RNA–Protein interactions for RNA: ENST00000499786.4

MED28-202, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-202ENST00000499786 KIAA0556O60303 1618 aa10.64□□□□□ -0.71
MED28-202ENST00000499786 HECW1Q76N89 1606 aa10.64□□□□□ -0.71
MED28-202ENST00000499786 HAP1P54257 671 aaPredicted RBP10.63□□□□□ -0.71
MED28-202ENST00000499786 NUP160Q12769 1436 aa10.63□□□□□ -0.71
MED28-202ENST00000499786 CHD1O14646 1710 aa10.63□□□□□ -0.71
MED28-202ENST00000499786 CCDC18Q5T9S5 1454 aa10.61□□□□□ -0.71
MED28-202ENST00000499786 METRNQ9UJH8 293 aa10.61□□□□□ -0.71
MED28-202ENST00000499786 ATP1B4Q9UN42 357 aaPredicted RBP10.61□□□□□ -0.71
MED28-202ENST00000499786 CARMIL2Q6F5E8 1435 aa10.6□□□□□ -0.71
MED28-202ENST00000499786 LRRC9Q6ZRR7 1453 aa10.58□□□□□ -0.72
MED28-202ENST00000499786 PLCG2P16885 1265 aa10.58□□□□□ -0.72
MED28-202ENST00000499786 TMEM121BQ9BXQ6 578 aaPredicted RBP10.58□□□□□ -0.72
MED28-202ENST00000499786 CADPS2Q86UW7 1296 aa10.57□□□□□ -0.72
MED28-202ENST00000499786 KDM2AQ9Y2K7 1162 aa10.57□□□□□ -0.72
MED28-202ENST00000499786 EHBP1L1Q8N3D4 1523 aa10.57□□□□□ -0.72
MED28-202ENST00000499786 VSIG10Q8N0Z9 540 aa10.56□□□□□ -0.72
MED28-202ENST00000499786 DISP1Q96F81 1524 aa10.56□□□□□ -0.72
MED28-202ENST00000499786 RAPGEF6Q8TEU7 1601 aa10.55□□□□□ -0.72
MED28-202ENST00000499786 SEC24BO95487 1268 aa10.55□□□□□ -0.72
MED28-202ENST00000499786 MTUS2Q5JR59 1369 aa10.54□□□□□ -0.72
MED28-202ENST00000499786 SUPT6HQ7KZ85 1726 aaKnown RBP10.53□□□□□ -0.72
MED28-202ENST00000499786 HRCP23327 699 aa10.53□□□□□ -0.72
MED28-202ENST00000499786 KANK4Q5T7N3 995 aaPredicted RBP10.53□□□□□ -0.72
MED28-202ENST00000499786 RRBP1Q9P2E9 1410 aaKnown RBP10.52□□□□□ -0.73
MED28-202ENST00000499786 MICALL2Q8IY33 904 aa10.52□□□□□ -0.73
MED28-202ENST00000499786 BOLA1Q9Y3E2 137 aa10.52□□□□□ -0.73
MED28-202ENST00000499786 LRRIQ1Q96JM4 1722 aa10.52□□□□□ -0.73
MED28-202ENST00000499786 EPRSP07814 1512 aaKnown RBP10.51□□□□□ -0.73
MED28-202ENST00000499786 CCNB3Q8WWL7 1395 aa10.51□□□□□ -0.73
MED28-202ENST00000499786 JPH4Q96JJ6 628 aa10.5□□□□□ -0.73
MED28-202ENST00000499786 L3MBTL3Q96JM7 780 aaPredicted RBP10.5□□□□□ -0.73
MED28-202ENST00000499786 SHROOM2Q13796 1616 aa10.5□□□□□ -0.73
MED28-202ENST00000499786 POTEB2H3BUK9 544 aa10.49□□□□□ -0.73
MED28-202ENST00000499786 ZEB1P37275 1124 aaPredicted RBP10.49□□□□□ -0.73
MED28-202ENST00000499786 PRG4Q92954 1404 aaPredicted RBP10.49□□□□□ -0.73
MED28-202ENST00000499786 POTEJP0CG39 1038 aa10.48□□□□□ -0.73
MED28-202ENST00000499786 CDK13Q14004 1512 aaKnown RBP10.48□□□□□ -0.73
MED28-202ENST00000499786 NCKAP5LQ9HCH0 1330 aa10.47□□□□□ -0.73
MED28-202ENST00000499786 CLASP1Q7Z460 1538 aa10.47□□□□□ -0.73
MED28-202ENST00000499786 CRISPLD2Q9H0B8 497 aa10.46□□□□□ -0.73
MED28-202ENST00000499786 CDK11AQ9UQ88 783 aaPredicted RBP10.46□□□□□ -0.73
MED28-202ENST00000499786 NUP153P49790 1475 aaKnown RBP10.46□□□□□ -0.74
MED28-202ENST00000499786 NCOA2Q15596 1464 aa10.45□□□□□ -0.74
MED28-202ENST00000499786 PHLDB1Q86UU1 1377 aa10.45□□□□□ -0.74
MED28-202ENST00000499786 ABCA8O94911 1581 aa10.44□□□□□ -0.74
MED28-202ENST00000499786 PLB1Q6P1J6 1458 aa10.43□□□□□ -0.74
MED28-202ENST00000499786 PTPRGP23470 1445 aa10.43□□□□□ -0.74
MED28-202ENST00000499786 MYOM3Q5VTT5 1437 aa10.43□□□□□ -0.74
MED28-202ENST00000499786 FGD6Q6ZV73 1430 aa10.43□□□□□ -0.74
MED28-202ENST00000499786 CCER1Q8TC90 406 aaPredicted RBP10.43□□□□□ -0.74
MED28-202ENST00000499786 TMEM92Q6UXU6 159 aa10.42□□□□□ -0.74
MED28-202ENST00000499786 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.41□□□□□ -0.74
MED28-202ENST00000499786 ITSN2Q9NZM3 1697 aa10.41□□□□□ -0.74
MED28-202ENST00000499786 KIF3CO14782 793 aa10.41□□□□□ -0.74
MED28-202ENST00000499786 FAM50AQ14320 339 aaKnown RBP10.41□□□□□ -0.74
MED28-202ENST00000499786 MFSD10Q14728 455 aa10.41□□□□□ -0.74
MED28-202ENST00000499786 ARHGEF11O15085 1522 aa10.41□□□□□ -0.74
MED28-202ENST00000499786 MAGI3Q5TCQ9 1506 aa10.41□□□□□ -0.74
MED28-202ENST00000499786 KIF14Q15058 1648 aa10.4□□□□□ -0.74
MED28-202ENST00000499786 ADCY10Q96PN6 1610 aa10.4□□□□□ -0.74
MED28-202ENST00000499786 ARID3CA6NKF2 412 aa10.4□□□□□ -0.74
MED28-202ENST00000499786 PDE4AP27815 886 aa10.4□□□□□ -0.74
MED28-202ENST00000499786 GPHNQ9NQX3 736 aaPredicted RBP10.4□□□□□ -0.74
MED28-202ENST00000499786 TROQ12816 1431 aaPredicted RBP10.4□□□□□ -0.75
MED28-202ENST00000499786 PTPN23Q9H3S7 1636 aa10.4□□□□□ -0.75
MED28-202ENST00000499786 UACAQ9BZF9 1416 aa10.38□□□□□ -0.75
MED28-202ENST00000499786 ABCC2Q92887 1545 aa10.38□□□□□ -0.75
MED28-202ENST00000499786 G3V3G9 751 aa10.37□□□□□ -0.75
MED28-202ENST00000499786 ITGAEP38570 1179 aa10.37□□□□□ -0.75
MED28-202ENST00000499786 MIA2Q96PC5 1412 aa10.37□□□□□ -0.75
MED28-202ENST00000499786 LARP6Q9BRS8 491 aaKnown RBP10.36□□□□□ -0.75
MED28-202ENST00000499786 C2orf72A6NCS6 295 aa10.35□□□□□ -0.75
MED28-202ENST00000499786 TCOF1Q13428 1488 aaKnown RBP10.35□□□□□ -0.75
MED28-202ENST00000499786 ERCC6L2Q5T890 1561 aa10.35□□□□□ -0.75
MED28-202ENST00000499786 PLEKHD1A6NEE1 506 aa10.34□□□□□ -0.75
MED28-202ENST00000499786 FOXK1P85037 733 aa10.33□□□□□ -0.76
MED28-202ENST00000499786 UHRF1BP1LA0JNW5 1464 aa10.33□□□□□ -0.76
MED28-202ENST00000499786 ATP10BO94823 1461 aa10.33□□□□□ -0.76
MED28-202ENST00000499786 DSG2Q14126 1118 aa10.32□□□□□ -0.76
MED28-202ENST00000499786 DDX27Q96GQ7 796 aaKnown RBP10.32□□□□□ -0.76
MED28-202ENST00000499786 SETD5Q9C0A6 1442 aa10.32□□□□□ -0.76
MED28-202ENST00000499786 CAMK2BQ13554 666 aa10.31□□□□□ -0.76
MED28-202ENST00000499786 C3orf67Q6ZVT6 689 aa10.31□□□□□ -0.76
MED28-202ENST00000499786 TMC2Q8TDI7 906 aa10.31□□□□□ -0.76
MED28-202ENST00000499786 ZCCHC11Q5TAX3 1644 aaKnown RBP10.3□□□□□ -0.76
MED28-202ENST00000499786 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.3□□□□□ -0.76
MED28-202ENST00000499786 PPP1R15BQ5SWA1 713 aa10.29□□□□□ -0.76
MED28-202ENST00000499786 WDR70Q9NW82 654 aa10.29□□□□□ -0.76
MED28-202ENST00000499786 CLSPNQ9HAW4 1339 aa10.29□□□□□ -0.76
MED28-202ENST00000499786 CAMSAP2Q08AD1 1489 aa10.29□□□□□ -0.76
MED28-202ENST00000499786 DNMT1P26358 1616 aaKnown RBP10.29□□□□□ -0.76
MED28-202ENST00000499786 GCC2Q8IWJ2 1684 aa10.28□□□□□ -0.76
MED28-202ENST00000499786 RAB3GAP2Q9H2M9 1393 aa10.28□□□□□ -0.76
MED28-202ENST00000499786 CDC42BPAQ5VT25 1732 aa10.28□□□□□ -0.76
MED28-202ENST00000499786 AKNAQ7Z591 1439 aa10.28□□□□□ -0.76
MED28-202ENST00000499786 MAMSTRQ6ZN01 415 aa10.28□□□□□ -0.76
MED28-202ENST00000499786 HFM1A2PYH4 1435 aa10.27□□□□□ -0.77
MED28-202ENST00000499786 PREX2Q70Z35 1606 aa10.27□□□□□ -0.77
MED28-202ENST00000499786 OTUD5Q96G74 571 aa10.27□□□□□ -0.77
MED28-202ENST00000499786 CFDP1Q9UEE9 299 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms