RNA–Protein interactions for RNA: ENST00000502315.1

SH3RF1-202, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 487 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-202ENST00000502315 MAP3K1Q13233 1512 aa11.38□□□□□ -0.59
SH3RF1-202ENST00000502315 ZNF644Q9H582 1327 aaPredicted RBP11.37□□□□□ -0.59
SH3RF1-202ENST00000502315 CEP170BQ9Y4F5 1589 aaPredicted RBP11.37□□□□□ -0.59
SH3RF1-202ENST00000502315 CLTCQ00610 1675 aaKnown RBP11.37□□□□□ -0.59
SH3RF1-202ENST00000502315 THEMISQ8N1K5 641 aaPredicted RBP11.37□□□□□ -0.59
SH3RF1-202ENST00000502315 NCOA2Q15596 1464 aa11.37□□□□□ -0.59
SH3RF1-202ENST00000502315 ARHGEF5Q12774 1597 aa11.37□□□□□ -0.59
SH3RF1-202ENST00000502315 WASHC2CQ9Y4E1 1318 aa11.36□□□□□ -0.59
SH3RF1-202ENST00000502315 KIF3BO15066 747 aa11.36□□□□□ -0.59
SH3RF1-202ENST00000502315 PZPP20742 1482 aa11.36□□□□□ -0.59
SH3RF1-202ENST00000502315 NLRP1Q9C000 1473 aa11.36□□□□□ -0.59
SH3RF1-202ENST00000502315 NCKAP5LQ9HCH0 1330 aa11.35□□□□□ -0.59
SH3RF1-202ENST00000502315 MIA2Q96PC5 1412 aa11.35□□□□□ -0.59
SH3RF1-202ENST00000502315 MYO3AQ8NEV4 1616 aa11.35□□□□□ -0.59
SH3RF1-202ENST00000502315 KDM5DQ9BY66 1539 aa11.35□□□□□ -0.59
SH3RF1-202ENST00000502315 CAMSAP2Q08AD1 1489 aa11.34□□□□□ -0.59
SH3RF1-202ENST00000502315 TNRQ92752 1358 aa11.34□□□□□ -0.59
SH3RF1-202ENST00000502315 ANKLE2Q86XL3 938 aa11.34□□□□□ -0.59
SH3RF1-202ENST00000502315 VPS8Q8N3P4 1428 aa11.33□□□□□ -0.6
SH3RF1-202ENST00000502315 LRRC9Q6ZRR7 1453 aa11.32□□□□□ -0.6
SH3RF1-202ENST00000502315 DNMT1P26358 1616 aaKnown RBP11.32□□□□□ -0.6
SH3RF1-202ENST00000502315 CPS1P31327 1500 aa11.32□□□□□ -0.6
SH3RF1-202ENST00000502315 MAST1Q9Y2H9 1570 aa11.32□□□□□ -0.6
SH3RF1-202ENST00000502315 MED14O60244 1454 aa11.32□□□□□ -0.6
SH3RF1-202ENST00000502315 DISP3Q9P2K9 1392 aa11.31□□□□□ -0.6
SH3RF1-202ENST00000502315 SOCS7O14512 581 aa11.31□□□□□ -0.6
SH3RF1-202ENST00000502315 ZNF335Q9H4Z2 1342 aaPredicted RBP11.31□□□□□ -0.6
SH3RF1-202ENST00000502315 MYOM3Q5VTT5 1437 aa11.3□□□□□ -0.6
SH3RF1-202ENST00000502315 TOM1O60784 492 aa11.3□□□□□ -0.6
SH3RF1-202ENST00000502315 UBAP1LF5GYI3 381 aa11.29□□□□□ -0.6
SH3RF1-202ENST00000502315 DEPDC5O75140 1603 aa11.28□□□□□ -0.6
SH3RF1-202ENST00000502315 EIF2AK4Q9P2K8 1649 aaKnown RBP11.28□□□□□ -0.6
SH3RF1-202ENST00000502315 ZC3H13Q5T200 1668 aaKnown RBP11.28□□□□□ -0.6
SH3RF1-202ENST00000502315 FBXO31Q5XUX0 539 aaPredicted RBP11.28□□□□□ -0.6
SH3RF1-202ENST00000502315 RNF17Q9BXT8 1623 aaKnown RBP11.27□□□□□ -0.6
SH3RF1-202ENST00000502315 SHANK2Q9UPX8 1470 aa11.27□□□□□ -0.6
SH3RF1-202ENST00000502315 UGGT1Q9NYU2 1555 aa11.27□□□□□ -0.61
SH3RF1-202ENST00000502315 ARHGAP31Q2M1Z3 1444 aa11.26□□□□□ -0.61
SH3RF1-202ENST00000502315 DUOX2Q9NRD8 1548 aa11.25□□□□□ -0.61
SH3RF1-202ENST00000502315 SPATA31D1Q6ZQQ2 1576 aa11.25□□□□□ -0.61
SH3RF1-202ENST00000502315 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.25□□□□□ -0.61
SH3RF1-202ENST00000502315 POLR1AO95602 1720 aaPredicted RBP11.24□□□□□ -0.61
SH3RF1-202ENST00000502315 APLP2Q06481 763 aa11.24□□□□□ -0.61
SH3RF1-202ENST00000502315 NPHP4O75161 1426 aaPredicted RBP11.24□□□□□ -0.61
SH3RF1-202ENST00000502315 ERBINQ96RT1 1412 aa11.24□□□□□ -0.61
SH3RF1-202ENST00000502315 ABCC3O15438 1527 aa11.24□□□□□ -0.61
SH3RF1-202ENST00000502315 NEURL4Q96JN8 1562 aa11.23□□□□□ -0.61
SH3RF1-202ENST00000502315 ERVK-7P63135 1459 aa11.22□□□□□ -0.61
SH3RF1-202ENST00000502315 ILDR2Q71H61 639 aa11.22□□□□□ -0.61
SH3RF1-202ENST00000502315 SCAF1Q9H7N4 1312 aaKnown RBP11.21□□□□□ -0.61
SH3RF1-202ENST00000502315 KANK4Q5T7N3 995 aaPredicted RBP11.21□□□□□ -0.61
SH3RF1-202ENST00000502315 KANK1Q14678 1352 aa11.2□□□□□ -0.62
SH3RF1-202ENST00000502315 CACNB1Q02641 598 aaPredicted RBP11.2□□□□□ -0.62
SH3RF1-202ENST00000502315 EID1Q9Y6B2 187 aa11.2□□□□□ -0.62
SH3RF1-202ENST00000502315 VWDEQ8N2E2 1590 aa11.2□□□□□ -0.62
SH3RF1-202ENST00000502315 KIF15Q9NS87 1388 aa11.19□□□□□ -0.62
SH3RF1-202ENST00000502315 SLIT1O75093 1534 aa11.19□□□□□ -0.62
SH3RF1-202ENST00000502315 PRDM15P57071 1507 aaPredicted RBP11.19□□□□□ -0.62
SH3RF1-202ENST00000502315 ARHGAP23Q9P227 1491 aa11.19□□□□□ -0.62
SH3RF1-202ENST00000502315 ABCC5O15440 1437 aa11.18□□□□□ -0.62
SH3RF1-202ENST00000502315 IQGAP1P46940 1657 aa11.18□□□□□ -0.62
SH3RF1-202ENST00000502315 LOC105371045A0A1W2PR82 267 aa11.18□□□□□ -0.62
SH3RF1-202ENST00000502315 KDM5AP29375 1690 aaKnown RBP11.17□□□□□ -0.62
SH3RF1-202ENST00000502315 ANKRD30AQ9BXX3 1397 aa11.17□□□□□ -0.62
SH3RF1-202ENST00000502315 SLC52A1Q9NWF4 448 aa11.17□□□□□ -0.62
SH3RF1-202ENST00000502315 LMTK2Q8IWU2 1503 aa11.17□□□□□ -0.62
SH3RF1-202ENST00000502315 SCAF11Q99590 1463 aaKnown RBP11.17□□□□□ -0.62
SH3RF1-202ENST00000502315 MROH1Q8NDA8 1641 aa11.17□□□□□ -0.62
SH3RF1-202ENST00000502315 SYNMO15061 1565 aa11.16□□□□□ -0.62
SH3RF1-202ENST00000502315 TXNDC2Q86VQ3 553 aa11.16□□□□□ -0.62
SH3RF1-202ENST00000502315 HSPA1LP34931 641 aa11.15□□□□□ -0.62
SH3RF1-202ENST00000502315 HDGFP51858 240 aaKnown RBP11.15□□□□□ -0.62
SH3RF1-202ENST00000502315 RRP7BPQ9NSQ0 103 aa11.15□□□□□ -0.62
SH3RF1-202ENST00000502315 DAPK1P53355 1430 aa11.15□□□□□ -0.62
SH3RF1-202ENST00000502315 FGD6Q6ZV73 1430 aa11.15□□□□□ -0.62
SH3RF1-202ENST00000502315 LRRC7Q96NW7 1537 aa11.14□□□□□ -0.63
SH3RF1-202ENST00000502315 PIP4K2BP78356 416 aa11.14□□□□□ -0.63
SH3RF1-202ENST00000502315 UBR1Q8IWV7 1749 aa11.14□□□□□ -0.63
SH3RF1-202ENST00000502315 TMEM2Q9UHN6 1383 aa11.14□□□□□ -0.63
SH3RF1-202ENST00000502315 PTPN23Q9H3S7 1636 aa11.13□□□□□ -0.63
SH3RF1-202ENST00000502315 RPRD2Q5VT52 1461 aaKnown RBP11.12□□□□□ -0.63
SH3RF1-202ENST00000502315 CROCC2H7BZ55 1655 aa11.12□□□□□ -0.63
SH3RF1-202ENST00000502315 LTKP29376 864 aa11.12□□□□□ -0.63
SH3RF1-202ENST00000502315 STAG3Q9UJ98 1225 aa11.12□□□□□ -0.63
SH3RF1-202ENST00000502315 ADGRL2O95490 1459 aa11.12□□□□□ -0.63
SH3RF1-202ENST00000502315 NOS1P29475 1434 aa11.11□□□□□ -0.63
SH3RF1-202ENST00000502315 KCNA6P17658 529 aa11.11□□□□□ -0.63
SH3RF1-202ENST00000502315 IDI1Q13907 227 aa11.11□□□□□ -0.63
SH3RF1-202ENST00000502315 FAM135BQ49AJ0 1406 aa11.1□□□□□ -0.63
SH3RF1-202ENST00000502315 CEP152O94986 1710 aa11.09□□□□□ -0.63
SH3RF1-202ENST00000502315 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.09□□□□□ -0.63
SH3RF1-202ENST00000502315 EFCAB6Q5THR3 1501 aa11.09□□□□□ -0.63
SH3RF1-202ENST00000502315 MED1Q15648 1581 aaPredicted RBP11.08□□□□□ -0.64
SH3RF1-202ENST00000502315 ALKQ9UM73 1620 aa11.08□□□□□ -0.64
SH3RF1-202ENST00000502315 NCOA3Q9Y6Q9 1424 aa11.08□□□□□ -0.64
SH3RF1-202ENST00000502315 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.07□□□□□ -0.64
SH3RF1-202ENST00000502315 TET3O43151 1660 aa11.06□□□□□ -0.64
SH3RF1-202ENST00000502315 ANKRD50Q9ULJ7 1429 aa11.06□□□□□ -0.64
SH3RF1-202ENST00000502315 PIK3C2BO00750 1634 aa11.06□□□□□ -0.64
SH3RF1-202ENST00000502315 STRCP1A6NGW2 1772 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms