RNA–Protein interactions for RNA: ENST00000502379.5

SDHA-202, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 679 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-202ENST00000502379 CAMSAP1Q5T5Y3 1602 aa34.69■■■■□ 3.14
SDHA-202ENST00000502379 MYO3AQ8NEV4 1616 aa34.67■■■■□ 3.14
SDHA-202ENST00000502379 KDM5DQ9BY66 1539 aa34.66■■■■□ 3.14
SDHA-202ENST00000502379 NCKAP5LQ9HCH0 1330 aa34.64■■■■□ 3.14
SDHA-202ENST00000502379 CEP170BQ9Y4F5 1589 aaPredicted RBP34.62■■■■□ 3.13
SDHA-202ENST00000502379 ABCC5O15440 1437 aa34.62■■■■□ 3.13
SDHA-202ENST00000502379 FAM135AQ9P2D6 1515 aa34.61■■■■□ 3.13
SDHA-202ENST00000502379 ZNF142P52746 1687 aaPredicted RBP34.61■■■■□ 3.13
SDHA-202ENST00000502379 PTPN23Q9H3S7 1636 aa34.61■■■■□ 3.13
SDHA-202ENST00000502379 PZPP20742 1482 aa34.6■■■■□ 3.13
SDHA-202ENST00000502379 FGD6Q6ZV73 1430 aa34.58■■■■□ 3.13
SDHA-202ENST00000502379 TNRQ92752 1358 aa34.58■■■■□ 3.13
SDHA-202ENST00000502379 A2ML1A8K2U0 1454 aa34.56■■■■□ 3.12
SDHA-202ENST00000502379 RNF17Q9BXT8 1623 aaKnown RBP34.55■■■■□ 3.12
SDHA-202ENST00000502379 PLA2R1Q13018 1463 aa34.54■■■■□ 3.12
SDHA-202ENST00000502379 PKD2Q13563 968 aa34.54■■■■□ 3.12
SDHA-202ENST00000502379 RRP7BPQ9NSQ0 103 aa34.54■■■■□ 3.12
SDHA-202ENST00000502379 TCOF1Q13428 1488 aaKnown RBP34.53■■■■□ 3.12
SDHA-202ENST00000502379 SHANK2Q9UPX8 1470 aa34.52■■■■□ 3.12
SDHA-202ENST00000502379 DUOX2Q9NRD8 1548 aa34.52■■■■□ 3.12
SDHA-202ENST00000502379 DAPK1P53355 1430 aa34.52■■■■□ 3.12
SDHA-202ENST00000502379 EIF2AK4Q9P2K8 1649 aaKnown RBP34.52■■■■□ 3.12
SDHA-202ENST00000502379 KIF15Q9NS87 1388 aa34.51■■■■□ 3.12
SDHA-202ENST00000502379 ABCC3O15438 1527 aa34.5■■■■□ 3.11
SDHA-202ENST00000502379 DNMT1P26358 1616 aaKnown RBP34.5■■■■□ 3.11
SDHA-202ENST00000502379 MROH1Q8NDA8 1641 aa34.48■■■■□ 3.11
SDHA-202ENST00000502379 CROCC2H7BZ55 1655 aa34.47■■■■□ 3.11
SDHA-202ENST00000502379 LTBP4Q8N2S1 1624 aa34.47■■■■□ 3.11
SDHA-202ENST00000502379 CHIC2Q9UKJ5 165 aa34.46■■■■□ 3.11
SDHA-202ENST00000502379 ZC3H13Q5T200 1668 aaKnown RBP34.41■■■■□ 3.1
SDHA-202ENST00000502379 ERBINQ96RT1 1412 aa34.4■■■■□ 3.1
SDHA-202ENST00000502379 ZNF335Q9H4Z2 1342 aaPredicted RBP34.4■■■■□ 3.1
SDHA-202ENST00000502379 NLRP1Q9C000 1473 aa34.39■■■■□ 3.1
SDHA-202ENST00000502379 FAM50AQ14320 339 aaKnown RBP34.37■■■■□ 3.09
SDHA-202ENST00000502379 ANKRD30AQ9BXX3 1397 aa34.36■■■■□ 3.09
SDHA-202ENST00000502379 THEMISQ8N1K5 641 aaPredicted RBP34.36■■■■□ 3.09
SDHA-202ENST00000502379 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.36■■■■□ 3.09
SDHA-202ENST00000502379 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.36■■■■□ 3.09
SDHA-202ENST00000502379 SPATA31D1Q6ZQQ2 1576 aa34.35■■■■□ 3.09
SDHA-202ENST00000502379 CEP152O94986 1710 aa34.35■■■■□ 3.09
SDHA-202ENST00000502379 ERVK-7P63135 1459 aa34.34■■■■□ 3.09
SDHA-202ENST00000502379 PRDM15P57071 1507 aaPredicted RBP34.32■■■■□ 3.08
SDHA-202ENST00000502379 UGGT1Q9NYU2 1555 aa34.32■■■■□ 3.08
SDHA-202ENST00000502379 ANKLE2Q86XL3 938 aa34.31■■■■□ 3.08
SDHA-202ENST00000502379 NEURL4Q96JN8 1562 aa34.28■■■■□ 3.08
SDHA-202ENST00000502379 ARHGAP31Q2M1Z3 1444 aa34.26■■■■□ 3.07
SDHA-202ENST00000502379 IQSEC2Q5JU85 1478 aa34.26■■■■□ 3.07
SDHA-202ENST00000502379 CFAP65Q6ZU64 1925 aaKnown RBP34.26■■■■□ 3.07
SDHA-202ENST00000502379 DEPDC5O75140 1603 aa34.25■■■■□ 3.07
SDHA-202ENST00000502379 ADGRL2O95490 1459 aa34.25■■■■□ 3.07
SDHA-202ENST00000502379 POLR1AO95602 1720 aaPredicted RBP34.24■■■■□ 3.07
SDHA-202ENST00000502379 KANK1Q14678 1352 aa34.23■■■■□ 3.07
SDHA-202ENST00000502379 PPARGC1BQ86YN6 1023 aaKnown RBP34.19■■■■□ 3.06
SDHA-202ENST00000502379 NPHP4O75161 1426 aaPredicted RBP34.17■■■■□ 3.06
SDHA-202ENST00000502379 MED14O60244 1454 aa34.16■■■■□ 3.06
SDHA-202ENST00000502379 VWDEQ8N2E2 1590 aa34.15■■■■□ 3.06
SDHA-202ENST00000502379 LMTK2Q8IWU2 1503 aa34.14■■■■□ 3.06
SDHA-202ENST00000502379 ANKRD50Q9ULJ7 1429 aa34.13■■■■□ 3.05
SDHA-202ENST00000502379 UBR1Q8IWV7 1749 aa34.11■■■■□ 3.05
SDHA-202ENST00000502379 UBAP1LF5GYI3 381 aa34.1■■■■□ 3.05
SDHA-202ENST00000502379 LTKP29376 864 aa34.06■■■■□ 3.04
SDHA-202ENST00000502379 IQGAP1P46940 1657 aa34.04■■■■□ 3.04
SDHA-202ENST00000502379 IDI1Q13907 227 aa34.04■■■■□ 3.04
SDHA-202ENST00000502379 TXNDC2Q86VQ3 553 aa34.03■■■■□ 3.04
SDHA-202ENST00000502379 CPS1P31327 1500 aa34.03■■■■□ 3.04
SDHA-202ENST00000502379 ARHGAP23Q9P227 1491 aa34.02■■■■□ 3.04
SDHA-202ENST00000502379 EFCAB6Q5THR3 1501 aa34.02■■■■□ 3.04
SDHA-202ENST00000502379 PIK3C2BO00750 1634 aa34.01■■■■□ 3.04
SDHA-202ENST00000502379 SCAF11Q99590 1463 aaKnown RBP34.01■■■■□ 3.03
SDHA-202ENST00000502379 SLIT1O75093 1534 aa34■■■■□ 3.03
SDHA-202ENST00000502379 NOS1P29475 1434 aa34■■■■□ 3.03
SDHA-202ENST00000502379 ITGAEP38570 1179 aa34■■■■□ 3.03
SDHA-202ENST00000502379 STAG3Q9UJ98 1225 aa34■■■■□ 3.03
SDHA-202ENST00000502379 ROCK1Q13464 1354 aa33.99■■■■□ 3.03
SDHA-202ENST00000502379 SYNMO15061 1565 aa33.98■■■■□ 3.03
SDHA-202ENST00000502379 TMEM2Q9UHN6 1383 aa33.97■■■■□ 3.03
SDHA-202ENST00000502379 EID1Q9Y6B2 187 aa33.95■■■■□ 3.03
SDHA-202ENST00000502379 SLC52A1Q9NWF4 448 aa33.9■■■■□ 3.02
SDHA-202ENST00000502379 RPRD2Q5VT52 1461 aaKnown RBP33.89■■■■□ 3.02
SDHA-202ENST00000502379 STRCP1A6NGW2 1772 aa33.88■■■■□ 3.01
SDHA-202ENST00000502379 UNC13BO14795 1591 aa33.88■■■■□ 3.01
SDHA-202ENST00000502379 TOM1O60784 492 aa33.87■■■■□ 3.01
SDHA-202ENST00000502379 TET3O43151 1660 aa33.87■■■■□ 3.01
SDHA-202ENST00000502379 KDM5AP29375 1690 aaKnown RBP33.86■■■■□ 3.01
SDHA-202ENST00000502379 PIP4K2BP78356 416 aa33.85■■■■□ 3.01
SDHA-202ENST00000502379 LRRC7Q96NW7 1537 aa33.84■■■■□ 3.01
SDHA-202ENST00000502379 SCAF1Q9H7N4 1312 aaKnown RBP33.83■■■■□ 3.01
SDHA-202ENST00000502379 ADGRB3O60242 1522 aa33.82■■■■□ 3
SDHA-202ENST00000502379 NUP155O75694 1391 aa33.8■■■■□ 3
SDHA-202ENST00000502379 DISP3Q9P2K9 1392 aa33.79■■■■□ 3
SDHA-202ENST00000502379 GCC2Q8IWJ2 1684 aa33.78■■■■□ 3
SDHA-202ENST00000502379 RRBP1Q9P2E9 1410 aaKnown RBP33.76■■■□□ 2.99
SDHA-202ENST00000502379 SLC26A8Q96RN1 970 aa33.75■■■□□ 2.99
SDHA-202ENST00000502379 IQGAP3Q86VI3 1631 aa33.75■■■□□ 2.99
SDHA-202ENST00000502379 ALKQ9UM73 1620 aa33.75■■■□□ 2.99
SDHA-202ENST00000502379 HSPA1LP34931 641 aa33.74■■■□□ 2.99
SDHA-202ENST00000502379 E9PCH4 1651 aa33.74■■■□□ 2.99
SDHA-202ENST00000502379 SENP3Q9H4L4 574 aaPredicted RBP33.7■■■□□ 2.99
SDHA-202ENST00000502379 CHGAP10645 457 aaKnown RBP33.69■■■□□ 2.98
SDHA-202ENST00000502379 ZFYVE9O95405 1425 aa33.69■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms