RNA–Protein interactions for RNA: ENST00000503315.5

PTCD2-206, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 1,440 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-206ENST00000503315 ABCC2Q92887 1545 aa11.54□□□□□ -0.56
PTCD2-206ENST00000503315 ARID3CA6NKF2 412 aa11.53□□□□□ -0.56
PTCD2-206ENST00000503315 PDE4DQ08499 809 aa11.53□□□□□ -0.56
PTCD2-206ENST00000503315 MKRN3Q13064 507 aaKnown RBP11.52□□□□□ -0.56
PTCD2-206ENST00000503315 CLEC11AQ9Y240 323 aa11.52□□□□□ -0.56
PTCD2-206ENST00000503315 UHRF1BP1LA0JNW5 1464 aa11.52□□□□□ -0.56
PTCD2-206ENST00000503315 UACAQ9BZF9 1416 aa11.52□□□□□ -0.57
PTCD2-206ENST00000503315 KIAA0556O60303 1618 aa11.51□□□□□ -0.57
PTCD2-206ENST00000503315 TRIM66O15016 1216 aa11.51□□□□□ -0.57
PTCD2-206ENST00000503315 PDE4AP27815 886 aa11.51□□□□□ -0.57
PTCD2-206ENST00000503315 NLRP6P59044 892 aa11.51□□□□□ -0.57
PTCD2-206ENST00000503315 ARIH1Q9Y4X5 557 aaPredicted RBP11.51□□□□□ -0.57
PTCD2-206ENST00000503315 PRXQ9BXM0 1461 aa11.5□□□□□ -0.57
PTCD2-206ENST00000503315 LARP6Q9BRS8 491 aaKnown RBP11.5□□□□□ -0.57
PTCD2-206ENST00000503315 ZNF316A6NFI3 1004 aaPredicted RBP11.49□□□□□ -0.57
PTCD2-206ENST00000503315 ASXL2Q76L83 1435 aa11.49□□□□□ -0.57
PTCD2-206ENST00000503315 KDM5BQ9UGL1 1544 aa11.48□□□□□ -0.57
PTCD2-206ENST00000503315 PLB1Q6P1J6 1458 aa11.48□□□□□ -0.57
PTCD2-206ENST00000503315 PPRC1Q5VV67 1664 aaKnown RBP11.48□□□□□ -0.57
PTCD2-206ENST00000503315 GLI2P10070 1586 aa11.47□□□□□ -0.57
PTCD2-206ENST00000503315 KDM6BO15054 1643 aa11.47□□□□□ -0.57
PTCD2-206ENST00000503315 ZCCHC11Q5TAX3 1644 aaKnown RBP11.47□□□□□ -0.57
PTCD2-206ENST00000503315 PPP1R37O75864 691 aa11.47□□□□□ -0.57
PTCD2-206ENST00000503315 RBM26Q5T8P6 1007 aaKnown RBP11.47□□□□□ -0.57
PTCD2-206ENST00000503315 DDRGK1Q96HY6 314 aa11.47□□□□□ -0.57
PTCD2-206ENST00000503315 PSEN1P49768 467 aa11.46□□□□□ -0.57
PTCD2-206ENST00000503315 DDX27Q96GQ7 796 aaKnown RBP11.44□□□□□ -0.58
PTCD2-206ENST00000503315 GOLGA3Q08378 1498 aa11.44□□□□□ -0.58
PTCD2-206ENST00000503315 MAP3K4Q9Y6R4 1608 aa11.44□□□□□ -0.58
PTCD2-206ENST00000503315 SOX12O15370 315 aa11.43□□□□□ -0.58
PTCD2-206ENST00000503315 EPRSP07814 1512 aaKnown RBP11.42□□□□□ -0.58
PTCD2-206ENST00000503315 MFSD10Q14728 455 aa11.42□□□□□ -0.58
PTCD2-206ENST00000503315 PCDHB8Q9UN66 801 aa11.42□□□□□ -0.58
PTCD2-206ENST00000503315 PCDHB13Q9Y5F0 798 aa11.42□□□□□ -0.58
PTCD2-206ENST00000503315 ABCA8O94911 1581 aa11.42□□□□□ -0.58
PTCD2-206ENST00000503315 FAM117AQ9C073 453 aa11.41□□□□□ -0.58
PTCD2-206ENST00000503315 NCKAP5LQ9HCH0 1330 aa11.41□□□□□ -0.58
PTCD2-206ENST00000503315 CCDC82Q8N4S0 544 aa11.4□□□□□ -0.58
PTCD2-206ENST00000503315 FBXO22Q8NEZ5 403 aa11.39□□□□□ -0.59
PTCD2-206ENST00000503315 TSPYL2Q9H2G4 693 aaPredicted RBP11.38□□□□□ -0.59
PTCD2-206ENST00000503315 WDR7Q9Y4E6 1490 aa11.38□□□□□ -0.59
PTCD2-206ENST00000503315 A6NJR5 290 aa11.37□□□□□ -0.59
PTCD2-206ENST00000503315 KCTD17Q8N5Z5 321 aa11.37□□□□□ -0.59
PTCD2-206ENST00000503315 ZNF579Q8NAF0 562 aaKnown RBP11.37□□□□□ -0.59
PTCD2-206ENST00000503315 COL17A1Q9UMD9 1497 aaPredicted RBP11.37□□□□□ -0.59
PTCD2-206ENST00000503315 KDM4FA0A1W2PPD8 638 aa11.36□□□□□ -0.59
PTCD2-206ENST00000503315 MLLT3P42568 568 aaPredicted RBP11.36□□□□□ -0.59
PTCD2-206ENST00000503315 EEA1Q15075 1411 aa11.36□□□□□ -0.59
PTCD2-206ENST00000503315 CAMK2BQ13554 666 aa11.35□□□□□ -0.59
PTCD2-206ENST00000503315 EFCAB3Q8N7B9 438 aa11.35□□□□□ -0.59
PTCD2-206ENST00000503315 NECTIN2Q92692 538 aa11.35□□□□□ -0.59
PTCD2-206ENST00000503315 CFAP43Q8NDM7 1665 aa11.35□□□□□ -0.59
PTCD2-206ENST00000503315 SAMD9Q5K651 1589 aa11.35□□□□□ -0.59
PTCD2-206ENST00000503315 TEX14Q8IWB6 1497 aa11.35□□□□□ -0.59
PTCD2-206ENST00000503315 TRAK2O60296 914 aa11.35□□□□□ -0.59
PTCD2-206ENST00000503315 PHF8Q9UPP1 1060 aa11.35□□□□□ -0.59
PTCD2-206ENST00000503315 KCNH8Q96L42 1107 aa11.34□□□□□ -0.59
PTCD2-206ENST00000503315 FAM9AQ8IZU1 332 aaPredicted RBP11.33□□□□□ -0.6
PTCD2-206ENST00000503315 CRISPLD2Q9H0B8 497 aa11.33□□□□□ -0.6
PTCD2-206ENST00000503315 CABP2Q9NPB3 220 aa11.33□□□□□ -0.6
PTCD2-206ENST00000503315 ATP10BO94823 1461 aa11.32□□□□□ -0.6
PTCD2-206ENST00000503315 CD109Q6YHK3 1445 aa11.32□□□□□ -0.6
PTCD2-206ENST00000503315 POTEIP0CG38 1075 aa11.32□□□□□ -0.6
PTCD2-206ENST00000503315 MAGI3Q5TCQ9 1506 aa11.31□□□□□ -0.6
PTCD2-206ENST00000503315 GOPCQ9HD26 462 aa11.31□□□□□ -0.6
PTCD2-206ENST00000503315 MINK1Q8N4C8 1332 aaPredicted RBP11.3□□□□□ -0.6
PTCD2-206ENST00000503315 RAPGEF6Q8TEU7 1601 aa11.3□□□□□ -0.6
PTCD2-206ENST00000503315 PLEKHG3A1L390 1219 aa11.3□□□□□ -0.6
PTCD2-206ENST00000503315 TRAIPQ9BWF2 469 aa11.29□□□□□ -0.6
PTCD2-206ENST00000503315 KIF21BO75037 1637 aa11.29□□□□□ -0.6
PTCD2-206ENST00000503315 CLUAP1Q96AJ1 413 aa11.27□□□□□ -0.6
PTCD2-206ENST00000503315 CCDC97Q96F63 343 aaPredicted RBP11.27□□□□□ -0.6
PTCD2-206ENST00000503315 PCMTD1Q96MG8 357 aaPredicted RBP11.27□□□□□ -0.6
PTCD2-206ENST00000503315 ABCA9Q8IUA7 1624 aa11.27□□□□□ -0.61
PTCD2-206ENST00000503315 SPDYE16A6NNV3 312 aaPredicted RBP11.26□□□□□ -0.61
PTCD2-206ENST00000503315 RAD21O60216 631 aa11.26□□□□□ -0.61
PTCD2-206ENST00000503315 SERPINA10Q9UK55 444 aa11.26□□□□□ -0.61
PTCD2-206ENST00000503315 FHOD3Q2V2M9 1422 aa11.25□□□□□ -0.61
PTCD2-206ENST00000503315 MAP2K5Q13163 448 aa11.25□□□□□ -0.61
PTCD2-206ENST00000503315 CHADLQ6NUI6 762 aa11.25□□□□□ -0.61
PTCD2-206ENST00000503315 AEBP1Q8IUX7 1158 aa11.25□□□□□ -0.61
PTCD2-206ENST00000503315 NUP153P49790 1475 aaKnown RBP11.25□□□□□ -0.61
PTCD2-206ENST00000503315 ONECUT3O60422 494 aaPredicted RBP11.24□□□□□ -0.61
PTCD2-206ENST00000503315 AMHR2Q16671 573 aa11.24□□□□□ -0.61
PTCD2-206ENST00000503315 ADGRL1O94910 1474 aa11.24□□□□□ -0.61
PTCD2-206ENST00000503315 ARAP3Q8WWN8 1544 aa11.24□□□□□ -0.61
PTCD2-206ENST00000503315 CCDC102AQ96A19 550 aa11.23□□□□□ -0.61
PTCD2-206ENST00000503315 EFCAB5A4FU69 1503 aa11.23□□□□□ -0.61
PTCD2-206ENST00000503315 PARP9Q8IXQ6 854 aa11.21□□□□□ -0.61
PTCD2-206ENST00000503315 PHLDB1Q86UU1 1377 aa11.21□□□□□ -0.62
PTCD2-206ENST00000503315 PLEKHD1A6NEE1 506 aa11.19□□□□□ -0.62
PTCD2-206ENST00000503315 POTEMA6NI47 508 aa11.19□□□□□ -0.62
PTCD2-206ENST00000503315 TTLL12Q14166 644 aaPredicted RBP11.19□□□□□ -0.62
PTCD2-206ENST00000503315 TMCO4Q5TGY1 634 aa11.19□□□□□ -0.62
PTCD2-206ENST00000503315 PROSER2Q86WR7 435 aaPredicted RBP11.19□□□□□ -0.62
PTCD2-206ENST00000503315 DCBLD2Q96PD2 775 aa11.19□□□□□ -0.62
PTCD2-206ENST00000503315 IRF6O14896 467 aa11.18□□□□□ -0.62
PTCD2-206ENST00000503315 CLCN6P51797 869 aa11.18□□□□□ -0.62
PTCD2-206ENST00000503315 PPP1R15BQ5SWA1 713 aa11.18□□□□□ -0.62
PTCD2-206ENST00000503315 NEO1Q92859 1461 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms