RNA–Protein interactions for RNA: ENST00000502996.5

SEMA6A-203, Transcript of semaphorin 6A, humanhuman

TSL 3

Gene SEMA6A, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-203ENST00000502996 MBD5Q9P267 1494 aa13.11□□□□□ -0.31
SEMA6A-203ENST00000502996 SIGLEC1Q9BZZ2 1709 aa13.11□□□□□ -0.31
SEMA6A-203ENST00000502996 DNMT1P26358 1616 aaKnown RBP13.11□□□□□ -0.31
SEMA6A-203ENST00000502996 PPARGC1BQ86YN6 1023 aaKnown RBP13.11□□□□□ -0.31
SEMA6A-203ENST00000502996 TCOF1Q13428 1488 aaKnown RBP13.1□□□□□ -0.31
SEMA6A-203ENST00000502996 SSUH2Q9Y2M2 353 aa13.1□□□□□ -0.31
SEMA6A-203ENST00000502996 BCORL1Q5H9F3 1711 aa13.1□□□□□ -0.31
SEMA6A-203ENST00000502996 SPAG9O60271 1321 aaKnown RBP13.1□□□□□ -0.31
SEMA6A-203ENST00000502996 C9orf84Q5VXU9 1444 aa13.09□□□□□ -0.31
SEMA6A-203ENST00000502996 REREQ9P2R6 1566 aa13.09□□□□□ -0.31
SEMA6A-203ENST00000502996 MAST1Q9Y2H9 1570 aa13.09□□□□□ -0.31
SEMA6A-203ENST00000502996 ATP10AO60312 1499 aa13.09□□□□□ -0.31
SEMA6A-203ENST00000502996 PROM2Q8N271 834 aa13.08□□□□□ -0.32
SEMA6A-203ENST00000502996 FER1L4A9Z1Z3 1794 aa13.07□□□□□ -0.32
SEMA6A-203ENST00000502996 RSPH4AQ5TD94 716 aa13.06□□□□□ -0.32
SEMA6A-203ENST00000502996 PLXNC1O60486 1568 aa13.06□□□□□ -0.32
SEMA6A-203ENST00000502996 SHANK2Q9UPX8 1470 aa13.05□□□□□ -0.32
SEMA6A-203ENST00000502996 ARID4BQ4LE39 1312 aaPredicted RBP13.05□□□□□ -0.32
SEMA6A-203ENST00000502996 ADAMTSL3P82987 1691 aa13.05□□□□□ -0.32
SEMA6A-203ENST00000502996 RTEL1-TNFRSF6BF6WH68 1400 aa13.05□□□□□ -0.32
SEMA6A-203ENST00000502996 FAM50AQ14320 339 aaKnown RBP13.04□□□□□ -0.32
SEMA6A-203ENST00000502996 DAPK1P53355 1430 aa13.04□□□□□ -0.32
SEMA6A-203ENST00000502996 MADDQ8WXG6 1647 aa13.03□□□□□ -0.32
SEMA6A-203ENST00000502996 RIMS1Q86UR5 1692 aaKnown RBP13.03□□□□□ -0.32
SEMA6A-203ENST00000502996 TSPY4P0CV99 314 aa13.03□□□□□ -0.32
SEMA6A-203ENST00000502996 TSPY10P0CW01 314 aa13.03□□□□□ -0.32
SEMA6A-203ENST00000502996 A2MP01023 1474 aa13.02□□□□□ -0.33
SEMA6A-203ENST00000502996 AGLP35573 1532 aa13.02□□□□□ -0.33
SEMA6A-203ENST00000502996 ABCC5O15440 1437 aa13.01□□□□□ -0.33
SEMA6A-203ENST00000502996 EIF2AK4Q9P2K8 1649 aaKnown RBP12.99□□□□□ -0.33
SEMA6A-203ENST00000502996 FBXO3Q9UK99 471 aa12.99□□□□□ -0.33
SEMA6A-203ENST00000502996 RRBP1Q9P2E9 1410 aaKnown RBP12.98□□□□□ -0.33
SEMA6A-203ENST00000502996 AKT1S1Q96B36 256 aa12.97□□□□□ -0.33
SEMA6A-203ENST00000502996 DUOX2Q9NRD8 1548 aa12.97□□□□□ -0.33
SEMA6A-203ENST00000502996 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.96□□□□□ -0.33
SEMA6A-203ENST00000502996 KDM4FA0A1W2PPD8 638 aa12.96□□□□□ -0.33
SEMA6A-203ENST00000502996 MLECQ14165 292 aa12.96□□□□□ -0.33
SEMA6A-203ENST00000502996 ADGRL2O95490 1459 aa12.96□□□□□ -0.34
SEMA6A-203ENST00000502996 CLTCQ00610 1675 aaKnown RBP12.96□□□□□ -0.34
SEMA6A-203ENST00000502996 RNF17Q9BXT8 1623 aaKnown RBP12.95□□□□□ -0.34
SEMA6A-203ENST00000502996 ANKRD30AQ9BXX3 1397 aa12.95□□□□□ -0.34
SEMA6A-203ENST00000502996 MROH2AA6NES4 1674 aa12.95□□□□□ -0.34
SEMA6A-203ENST00000502996 DHX29Q7Z478 1369 aaKnown RBP12.94□□□□□ -0.34
SEMA6A-203ENST00000502996 KIF15Q9NS87 1388 aa12.94□□□□□ -0.34
SEMA6A-203ENST00000502996 CHIC2Q9UKJ5 165 aa12.94□□□□□ -0.34
SEMA6A-203ENST00000502996 CEP152O94986 1710 aa12.93□□□□□ -0.34
SEMA6A-203ENST00000502996 C3P01024 1663 aa12.93□□□□□ -0.34
SEMA6A-203ENST00000502996 GCC2Q8IWJ2 1684 aa12.93□□□□□ -0.34
SEMA6A-203ENST00000502996 ITGAEP38570 1179 aa12.92□□□□□ -0.34
SEMA6A-203ENST00000502996 ZC3H13Q5T200 1668 aaKnown RBP12.92□□□□□ -0.34
SEMA6A-203ENST00000502996 CFAP65Q6ZU64 1925 aaKnown RBP12.92□□□□□ -0.34
SEMA6A-203ENST00000502996 NCOA1Q15788 1441 aa12.91□□□□□ -0.34
SEMA6A-203ENST00000502996 ERBINQ96RT1 1412 aa12.91□□□□□ -0.34
SEMA6A-203ENST00000502996 DEPDC5O75140 1603 aa12.91□□□□□ -0.34
SEMA6A-203ENST00000502996 PTPRMP28827 1452 aa12.91□□□□□ -0.34
SEMA6A-203ENST00000502996 SETD1BQ9UPS6 1966 aaKnown RBP12.9□□□□□ -0.34
SEMA6A-203ENST00000502996 PTPRKQ15262 1439 aa12.9□□□□□ -0.34
SEMA6A-203ENST00000502996 FAM135AQ9P2D6 1515 aa12.9□□□□□ -0.34
SEMA6A-203ENST00000502996 ESF1Q9H501 851 aaKnown RBP12.9□□□□□ -0.34
SEMA6A-203ENST00000502996 RRP7BPQ9NSQ0 103 aa12.9□□□□□ -0.34
SEMA6A-203ENST00000502996 CNTLNQ9NXG0 1405 aa12.89□□□□□ -0.35
SEMA6A-203ENST00000502996 MROH1Q8NDA8 1641 aa12.89□□□□□ -0.35
SEMA6A-203ENST00000502996 KIF3BO15066 747 aa12.89□□□□□ -0.35
SEMA6A-203ENST00000502996 ROCK1Q13464 1354 aa12.89□□□□□ -0.35
SEMA6A-203ENST00000502996 KDM5DQ9BY66 1539 aa12.88□□□□□ -0.35
SEMA6A-203ENST00000502996 GGT6Q6P531 493 aa12.88□□□□□ -0.35
SEMA6A-203ENST00000502996 PRDM15P57071 1507 aaPredicted RBP12.88□□□□□ -0.35
SEMA6A-203ENST00000502996 STAG3Q9UJ98 1225 aa12.87□□□□□ -0.35
SEMA6A-203ENST00000502996 CAMSAP1Q5T5Y3 1602 aa12.86□□□□□ -0.35
SEMA6A-203ENST00000502996 ANKRD50Q9ULJ7 1429 aa12.86□□□□□ -0.35
SEMA6A-203ENST00000502996 PREX1Q8TCU6 1659 aa12.86□□□□□ -0.35
SEMA6A-203ENST00000502996 UNC13BO14795 1591 aa12.86□□□□□ -0.35
SEMA6A-203ENST00000502996 ABCC3O15438 1527 aa12.83□□□□□ -0.35
SEMA6A-203ENST00000502996 KANK1Q14678 1352 aa12.82□□□□□ -0.36
SEMA6A-203ENST00000502996 SPDYE1Q8NFV5 336 aaPredicted RBP12.81□□□□□ -0.36
SEMA6A-203ENST00000502996 VWDEQ8N2E2 1590 aa12.81□□□□□ -0.36
SEMA6A-203ENST00000502996 TET3O43151 1660 aa12.8□□□□□ -0.36
SEMA6A-203ENST00000502996 REM2Q8IYK8 340 aaPredicted RBP12.8□□□□□ -0.36
SEMA6A-203ENST00000502996 WASHC2CQ9Y4E1 1318 aa12.8□□□□□ -0.36
SEMA6A-203ENST00000502996 IQGAP3Q86VI3 1631 aa12.8□□□□□ -0.36
SEMA6A-203ENST00000502996 HFM1A2PYH4 1435 aa12.79□□□□□ -0.36
SEMA6A-203ENST00000502996 MYO3AQ8NEV4 1616 aa12.79□□□□□ -0.36
SEMA6A-203ENST00000502996 ZMYM3Q14202 1370 aa12.79□□□□□ -0.36
SEMA6A-203ENST00000502996 NAIPQ13075 1403 aa12.79□□□□□ -0.36
SEMA6A-203ENST00000502996 PZPP20742 1482 aa12.78□□□□□ -0.36
SEMA6A-203ENST00000502996 ZNF142P52746 1687 aaPredicted RBP12.78□□□□□ -0.36
SEMA6A-203ENST00000502996 CEBPAP49715 358 aaPredicted RBP12.78□□□□□ -0.36
SEMA6A-203ENST00000502996 NPATQ14207 1427 aa12.77□□□□□ -0.37
SEMA6A-203ENST00000502996 EFCAB6Q5THR3 1501 aa12.77□□□□□ -0.37
SEMA6A-203ENST00000502996 LMTK2Q8IWU2 1503 aa12.77□□□□□ -0.37
SEMA6A-203ENST00000502996 E9PCH4 1651 aa12.75□□□□□ -0.37
SEMA6A-203ENST00000502996 UHRF1BP1Q6BDS2 1440 aa12.74□□□□□ -0.37
SEMA6A-203ENST00000502996 VASPP50552 380 aaPredicted RBP12.74□□□□□ -0.37
SEMA6A-203ENST00000502996 SPATA31D1Q6ZQQ2 1576 aa12.73□□□□□ -0.37
SEMA6A-203ENST00000502996 LMTK3Q96Q04 1460 aa12.73□□□□□ -0.37
SEMA6A-203ENST00000502996 CEP170BQ9Y4F5 1589 aaPredicted RBP12.73□□□□□ -0.37
SEMA6A-203ENST00000502996 ERVK-7P63135 1459 aa12.72□□□□□ -0.37
SEMA6A-203ENST00000502996 ARHGAP31Q2M1Z3 1444 aa12.72□□□□□ -0.37
SEMA6A-203ENST00000502996 SPHKAPQ2M3C7 1700 aa12.72□□□□□ -0.37
SEMA6A-203ENST00000502996 NUP155O75694 1391 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms