RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 RSPH6AQ9H0K4 717 aa5.83□□□□□ -1.48
CLTC-209ENST00000498711 CLSPNQ9HAW4 1339 aa5.83□□□□□ -1.48
CLTC-209ENST00000498711 GRIN2AQ12879 1464 aa5.83□□□□□ -1.48
CLTC-209ENST00000498711 PRKAR2AP13861 404 aaKnown RBP5.82□□□□□ -1.48
CLTC-209ENST00000498711 PODXL2Q9NZ53 605 aa5.82□□□□□ -1.48
CLTC-209ENST00000498711 C19orf67A6NJJ6 358 aa5.82□□□□□ -1.48
CLTC-209ENST00000498711 UBTFP17480 764 aaKnown RBP5.82□□□□□ -1.48
CLTC-209ENST00000498711 PRXQ9BXM0 1461 aa5.82□□□□□ -1.48
CLTC-209ENST00000498711 CENPBP07199 599 aaPredicted RBP5.81□□□□□ -1.48
CLTC-209ENST00000498711 PDE4DQ08499 809 aa5.81□□□□□ -1.48
CLTC-209ENST00000498711 TRIM66O15016 1216 aa5.81□□□□□ -1.48
CLTC-209ENST00000498711 GOLGA2Q08379 1002 aa5.81□□□□□ -1.48
CLTC-209ENST00000498711 RAD54L2Q9Y4B4 1467 aa5.81□□□□□ -1.48
CLTC-209ENST00000498711 MYT1Q01538 1121 aa5.79□□□□□ -1.48
CLTC-209ENST00000498711 PPP1R15BQ5SWA1 713 aa5.79□□□□□ -1.48
CLTC-209ENST00000498711 AQRO60306 1485 aaKnown RBP eCLIP5.79□□□□□ -1.486e-13■■■□□ 18.8
CLTC-209ENST00000498711 ARAP1Q96P48 1450 aa5.79□□□□□ -1.48
CLTC-209ENST00000498711 RAPGEF2Q9Y4G8 1499 aa5.79□□□□□ -1.48
CLTC-209ENST00000498711 CEP170Q5SW79 1584 aa5.79□□□□□ -1.48
CLTC-209ENST00000498711 RRBP1Q9P2E9 1410 aaKnown RBP5.78□□□□□ -1.48
CLTC-209ENST00000498711 SPDYE16A6NNV3 312 aaPredicted RBP5.77□□□□□ -1.49
CLTC-209ENST00000498711 GPHNQ9NQX3 736 aaPredicted RBP5.77□□□□□ -1.49
CLTC-209ENST00000498711 MAP3K1Q13233 1512 aa5.77□□□□□ -1.49
CLTC-209ENST00000498711 PDIA6Q15084 440 aa5.77□□□□□ -1.49
CLTC-209ENST00000498711 DPYSL4O14531 572 aa5.76□□□□□ -1.49
CLTC-209ENST00000498711 MKRN3Q13064 507 aaKnown RBP5.76□□□□□ -1.49
CLTC-209ENST00000498711 MAPKBP1O60336 1514 aa5.76□□□□□ -1.49
CLTC-209ENST00000498711 KIF27Q86VH2 1401 aa5.76□□□□□ -1.49
CLTC-209ENST00000498711 TMEM106CQ9BVX2 250 aa5.75□□□□□ -1.49
CLTC-209ENST00000498711 DHX57Q6P158 1386 aaKnown RBP5.75□□□□□ -1.49
CLTC-209ENST00000498711 FAM117AQ9C073 453 aa5.75□□□□□ -1.49
CLTC-209ENST00000498711 GPR37O15354 613 aa5.75□□□□□ -1.49
CLTC-209ENST00000498711 DDRGK1Q96HY6 314 aa5.75□□□□□ -1.49
CLTC-209ENST00000498711 EMILIN3Q9NT22 766 aa5.75□□□□□ -1.49
CLTC-209ENST00000498711 KIAA0586Q9BVV6 1533 aa5.74□□□□□ -1.49
CLTC-209ENST00000498711 CTTNBP2Q8WZ74 1663 aa5.74□□□□□ -1.49
CLTC-209ENST00000498711 RANGAP1P46060 587 aaPredicted RBP5.74□□□□□ -1.49
CLTC-209ENST00000498711 MINK1Q8N4C8 1332 aaPredicted RBP5.73□□□□□ -1.49
CLTC-209ENST00000498711 UHRF1BP1LA0JNW5 1464 aa5.73□□□□□ -1.49
CLTC-209ENST00000498711 UGGT2Q9NYU1 1516 aa5.73□□□□□ -1.49
CLTC-209ENST00000498711 HAX1O00165 279 aa5.73□□□□□ -1.49
CLTC-209ENST00000498711 ARID3AQ99856 593 aa5.73□□□□□ -1.49
CLTC-209ENST00000498711 ZRANB1Q9UGI0 708 aa5.73□□□□□ -1.49
CLTC-209ENST00000498711 TDRD9Q8NDG6 1382 aaKnown RBP5.72□□□□□ -1.49
CLTC-209ENST00000498711 MAP2K5Q13163 448 aa5.72□□□□□ -1.49
CLTC-209ENST00000498711 FLIIQ13045 1269 aa5.72□□□□□ -1.49
CLTC-209ENST00000498711 C1orf115Q9H7X2 142 aa5.72□□□□□ -1.49
CLTC-209ENST00000498711 GLI2P10070 1586 aa5.72□□□□□ -1.49
CLTC-209ENST00000498711 PLEKHG3A1L390 1219 aa5.71□□□□□ -1.49
CLTC-209ENST00000498711 DSG2Q14126 1118 aa5.71□□□□□ -1.49
CLTC-209ENST00000498711 AMHR2Q16671 573 aa5.71□□□□□ -1.49
CLTC-209ENST00000498711 CCDC102AQ96A19 550 aa5.71□□□□□ -1.49
CLTC-209ENST00000498711 PHF12Q96QT6 1004 aa5.71□□□□□ -1.49
CLTC-209ENST00000498711 IQGAP2Q13576 1575 aa5.71□□□□□ -1.49
CLTC-209ENST00000498711 ILDR1Q86SU0 546 aaPredicted RBP5.71□□□□□ -1.5
CLTC-209ENST00000498711 ARHGAP35Q9NRY4 1499 aa5.7□□□□□ -1.5
CLTC-209ENST00000498711 CD44P16070 742 aaKnown RBP5.7□□□□□ -1.5
CLTC-209ENST00000498711 PARP9Q8IXQ6 854 aa5.7□□□□□ -1.5
CLTC-209ENST00000498711 IRF6O14896 467 aa5.69□□□□□ -1.5
CLTC-209ENST00000498711 FOXK1P85037 733 aa5.69□□□□□ -1.5
CLTC-209ENST00000498711 TMC2Q8TDI7 906 aa5.69□□□□□ -1.5
CLTC-209ENST00000498711 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.69□□□□□ -1.5
CLTC-209ENST00000498711 NUTM2FA1L443 756 aa5.69□□□□□ -1.5
CLTC-209ENST00000498711 GOPCQ9HD26 462 aa5.69□□□□□ -1.5
CLTC-209ENST00000498711 ARID3CA6NKF2 412 aa5.68□□□□□ -1.5
CLTC-209ENST00000498711 APBB1O00213 710 aa5.68□□□□□ -1.5
CLTC-209ENST00000498711 KIF13AQ9H1H9 1805 aa5.68□□□□□ -1.5
CLTC-209ENST00000498711 CHMP7Q8WUX9 453 aaPredicted RBP5.68□□□□□ -1.5
CLTC-209ENST00000498711 KIAA0556O60303 1618 aa5.68□□□□□ -1.5
CLTC-209ENST00000498711 GRXCR2A6NFK2 248 aa5.68□□□□□ -1.5
CLTC-209ENST00000498711 TRPC6Q9Y210 931 aa5.68□□□□□ -1.5
CLTC-209ENST00000498711 GNPATO15228 680 aa5.67□□□□□ -1.5
CLTC-209ENST00000498711 ADCY10Q96PN6 1610 aa5.67□□□□□ -1.5
CLTC-209ENST00000498711 DIP2BQ9P265 1576 aa5.67□□□□□ -1.5
CLTC-209ENST00000498711 IGF1RP08069 1367 aa5.67□□□□□ -1.5
CLTC-209ENST00000498711 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.67□□□□□ -1.5
CLTC-209ENST00000498711 KANK4Q5T7N3 995 aaPredicted RBP5.67□□□□□ -1.5
CLTC-209ENST00000498711 TIAM1Q13009 1591 aa5.66□□□□□ -1.5
CLTC-209ENST00000498711 HIC1Q14526 733 aa5.66□□□□□ -1.5
CLTC-209ENST00000498711 MS4A3Q96HJ5 214 aa5.66□□□□□ -1.5
CLTC-209ENST00000498711 SAMD9Q5K651 1589 aa5.66□□□□□ -1.5
CLTC-209ENST00000498711 CCNB3Q8WWL7 1395 aa5.66□□□□□ -1.5
CLTC-209ENST00000498711 ONECUT3O60422 494 aaPredicted RBP5.66□□□□□ -1.5
CLTC-209ENST00000498711 TTLL12Q14166 644 aaPredicted RBP5.66□□□□□ -1.5
CLTC-209ENST00000498711 MICALL2Q8IY33 904 aa5.66□□□□□ -1.5
CLTC-209ENST00000498711 ABCC2Q92887 1545 aa5.66□□□□□ -1.5
CLTC-209ENST00000498711 CARMIL2Q6F5E8 1435 aa5.66□□□□□ -1.5
CLTC-209ENST00000498711 CFAP43Q8NDM7 1665 aa5.65□□□□□ -1.5
CLTC-209ENST00000498711 FCHSD2O94868 740 aa5.65□□□□□ -1.5
CLTC-209ENST00000498711 TIE1P35590 1138 aa5.65□□□□□ -1.5
CLTC-209ENST00000498711 TTLL13PA6NNM8 815 aa5.65□□□□□ -1.51
CLTC-209ENST00000498711 MAP3K9P80192 1104 aa5.65□□□□□ -1.51
CLTC-209ENST00000498711 PLPP6Q8IY26 295 aa5.65□□□□□ -1.51
CLTC-209ENST00000498711 EFCAB5A4FU69 1503 aa5.65□□□□□ -1.51
CLTC-209ENST00000498711 OSBPP22059 807 aa5.64□□□□□ -1.51
CLTC-209ENST00000498711 ERCC6L2Q5T890 1561 aa5.64□□□□□ -1.51
CLTC-209ENST00000498711 ABCC10Q5T3U5 1492 aa5.64□□□□□ -1.51
CLTC-209ENST00000498711 A6NJR5 290 aa5.64□□□□□ -1.51
CLTC-209ENST00000498711 PRG4Q92954 1404 aaPredicted RBP5.64□□□□□ -1.51
CLTC-209ENST00000498711 KDM5BQ9UGL1 1544 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms