□ -0.56
RFC1-206ENST00000503784 PREX2Q70Z35 1606 aa11.53□□□□□ -0.56
RFC1-206ENST00000503784 CDC42BPBQ9Y5S2 1711 aa11.52□□□□□ -0.56
RFC1-206ENST00000503784 DNMT1P26358 1616 aaKnown RBP11.51□□□□□ -0.57
RFC1-206ENST00000503784 SYCP2Q9BX26 1530 aa11.5□□□□□ -0.57
RFC1-206ENST00000503784 A2MP01023 1474 aa11.5□□□□□ -0.57
RFC1-206ENST00000503784 VWDEQ8N2E2 1590 aa11.5□□□□□ -0.57
RFC1-206ENST00000503784 HNRNPMP52272 730 aaKnown RBP eCLIP11.49□□□□□ -0.57
RFC1-206ENST00000503784 POTEAQ6S8J7 498 aa11.49□□□□□ -0.57
RFC1-206ENST00000503784 TNRQ92752 1358 aa11.49□□□□□ -0.57
RFC1-206ENST00000503784 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.49□□□□□ -0.57
RFC1-206ENST00000503784 EEA1Q15075 1411 aa11.48□□□□□ -0.57
RFC1-206ENST00000503784 ARHGAP35Q9NRY4 1499 aa11.48□□□□□ -0.57
RFC1-206ENST00000503784 ATP7AQ04656 1500 aa11.48□□□□□ -0.57
RFC1-206ENST00000503784 PLXNC1O60486 1568 aa11.48□□□□□ -0.57
RFC1-206ENST00000503784 POLR1AO95602 1720 aaPredicted RBP11.47□□□□□ -0.57
RFC1-206ENST00000503784 NPHP4O75161 1426 aaPredicted RBP11.47□□□□□ -0.57
RFC1-206ENST00000503784 FBXO31Q5XUX0 539 aaPredicted RBP11.47□□□□□ -0.57
RFC1-206ENST00000503784 ANKLE2Q86XL3 938 aa11.47□□□□□ -0.57
RFC1-206ENST00000503784 UBTFP17480 764 aaKnown RBP11.45□□□□□ -0.58
RFC1-206ENST00000503784 RNF17Q9BXT8 1623 aaKnown RBP11.45□□□□□ -0.58
RFC1-206ENST00000503784 LRRC7Q96NW7 1537 aa11.45□□□□□ -0.58
RFC1-206ENST00000503784 AKT1S1Q96B36 256 aa11.44□□□□□ -0.58
RFC1-206ENST00000503784 INO80Q9ULG1 1556 aaPredicted RBP11.44□□□□□ -0.58
RFC1-206ENST00000503784 LRRIQ1Q96JM4 1722 aa11.43□□□□□ -0.58
RFC1-206ENST00000503784 SETD1AO15047 1707 aaKnown RBP11.42□□□□□ -0.58
RFC1-206ENST00000503784 FAM135AQ9P2D6 1515 aa11.41□□□□□ -0.58
RFC1-206ENST00000503784 CDC42BPAQ5VT25 1732 aa11.41□□□□□ -0.58
RFC1-206ENST00000503784 MYCNP04198 464 aaPredicted RBP11.41□□□□□ -0.58
RFC1-206ENST00000503784 THEMISQ8N1K5 641 aaPredicted RBP11.41□□□□□ -0.58
RFC1-206ENST00000503784 MED14O60244 1454 aa11.4□□□□□ -0.58
RFC1-206ENST00000503784 CCDC18Q5T9S5 1454 aa11.4□□□□□ -0.58
RFC1-206ENST00000503784 SYNMO15061 1565 aa11.4□□□□□ -0.58
RFC1-206ENST00000503784 UGGT1Q9NYU2 1555 aa11.4□□□□□ -0.58
RFC1-206ENST00000503784 PZPP20742 1482 aa11.39□□□□□ -0.59
RFC1-206ENST00000503784 PIP4P2Q8N4L2 257 aa11.39□□□□□ -0.59
RFC1-206ENST00000503784 CFDP1Q9UEE9 299 aaPredicted RBP11.39□□□□□ -0.59
RFC1-206ENST00000503784 IQGAP1P46940 1657 aa11.39□□□□□ -0.59
RFC1-206ENST00000503784 GPATCH8Q9UKJ3 1502 aaKnown RBP11.39□□□□□ -0.59
RFC1-206ENST00000503784 KIF3BO15066 747 aa11.38□□□□□ -0.59
RFC1-206ENST00000503784 STRCP1A6NGW2 1772 aa11.38□□□□□ -0.59
RFC1-206ENST00000503784 DEPDC5O75140 1603 aa11.38□□□□□ -0.59
RFC1-206ENST00000503784 PLEKHH2Q8IVE3 1493 aa11.38□□□□□ -0.59
RFC1-206ENST00000503784 NLRP1Q9C000 1473 aa11.38□□□□□ -0.59
RFC1-206ENST00000503784 MIA2Q96PC5 1412 aa11.37□□□□□ -0.59
RFC1-206ENST00000503784 KIAA1107Q9UPP5 1409 aa11.37□□□□□ -0.59
RFC1-206ENST00000503784 KDM5DQ9BY66 1539 aa11.37□□□□□ -0.59
RFC1-206ENST00000503784 WASHC2CQ9Y4E1 1318 aa11.36□□□□□ -0.59
RFC1-206ENST00000503784 CASKIN1Q8WXD9 1431 aa11.35□□□□□ -0.59
RFC1-206ENST00000503784 REM2Q8IYK8 340 aaPredicted RBP11.35□□□□□ -0.59
RFC1-206ENST00000503784 CCNB3Q8WWL7 1395 aa11.35□□□□□ -0.59
RFC1-206ENST00000503784 ZNF644Q9H582 1327 aaPredicted RBP11.35□□□□□ -0.59
RFC1-206ENST00000503784 ADGBQ8N7X0 1667 aa11.34□□□□□ -0.59
RFC1-206ENST00000503784 DHX29Q7Z478 1369 aaKnown RBP11.34□□□□□ -0.59
RFC1-206ENST00000503784 UPF1Q92900 1129 aaKnown RBP eCLIP11.33□□□□□ -0.6
RFC1-206ENST00000503784 TRIM52Q96A61 297 aa11.33□□□□□ -0.6
RFC1-206ENST00000503784 FAM135BQ49AJ0 1406 aa11.33□□□□□ -0.6
RFC1-206ENST00000503784 HAX1O00165 279 aa11.32□□□□□ -0.6
RFC1-206ENST00000503784 RBM33Q96EV2 1170 aaKnown RBP11.3□□□□□ -0.6
RFC1-206ENST00000503784 SCAF11Q99590 1463 aaKnown RBP11.3□□□□□ -0.6
RFC1-206ENST00000503784 FYCO1Q9BQS8 1478 aa11.3□□□□□ -0.6
RFC1-206ENST00000503784 TMEM94Q12767 1356 aa11.28□□□□□ -0.6
RFC1-206ENST00000503784 RTEL1-TNFRSF6BF6WH68 1400 aa11.28□□□□□ -0.6
RFC1-206ENST00000503784 ZC3H13Q5T200 1668 aaKnown RBP11.28□□□□□ -0.6
RFC1-206ENST00000503784 MBD5Q9P267 1494 aa11.28□□□□□ -0.6
RFC1-206ENST00000503784 ROBO1Q9Y6N7 1651 aa11.27□□□□□ -0.6
RFC1-206ENST00000503784 LTKP29376 864 aa11.27□□□□□ -0.61
RFC1-206ENST00000503784 MEX3CQ5U5Q3 659 aaKnown RBP11.27□□□□□ -0.61
RFC1-206ENST00000503784 TXNDC2Q86VQ3 553 aa11.27□□□□□ -0.61
RFC1-206ENST00000503784 MTUS2Q5JR59 1369 aa11.27□□□□□ -0.61
RFC1-206ENST00000503784 ERVK-7P63135 1459 aa11.26□□□□□ -0.61
RFC1-206ENST00000503784 FXR2P51116 673 aaKnown RBP eCLIP11.25□□□□□ -0.619e-8■■■□□ 18.9
RFC1-206ENST00000503784 ZBTB12Q9Y330 459 aaPredicted RBP11.25□□□□□ -0.61
RFC1-206ENST00000503784 JCADQ9P266 1359 aa11.25□□□□□ -0.61
RFC1-206ENST00000503784 XIRP1Q702N8 1843 aaKnown RBP11.24□□□□□ -0.61
RFC1-206ENST00000503784 PITPNM1O00562 1244 aa11.24□□□□□ -0.61
RFC1-206ENST00000503784 SRCAPQ6ZRS2 3230 aa11.24□□□□□ -0.61
RFC1-206ENST00000503784 NCOA2Q15596 1464 aa11.24□□□□□ -0.61
RFC1-206ENST00000503784 CCDC141Q6ZP82 1450 aa11.24□□□□□ -0.61
RFC1-206ENST00000503784 ABCC3O15438 1527 aa11.24□□□□□ -0.61
RFC1-206ENST00000503784 TIAM1Q13009 1591 aa11.24□□□□□ -0.61
RFC1-206ENST00000503784 LRP6O75581 1613 aa11.24□□□□□ -0.61
RFC1-206ENST00000503784 PROSER2Q86WR7 435 aaPredicted RBP11.23□□□□□ -0.61
RFC1-206ENST00000503784 ATF5Q9Y2D1 282 aaPredicted RBP11.23□□□□□ -0.61
RFC1-206ENST00000503784 EID1Q9Y6B2 187 aa11.23□□□□□ -0.61
RFC1-206ENST00000503784 LRRC9Q6ZRR7 1453 aa11.23□□□□□ -0.61
RFC1-206ENST00000503784 MAP3K1Q13233 1512 aa11.23□□□□□ -0.61
RFC1-206ENST00000503784 ZNF772Q68DY9 489 aaPredicted RBP11.22□□□□□ -0.61
RFC1-206ENST00000503784 ARHGAP23Q9P227 1491 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms