RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 EN1Q05925 392 aaPredicted RBP13.55□□□□□ -0.24
NIPBL-203ENST00000503274 ZNF687Q8N1G0 1237 aa13.54□□□□□ -0.24
NIPBL-203ENST00000503274 RBM33Q96EV2 1170 aaKnown RBP13.54□□□□□ -0.24
NIPBL-203ENST00000503274 MAP3K7O43318 606 aa13.53□□□□□ -0.24
NIPBL-203ENST00000503274 NUTM2FA1L443 756 aa13.51□□□□□ -0.25
NIPBL-203ENST00000503274 ADAM33Q9BZ11 813 aa13.51□□□□□ -0.25
NIPBL-203ENST00000503274 GPIHBP1Q8IV16 184 aa13.49□□□□□ -0.25
NIPBL-203ENST00000503274 BCL2L12Q9HB09 334 aa13.48□□□□□ -0.25
NIPBL-203ENST00000503274 TSR1Q2NL82 804 aaKnown RBP13.47□□□□□ -0.25
NIPBL-203ENST00000503274 C6orf132Q5T0Z8 1188 aa13.47□□□□□ -0.25
NIPBL-203ENST00000503274 TPRNQ4KMQ1 711 aa13.46□□□□□ -0.25
NIPBL-203ENST00000503274 ZC3H15Q8WU90 426 aaKnown RBP13.44□□□□□ -0.26
NIPBL-203ENST00000503274 CDHR5Q9HBB8 845 aa13.44□□□□□ -0.26
NIPBL-203ENST00000503274 PTPREP23469 700 aa13.43□□□□□ -0.26
NIPBL-203ENST00000503274 POTEEQ6S8J3 1075 aa13.43□□□□□ -0.26
NIPBL-203ENST00000503274 FCHSD2O94868 740 aa13.41□□□□□ -0.26
NIPBL-203ENST00000503274 GPR37O15354 613 aa13.4□□□□□ -0.26
NIPBL-203ENST00000503274 PTGDRQ13258 359 aa13.4□□□□□ -0.26
NIPBL-203ENST00000503274 CERKQ8TCT0 537 aa13.4□□□□□ -0.26
NIPBL-203ENST00000503274 NPDC1Q9NQX5 325 aaPredicted RBP13.4□□□□□ -0.26
NIPBL-203ENST00000503274 KCNH8Q96L42 1107 aa13.39□□□□□ -0.27
NIPBL-203ENST00000503274 KCNK17Q96T54 332 aa13.39□□□□□ -0.27
NIPBL-203ENST00000503274 AXIN2Q9Y2T1 843 aa13.39□□□□□ -0.27
NIPBL-203ENST00000503274 ARHGAP33O14559 1287 aa13.37□□□□□ -0.27
NIPBL-203ENST00000503274 PBX2P40425 430 aa13.37□□□□□ -0.27
NIPBL-203ENST00000503274 HIC1Q14526 733 aa13.37□□□□□ -0.27
NIPBL-203ENST00000503274 PPP1R3GB7ZBB8 358 aa13.36□□□□□ -0.27
NIPBL-203ENST00000503274 ZMYND10O75800 440 aa13.36□□□□□ -0.27
NIPBL-203ENST00000503274 PRKCSHP14314 528 aaPredicted RBP13.36□□□□□ -0.27
NIPBL-203ENST00000503274 COL9A1P20849 921 aa13.36□□□□□ -0.27
NIPBL-203ENST00000503274 GNPATO15228 680 aa13.35□□□□□ -0.27
NIPBL-203ENST00000503274 PSEN2P49810 448 aa13.34□□□□□ -0.27
NIPBL-203ENST00000503274 LSM11P83369 360 aaKnown RBP eCLIP13.34□□□□□ -0.27
NIPBL-203ENST00000503274 ANKRD13DQ6ZTN6 518 aa13.34□□□□□ -0.27
NIPBL-203ENST00000503274 RNF166Q96A37 237 aaPredicted RBP13.34□□□□□ -0.27
NIPBL-203ENST00000503274 BARGINQ6ZT62 677 aa13.33□□□□□ -0.28
NIPBL-203ENST00000503274 MYT1LQ9UL68 1186 aa13.31□□□□□ -0.28
NIPBL-203ENST00000503274 PRSS12P56730 875 aa13.3□□□□□ -0.28
NIPBL-203ENST00000503274 FECHP22830 423 aa13.29□□□□□ -0.28
NIPBL-203ENST00000503274 CDCA7LQ96GN5 454 aa13.29□□□□□ -0.28
NIPBL-203ENST00000503274 RBM27Q9P2N5 1060 aaKnown RBP13.29□□□□□ -0.28
NIPBL-203ENST00000503274 DMRTA1Q5VZB9 504 aa13.28□□□□□ -0.28
NIPBL-203ENST00000503274 KRI1Q8N9T8 703 aaKnown RBP13.28□□□□□ -0.28
NIPBL-203ENST00000503274 PADI6Q6TGC4 694 aa13.27□□□□□ -0.29
NIPBL-203ENST00000503274 ZBED2Q9BTP6 218 aa13.27□□□□□ -0.29
NIPBL-203ENST00000503274 MINK1Q8N4C8 1332 aaPredicted RBP13.24□□□□□ -0.29
NIPBL-203ENST00000503274 TRIM6-TRIM34B2RNG4 842 aa13.24□□□□□ -0.29
NIPBL-203ENST00000503274 MAP2K5Q13163 448 aa13.24□□□□□ -0.29
NIPBL-203ENST00000503274 PROX2Q3B8N5 592 aa13.24□□□□□ -0.29
NIPBL-203ENST00000503274 TTC13Q8NBP0 860 aa13.24□□□□□ -0.29
NIPBL-203ENST00000503274 SLC4A5Q9BY07 1137 aa13.24□□□□□ -0.29
NIPBL-203ENST00000503274 ONECUT3O60422 494 aaPredicted RBP13.23□□□□□ -0.29
NIPBL-203ENST00000503274 TSKSQ9UJT2 592 aa13.23□□□□□ -0.29
NIPBL-203ENST00000503274 SLC24A3Q9HC58 644 aa13.22□□□□□ -0.29
NIPBL-203ENST00000503274 FAM198AQ9UFP1 575 aa13.22□□□□□ -0.29
NIPBL-203ENST00000503274 IRF6O14896 467 aa13.21□□□□□ -0.29
NIPBL-203ENST00000503274 PACS2Q86VP3 889 aa13.2□□□□□ -0.3
NIPBL-203ENST00000503274 VPS9D1Q9Y2B5 631 aa13.2□□□□□ -0.3
NIPBL-203ENST00000503274 TK2O00142 265 aa13.19□□□□□ -0.3
NIPBL-203ENST00000503274 ADGRD1Q6QNK2 874 aa13.19□□□□□ -0.3
NIPBL-203ENST00000503274 KIAA1468Q9P260 1216 aa13.18□□□□□ -0.3
NIPBL-203ENST00000503274 CCDC102AQ96A19 550 aa13.17□□□□□ -0.3
NIPBL-203ENST00000503274 AK7Q96M32 723 aa13.17□□□□□ -0.3
NIPBL-203ENST00000503274 RABGEF1Q9UJ41 708 aa13.17□□□□□ -0.3
NIPBL-203ENST00000503274 ADGRG1Q9Y653 693 aa13.17□□□□□ -0.3
NIPBL-203ENST00000503274 FAM161AQ3B820 660 aa13.16□□□□□ -0.3
NIPBL-203ENST00000503274 NBPF26B4DH59 902 aa13.15□□□□□ -0.3
NIPBL-203ENST00000503274 OATP04181 439 aa13.15□□□□□ -0.3
NIPBL-203ENST00000503274 TATDN2Q93075 761 aa13.14□□□□□ -0.31
NIPBL-203ENST00000503274 NUDT18Q6ZVK8 323 aa13.13□□□□□ -0.31
NIPBL-203ENST00000503274 RBM46Q8TBY0 533 aaKnown RBP13.13□□□□□ -0.31
NIPBL-203ENST00000503274 PNMA3Q9UL41 463 aa13.13□□□□□ -0.31
NIPBL-203ENST00000503274 C3orf80F5H4A9 247 aa13.11□□□□□ -0.31
NIPBL-203ENST00000503274 HRO43593 1189 aa13.11□□□□□ -0.31
NIPBL-203ENST00000503274 METTL3Q86U44 580 aaKnown RBP13.11□□□□□ -0.31
NIPBL-203ENST00000503274 TRIM66O15016 1216 aa13.1□□□□□ -0.31
NIPBL-203ENST00000503274 PXYLP1Q8TE99 480 aa13.1□□□□□ -0.31
NIPBL-203ENST00000503274 EYA1Q99502 592 aa13.1□□□□□ -0.31
NIPBL-203ENST00000503274 NBPF3Q9H094 633 aa13.1□□□□□ -0.31
NIPBL-203ENST00000503274 BHMG1C9JSJ3 638 aaPredicted RBP13.09□□□□□ -0.31
NIPBL-203ENST00000503274 SMAPO00193 183 aa13.09□□□□□ -0.31
NIPBL-203ENST00000503274 SEPT9Q9UHD8 586 aaPredicted RBP13.07□□□□□ -0.32
NIPBL-203ENST00000503274 PHOX2BQ99453 314 aa13.06□□□□□ -0.32
NIPBL-203ENST00000503274 LAPTM4BQ86VI4 370 aa13.05□□□□□ -0.32
NIPBL-203ENST00000503274 MRPL50Q8N5N7 158 aaKnown RBP13.05□□□□□ -0.32
NIPBL-203ENST00000503274 STAC3Q96MF2 364 aa13.05□□□□□ -0.32
NIPBL-203ENST00000503274 FAM98CQ17RN3 349 aaKnown RBP13.04□□□□□ -0.32
NIPBL-203ENST00000503274 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.03□□□□□ -0.32
NIPBL-203ENST00000503274 RCCD1A6NED2 376 aa13.03□□□□□ -0.32
NIPBL-203ENST00000503274 AMHR2Q16671 573 aa13.03□□□□□ -0.32
NIPBL-203ENST00000503274 PDE4DQ08499 809 aa13.02□□□□□ -0.33
NIPBL-203ENST00000503274 DNAJB2P25686 324 aa13.01□□□□□ -0.33
NIPBL-203ENST00000503274 NLRP7Q8WX94 980 aa12.99□□□□□ -0.33
NIPBL-203ENST00000503274 MDM2Q00987 491 aaPredicted RBP12.98□□□□□ -0.33
NIPBL-203ENST00000503274 GOLGA8CPA6NN73 597 aa12.97□□□□□ -0.33
NIPBL-203ENST00000503274 TTLL12Q14166 644 aaPredicted RBP12.97□□□□□ -0.33
NIPBL-203ENST00000503274 ZFRQ96KR1 1074 aaKnown RBP12.97□□□□□ -0.33
NIPBL-203ENST00000503274 TMEM134Q9H6X4 195 aa12.97□□□□□ -0.33
NIPBL-203ENST00000503274 CLCN1P35523 988 aa12.96□□□□□ -0.33
NIPBL-203ENST00000503274 HDGFP51858 240 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms