RNA–Protein interactions for RNA: ENST00000502416.5

SLC38A9-205, Transcript of solute carrier family 38 member 9, humanhuman

TSL 4

Gene SLC38A9, Length 562 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9-205ENST00000502416 CEP170BQ9Y4F5 1589 aaPredicted RBP12□□□□□ -0.49
SLC38A9-205ENST00000502416 KIDINS220Q9ULH0 1771 aa11.98□□□□□ -0.49
SLC38A9-205ENST00000502416 ATP1B4Q9UN42 357 aaPredicted RBP11.98□□□□□ -0.49
SLC38A9-205ENST00000502416 ITSN2Q9NZM3 1697 aa11.97□□□□□ -0.49
SLC38A9-205ENST00000502416 ABCC1P33527 1531 aa11.97□□□□□ -0.49
SLC38A9-205ENST00000502416 ZMYM3Q14202 1370 aa11.97□□□□□ -0.49
SLC38A9-205ENST00000502416 PKD2Q13563 968 aa11.97□□□□□ -0.49
SLC38A9-205ENST00000502416 CDC42BPBQ9Y5S2 1711 aa11.97□□□□□ -0.49
SLC38A9-205ENST00000502416 CLTCQ00610 1675 aaKnown RBP11.97□□□□□ -0.49
SLC38A9-205ENST00000502416 SPDYE2BA6NHP3 402 aa11.96□□□□□ -0.49
SLC38A9-205ENST00000502416 SPDYE6P0CI01 402 aa11.96□□□□□ -0.49
SLC38A9-205ENST00000502416 SPDYE2Q495Y8 402 aa11.96□□□□□ -0.49
SLC38A9-205ENST00000502416 TOM1O60784 492 aa11.95□□□□□ -0.5
SLC38A9-205ENST00000502416 ALKQ9UM73 1620 aa11.95□□□□□ -0.5
SLC38A9-205ENST00000502416 SSUH2Q9Y2M2 353 aa11.94□□□□□ -0.5
SLC38A9-205ENST00000502416 TROQ12816 1431 aaPredicted RBP11.94□□□□□ -0.5
SLC38A9-205ENST00000502416 PREX2Q70Z35 1606 aa11.93□□□□□ -0.5
SLC38A9-205ENST00000502416 CPS1P31327 1500 aa11.93□□□□□ -0.5
SLC38A9-205ENST00000502416 IFNLR1Q8IU57 520 aaPredicted RBP11.93□□□□□ -0.5
SLC38A9-205ENST00000502416 PTPRKQ15262 1439 aa11.93□□□□□ -0.5
SLC38A9-205ENST00000502416 NEURL4Q96JN8 1562 aa11.92□□□□□ -0.5
SLC38A9-205ENST00000502416 POLR1AO95602 1720 aaPredicted RBP11.91□□□□□ -0.5
SLC38A9-205ENST00000502416 SHANK2Q9UPX8 1470 aa11.91□□□□□ -0.5
SLC38A9-205ENST00000502416 CLIP1P30622 1438 aa11.91□□□□□ -0.5
SLC38A9-205ENST00000502416 LRRIQ1Q96JM4 1722 aa11.91□□□□□ -0.5
SLC38A9-205ENST00000502416 DNMT1P26358 1616 aaKnown RBP11.9□□□□□ -0.5
SLC38A9-205ENST00000502416 SAMD9LQ8IVG5 1584 aa11.9□□□□□ -0.5
SLC38A9-205ENST00000502416 RGS17Q9UGC6 210 aaPredicted RBP11.9□□□□□ -0.5
SLC38A9-205ENST00000502416 CDK11AQ9UQ88 783 aaPredicted RBP11.9□□□□□ -0.5
SLC38A9-205ENST00000502416 A2ML1A8K2U0 1454 aa11.89□□□□□ -0.51
SLC38A9-205ENST00000502416 VWDEQ8N2E2 1590 aa11.88□□□□□ -0.51
SLC38A9-205ENST00000502416 FMN1Q68DA7 1419 aa11.87□□□□□ -0.51
SLC38A9-205ENST00000502416 PLXNC1O60486 1568 aa11.87□□□□□ -0.51
SLC38A9-205ENST00000502416 CDC42BPAQ5VT25 1732 aa11.86□□□□□ -0.51
SLC38A9-205ENST00000502416 SYCP2Q9BX26 1530 aa11.86□□□□□ -0.51
SLC38A9-205ENST00000502416 ATP7AQ04656 1500 aa11.85□□□□□ -0.51
SLC38A9-205ENST00000502416 GGT6Q6P531 493 aa11.84□□□□□ -0.51
SLC38A9-205ENST00000502416 SPAG9O60271 1321 aaKnown RBP11.84□□□□□ -0.51
SLC38A9-205ENST00000502416 A2MP01023 1474 aa11.83□□□□□ -0.52
SLC38A9-205ENST00000502416 ARHGAP35Q9NRY4 1499 aa11.83□□□□□ -0.52
SLC38A9-205ENST00000502416 SETD1AO15047 1707 aaKnown RBP11.83□□□□□ -0.52
SLC38A9-205ENST00000502416 ZNF777Q9ULD5 760 aaPredicted RBP11.83□□□□□ -0.52
SLC38A9-205ENST00000502416 INO80Q9ULG1 1556 aaPredicted RBP11.83□□□□□ -0.52
SLC38A9-205ENST00000502416 RNF17Q9BXT8 1623 aaKnown RBP11.82□□□□□ -0.52
SLC38A9-205ENST00000502416 STRCP1A6NGW2 1772 aa11.82□□□□□ -0.52
SLC38A9-205ENST00000502416 EEA1Q15075 1411 aa11.81□□□□□ -0.52
SLC38A9-205ENST00000502416 POTEAQ6S8J7 498 aa11.81□□□□□ -0.52
SLC38A9-205ENST00000502416 LRRC7Q96NW7 1537 aa11.81□□□□□ -0.52
SLC38A9-205ENST00000502416 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.8□□□□□ -0.52
SLC38A9-205ENST00000502416 NPHP4O75161 1426 aaPredicted RBP11.8□□□□□ -0.52
SLC38A9-205ENST00000502416 SLC24A1O60721 1099 aa11.8□□□□□ -0.52
SLC38A9-205ENST00000502416 HNRNPMP52272 730 aaKnown RBP eCLIP11.8□□□□□ -0.52
SLC38A9-205ENST00000502416 TNRQ92752 1358 aa11.79□□□□□ -0.52
SLC38A9-205ENST00000502416 FBXO31Q5XUX0 539 aaPredicted RBP11.79□□□□□ -0.52
SLC38A9-205ENST00000502416 SYNMO15061 1565 aa11.78□□□□□ -0.52
SLC38A9-205ENST00000502416 IQGAP1P46940 1657 aa11.78□□□□□ -0.52
SLC38A9-205ENST00000502416 ANKLE2Q86XL3 938 aa11.77□□□□□ -0.53
SLC38A9-205ENST00000502416 MED14O60244 1454 aa11.76□□□□□ -0.53
SLC38A9-205ENST00000502416 DEPDC5O75140 1603 aa11.76□□□□□ -0.53
SLC38A9-205ENST00000502416 ADGBQ8N7X0 1667 aa11.76□□□□□ -0.53
SLC38A9-205ENST00000502416 STAG3Q9UJ98 1225 aa11.75□□□□□ -0.53
SLC38A9-205ENST00000502416 CCDC18Q5T9S5 1454 aa11.75□□□□□ -0.53
SLC38A9-205ENST00000502416 GPATCH8Q9UKJ3 1502 aaKnown RBP11.75□□□□□ -0.53
SLC38A9-205ENST00000502416 KLHL34Q8N239 644 aa11.74□□□□□ -0.53
SLC38A9-205ENST00000502416 PZPP20742 1482 aa11.74□□□□□ -0.53
SLC38A9-205ENST00000502416 UGGT1Q9NYU2 1555 aa11.74□□□□□ -0.53
SLC38A9-205ENST00000502416 UBTFP17480 764 aaKnown RBP11.73□□□□□ -0.53
SLC38A9-205ENST00000502416 FAM135AQ9P2D6 1515 aa11.73□□□□□ -0.53
SLC38A9-205ENST00000502416 KDM5DQ9BY66 1539 aa11.72□□□□□ -0.53
SLC38A9-205ENST00000502416 PLCD3Q8N3E9 789 aa11.72□□□□□ -0.53
SLC38A9-205ENST00000502416 KIAA1107Q9UPP5 1409 aa11.71□□□□□ -0.53
SLC38A9-205ENST00000502416 THEMISQ8N1K5 641 aaPredicted RBP11.71□□□□□ -0.53
SLC38A9-205ENST00000502416 ZC3H13Q5T200 1668 aaKnown RBP11.71□□□□□ -0.54
SLC38A9-205ENST00000502416 PLEKHH2Q8IVE3 1493 aa11.7□□□□□ -0.54
SLC38A9-205ENST00000502416 NLRP1Q9C000 1473 aa11.7□□□□□ -0.54
SLC38A9-205ENST00000502416 CASKIN1Q8WXD9 1431 aa11.7□□□□□ -0.54
SLC38A9-205ENST00000502416 XIRP1Q702N8 1843 aaKnown RBP11.7□□□□□ -0.54
SLC38A9-205ENST00000502416 MIA2Q96PC5 1412 aa11.69□□□□□ -0.54
SLC38A9-205ENST00000502416 MIER1Q8N108 512 aa11.69□□□□□ -0.54
SLC38A9-205ENST00000502416 CFDP1Q9UEE9 299 aaPredicted RBP11.68□□□□□ -0.54
SLC38A9-205ENST00000502416 KIF3BO15066 747 aa11.67□□□□□ -0.54
SLC38A9-205ENST00000502416 DHX29Q7Z478 1369 aaKnown RBP11.67□□□□□ -0.54
SLC38A9-205ENST00000502416 ZNF644Q9H582 1327 aaPredicted RBP11.66□□□□□ -0.54
SLC38A9-205ENST00000502416 ROBO1Q9Y6N7 1651 aa11.66□□□□□ -0.54
SLC38A9-205ENST00000502416 SPOCK2Q92563 424 aa11.66□□□□□ -0.54
SLC38A9-205ENST00000502416 WASHC2CQ9Y4E1 1318 aa11.65□□□□□ -0.54
SLC38A9-205ENST00000502416 UPF1Q92900 1129 aaKnown RBP eCLIP11.65□□□□□ -0.54
SLC38A9-205ENST00000502416 FAM135BQ49AJ0 1406 aa11.65□□□□□ -0.54
SLC38A9-205ENST00000502416 CCNB3Q8WWL7 1395 aa11.65□□□□□ -0.55
SLC38A9-205ENST00000502416 SRCAPQ6ZRS2 3230 aa11.64□□□□□ -0.55
SLC38A9-205ENST00000502416 FYCO1Q9BQS8 1478 aa11.63□□□□□ -0.55
SLC38A9-205ENST00000502416 MBD5Q9P267 1494 aa11.63□□□□□ -0.55
SLC38A9-205ENST00000502416 SCAF11Q99590 1463 aaKnown RBP11.63□□□□□ -0.55
SLC38A9-205ENST00000502416 RTEL1-TNFRSF6BF6WH68 1400 aa11.62□□□□□ -0.55
SLC38A9-205ENST00000502416 TRIM52Q96A61 297 aa11.62□□□□□ -0.55
SLC38A9-205ENST00000502416 UBR1Q8IWV7 1749 aa11.62□□□□□ -0.55
SLC38A9-205ENST00000502416 TIAM1Q13009 1591 aa11.62□□□□□ -0.55
SLC38A9-205ENST00000502416 ERVK-7P63135 1459 aa11.6□□□□□ -0.55
SLC38A9-205ENST00000502416 TMEM94Q12767 1356 aa11.6□□□□□ -0.55
SLC38A9-205ENST00000502416 PHLPP1O60346 1717 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms