RNA–Protein interactions for RNA: ENST00000498559.5

AGAP3-225, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 2

Gene AGAP3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-225ENST00000498559 KIF3BO15066 747 aa28.3■■■□□ 2.12
AGAP3-225ENST00000498559 RNF17Q9BXT8 1623 aaKnown RBP28.29■■■□□ 2.12
AGAP3-225ENST00000498559 CAMSAP1Q5T5Y3 1602 aa28.28■■■□□ 2.12
AGAP3-225ENST00000498559 CEP170BQ9Y4F5 1589 aaPredicted RBP28.28■■■□□ 2.12
AGAP3-225ENST00000498559 APLP2Q06481 763 aa28.27■■■□□ 2.12
AGAP3-225ENST00000498559 PTPN23Q9H3S7 1636 aa28.26■■■□□ 2.11
AGAP3-225ENST00000498559 EIF2AK4Q9P2K8 1649 aaKnown RBP28.26■■■□□ 2.11
AGAP3-225ENST00000498559 CROCC2H7BZ55 1655 aa28.26■■■□□ 2.11
AGAP3-225ENST00000498559 PZPP20742 1482 aa28.24■■■□□ 2.11
AGAP3-225ENST00000498559 SHANK2Q9UPX8 1470 aa28.24■■■□□ 2.11
AGAP3-225ENST00000498559 PLA2R1Q13018 1463 aa28.21■■■□□ 2.11
AGAP3-225ENST00000498559 TCOF1Q13428 1488 aaKnown RBP28.21■■■□□ 2.11
AGAP3-225ENST00000498559 FGD6Q6ZV73 1430 aa28.21■■■□□ 2.11
AGAP3-225ENST00000498559 ABCC5O15440 1437 aa28.19■■■□□ 2.1
AGAP3-225ENST00000498559 MROH1Q8NDA8 1641 aa28.19■■■□□ 2.1
AGAP3-225ENST00000498559 A2ML1A8K2U0 1454 aa28.19■■■□□ 2.1
AGAP3-225ENST00000498559 ZC3H13Q5T200 1668 aaKnown RBP28.19■■■□□ 2.1
AGAP3-225ENST00000498559 WASHC2CQ9Y4E1 1318 aa28.18■■■□□ 2.1
AGAP3-225ENST00000498559 DUOX2Q9NRD8 1548 aa28.18■■■□□ 2.1
AGAP3-225ENST00000498559 DNMT1P26358 1616 aaKnown RBP28.18■■■□□ 2.1
AGAP3-225ENST00000498559 LTBP4Q8N2S1 1624 aa28.16■■■□□ 2.1
AGAP3-225ENST00000498559 ABCC3O15438 1527 aa28.16■■■□□ 2.1
AGAP3-225ENST00000498559 TNRQ92752 1358 aa28.14■■■□□ 2.1
AGAP3-225ENST00000498559 DAPK1P53355 1430 aa28.14■■■□□ 2.1
AGAP3-225ENST00000498559 FBXO31Q5XUX0 539 aaPredicted RBP28.13■■■□□ 2.09
AGAP3-225ENST00000498559 IQSEC2Q5JU85 1478 aa28.13■■■□□ 2.09
AGAP3-225ENST00000498559 KIF15Q9NS87 1388 aa28.11■■■□□ 2.09
AGAP3-225ENST00000498559 ERBINQ96RT1 1412 aa28.09■■■□□ 2.09
AGAP3-225ENST00000498559 PKD2Q13563 968 aa28.09■■■□□ 2.09
AGAP3-225ENST00000498559 NCKAP5LQ9HCH0 1330 aa28.09■■■□□ 2.09
AGAP3-225ENST00000498559 PRDM15P57071 1507 aaPredicted RBP28.08■■■□□ 2.09
AGAP3-225ENST00000498559 CEP152O94986 1710 aa28.07■■■□□ 2.08
AGAP3-225ENST00000498559 NLRP1Q9C000 1473 aa28.07■■■□□ 2.08
AGAP3-225ENST00000498559 SPATA31D1Q6ZQQ2 1576 aa28.07■■■□□ 2.08
AGAP3-225ENST00000498559 DEPDC5O75140 1603 aa28.05■■■□□ 2.08
AGAP3-225ENST00000498559 POLR1AO95602 1720 aaPredicted RBP28.04■■■□□ 2.08
AGAP3-225ENST00000498559 ERVK-7P63135 1459 aa28.02■■■□□ 2.08
AGAP3-225ENST00000498559 DISP3Q9P2K9 1392 aa28■■■□□ 2.07
AGAP3-225ENST00000498559 NEURL4Q96JN8 1562 aa28■■■□□ 2.07
AGAP3-225ENST00000498559 RRP7BPQ9NSQ0 103 aa28■■■□□ 2.07
AGAP3-225ENST00000498559 ADGRL2O95490 1459 aa27.99■■■□□ 2.07
AGAP3-225ENST00000498559 UGGT1Q9NYU2 1555 aa27.99■■■□□ 2.07
AGAP3-225ENST00000498559 ANKRD30AQ9BXX3 1397 aa27.99■■■□□ 2.07
AGAP3-225ENST00000498559 ARHGAP31Q2M1Z3 1444 aa27.97■■■□□ 2.07
AGAP3-225ENST00000498559 VWDEQ8N2E2 1590 aa27.94■■■□□ 2.06
AGAP3-225ENST00000498559 ZNF335Q9H4Z2 1342 aaPredicted RBP27.93■■■□□ 2.06
AGAP3-225ENST00000498559 CHIC2Q9UKJ5 165 aa27.93■■■□□ 2.06
AGAP3-225ENST00000498559 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.93■■■□□ 2.066e-8■□□□□ 11.1
AGAP3-225ENST00000498559 THEMISQ8N1K5 641 aaPredicted RBP27.92■■■□□ 2.06
AGAP3-225ENST00000498559 CFAP65Q6ZU64 1925 aaKnown RBP27.91■■■□□ 2.06
AGAP3-225ENST00000498559 LMTK2Q8IWU2 1503 aa27.91■■■□□ 2.06
AGAP3-225ENST00000498559 MED14O60244 1454 aa27.89■■■□□ 2.05
AGAP3-225ENST00000498559 ILDR2Q71H61 639 aa27.88■■■□□ 2.05
AGAP3-225ENST00000498559 UBR1Q8IWV7 1749 aa27.88■■■□□ 2.05
AGAP3-225ENST00000498559 FAM50AQ14320 339 aaKnown RBP27.87■■■□□ 2.05
AGAP3-225ENST00000498559 KANK1Q14678 1352 aa27.86■■■□□ 2.05
AGAP3-225ENST00000498559 ANKLE2Q86XL3 938 aa27.86■■■□□ 2.05
AGAP3-225ENST00000498559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.84■■■□□ 2.054e-8■■□□□ 14.3
AGAP3-225ENST00000498559 NPHP4O75161 1426 aaPredicted RBP27.82■■■□□ 2.04
AGAP3-225ENST00000498559 IQGAP1P46940 1657 aa27.81■■■□□ 2.04
AGAP3-225ENST00000498559 SOCS7O14512 581 aa27.81■■■□□ 2.04
AGAP3-225ENST00000498559 EFCAB6Q5THR3 1501 aa27.81■■■□□ 2.04
AGAP3-225ENST00000498559 ANKRD50Q9ULJ7 1429 aa27.8■■■□□ 2.04
AGAP3-225ENST00000498559 UBAP1LF5GYI3 381 aa27.78■■■□□ 2.04
AGAP3-225ENST00000498559 SLIT1O75093 1534 aa27.77■■■□□ 2.04
AGAP3-225ENST00000498559 CPS1P31327 1500 aa27.77■■■□□ 2.04
AGAP3-225ENST00000498559 ARHGAP23Q9P227 1491 aa27.77■■■□□ 2.04
AGAP3-225ENST00000498559 PIK3C2BO00750 1634 aa27.77■■■□□ 2.04
AGAP3-225ENST00000498559 KDM5AP29375 1690 aaKnown RBP27.75■■■□□ 2.03
AGAP3-225ENST00000498559 SYNMO15061 1565 aa27.75■■■□□ 2.03
AGAP3-225ENST00000498559 NOS1P29475 1434 aa27.74■■■□□ 2.03
AGAP3-225ENST00000498559 ROCK1Q13464 1354 aa27.73■■■□□ 2.03
AGAP3-225ENST00000498559 UNC13BO14795 1591 aa27.73■■■□□ 2.03
AGAP3-225ENST00000498559 SCAF11Q99590 1463 aaKnown RBP27.72■■■□□ 2.03
AGAP3-225ENST00000498559 TET3O43151 1660 aa27.7■■■□□ 2.02
AGAP3-225ENST00000498559 RPRD2Q5VT52 1461 aaKnown RBP27.7■■■□□ 2.02
AGAP3-225ENST00000498559 STRCP1A6NGW2 1772 aa27.66■■■□□ 2.02
AGAP3-225ENST00000498559 GCC2Q8IWJ2 1684 aa27.65■■■□□ 2.02
AGAP3-225ENST00000498559 TMEM2Q9UHN6 1383 aa27.65■■■□□ 2.02
AGAP3-225ENST00000498559 LTKP29376 864 aa27.65■■■□□ 2.02
AGAP3-225ENST00000498559 ADGRB3O60242 1522 aa27.64■■■□□ 2.02
AGAP3-225ENST00000498559 IDI1Q13907 227 aa27.64■■■□□ 2.02
AGAP3-225ENST00000498559 TXNDC2Q86VQ3 553 aa27.61■■■□□ 2.01
AGAP3-225ENST00000498559 PPARGC1BQ86YN6 1023 aaKnown RBP27.61■■■□□ 2.01
AGAP3-225ENST00000498559 IQGAP3Q86VI3 1631 aa27.6■■■□□ 2.01
AGAP3-225ENST00000498559 SLC52A1Q9NWF4 448 aa27.58■■■□□ 2.01
AGAP3-225ENST00000498559 E9PCH4 1651 aa27.57■■■□□ 2
AGAP3-225ENST00000498559 EID1Q9Y6B2 187 aa27.57■■■□□ 2
AGAP3-225ENST00000498559 RRBP1Q9P2E9 1410 aaKnown RBP27.57■■■□□ 2
AGAP3-225ENST00000498559 LRRC7Q96NW7 1537 aa27.57■■■□□ 2
AGAP3-225ENST00000498559 STAG3Q9UJ98 1225 aa27.56■■■□□ 2
AGAP3-225ENST00000498559 TOM1O60784 492 aa27.55■■■□□ 2
AGAP3-225ENST00000498559 ALKQ9UM73 1620 aa27.55■■■□□ 2
AGAP3-225ENST00000498559 MYO5BQ9ULV0 1848 aa27.51■■□□□ 1.99
AGAP3-225ENST00000498559 ITGAEP38570 1179 aa27.51■■□□□ 1.99
AGAP3-225ENST00000498559 TMEM131LA2VDJ0 1609 aa27.5■■□□□ 1.99
AGAP3-225ENST00000498559 HSPA1LP34931 641 aa27.5■■□□□ 1.99
AGAP3-225ENST00000498559 SCAF1Q9H7N4 1312 aaKnown RBP27.49■■□□□ 1.99
AGAP3-225ENST00000498559 MED1Q15648 1581 aaPredicted RBP27.48■■□□□ 1.99
AGAP3-225ENST00000498559 PIP4K2BP78356 416 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms