RNA–Protein interactions for RNA: ENST00000498529.5

CSNK1E-214, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-214ENST00000498529 DNMT1P26358 1616 aaKnown RBP9.51□□□□□ -0.89
CSNK1E-214ENST00000498529 FYCO1Q9BQS8 1478 aa9.51□□□□□ -0.89
CSNK1E-214ENST00000498529 DISP3Q9P2K9 1392 aa9.5□□□□□ -0.89
CSNK1E-214ENST00000498529 STRCP1A6NGW2 1772 aa9.5□□□□□ -0.89
CSNK1E-214ENST00000498529 AFAP1Q8N556 730 aa9.5□□□□□ -0.89
CSNK1E-214ENST00000498529 TIAM1Q13009 1591 aa9.5□□□□□ -0.89
CSNK1E-214ENST00000498529 GPATCH8Q9UKJ3 1502 aaKnown RBP9.49□□□□□ -0.89
CSNK1E-214ENST00000498529 MED1Q15648 1581 aaPredicted RBP9.49□□□□□ -0.89
CSNK1E-214ENST00000498529 PTPRKQ15262 1439 aa9.48□□□□□ -0.89
CSNK1E-214ENST00000498529 FAM135AQ9P2D6 1515 aa9.48□□□□□ -0.89
CSNK1E-214ENST00000498529 VWDEQ8N2E2 1590 aa9.47□□□□□ -0.89
CSNK1E-214ENST00000498529 CHRDL2Q6WN34 429 aa9.47□□□□□ -0.89
CSNK1E-214ENST00000498529 DEPDC5O75140 1603 aa9.46□□□□□ -0.89
CSNK1E-214ENST00000498529 ZC3H13Q5T200 1668 aaKnown RBP9.46□□□□□ -0.89
CSNK1E-214ENST00000498529 XIRP1Q702N8 1843 aaKnown RBP9.46□□□□□ -0.9
CSNK1E-214ENST00000498529 KIAA1107Q9UPP5 1409 aa9.46□□□□□ -0.9
CSNK1E-214ENST00000498529 A2MP01023 1474 aa9.45□□□□□ -0.9
CSNK1E-214ENST00000498529 RANGAP1P46060 587 aaPredicted RBP9.44□□□□□ -0.9
CSNK1E-214ENST00000498529 RBM42Q9BTD8 480 aaKnown RBP9.44□□□□□ -0.9
CSNK1E-214ENST00000498529 A2ML1A8K2U0 1454 aa9.44□□□□□ -0.9
CSNK1E-214ENST00000498529 MBD5Q9P267 1494 aa9.44□□□□□ -0.9
CSNK1E-214ENST00000498529 RNF17Q9BXT8 1623 aaKnown RBP9.44□□□□□ -0.9
CSNK1E-214ENST00000498529 SYNMO15061 1565 aa9.43□□□□□ -0.9
CSNK1E-214ENST00000498529 MROH1Q8NDA8 1641 aa9.42□□□□□ -0.9
CSNK1E-214ENST00000498529 CPS1P31327 1500 aa9.42□□□□□ -0.9
CSNK1E-214ENST00000498529 PLEKHH2Q8IVE3 1493 aa9.42□□□□□ -0.9
CSNK1E-214ENST00000498529 ZMYM3Q14202 1370 aa9.42□□□□□ -0.9
CSNK1E-214ENST00000498529 ZNF335Q9H4Z2 1342 aaPredicted RBP9.42□□□□□ -0.9
CSNK1E-214ENST00000498529 SAMD1Q6SPF0 538 aaPredicted RBP9.42□□□□□ -0.9
CSNK1E-214ENST00000498529 IQGAP1P46940 1657 aa9.42□□□□□ -0.9
CSNK1E-214ENST00000498529 KDM5DQ9BY66 1539 aa9.41□□□□□ -0.9
CSNK1E-214ENST00000498529 CDK11AQ9UQ88 783 aaPredicted RBP9.41□□□□□ -0.9
CSNK1E-214ENST00000498529 EHBP1L1Q8N3D4 1523 aa9.41□□□□□ -0.9
CSNK1E-214ENST00000498529 PZPP20742 1482 aa9.4□□□□□ -0.9
CSNK1E-214ENST00000498529 MED14O60244 1454 aa9.4□□□□□ -0.91
CSNK1E-214ENST00000498529 UBR1Q8IWV7 1749 aa9.39□□□□□ -0.91
CSNK1E-214ENST00000498529 ABCB7O75027 752 aa9.39□□□□□ -0.91
CSNK1E-214ENST00000498529 EIF2AK4Q9P2K8 1649 aaKnown RBP9.38□□□□□ -0.91
CSNK1E-214ENST00000498529 ARHGEF5Q12774 1597 aa9.38□□□□□ -0.91
CSNK1E-214ENST00000498529 CEP152O94986 1710 aa9.38□□□□□ -0.91
CSNK1E-214ENST00000498529 RTEL1-TNFRSF6BF6WH68 1400 aa9.38□□□□□ -0.91
CSNK1E-214ENST00000498529 MAST1Q9Y2H9 1570 aa9.37□□□□□ -0.91
CSNK1E-214ENST00000498529 NCKAP5LQ9HCH0 1330 aa9.36□□□□□ -0.91
CSNK1E-214ENST00000498529 SHANK2Q9UPX8 1470 aa9.36□□□□□ -0.91
CSNK1E-214ENST00000498529 PKD2Q13563 968 aa9.35□□□□□ -0.91
CSNK1E-214ENST00000498529 CEP162Q5TB80 1403 aa9.35□□□□□ -0.91
CSNK1E-214ENST00000498529 ZNF219Q9P2Y4 722 aaPredicted RBP9.35□□□□□ -0.91
CSNK1E-214ENST00000498529 CROCC2H7BZ55 1655 aa9.35□□□□□ -0.91
CSNK1E-214ENST00000498529 CAMSAP2Q08AD1 1489 aa9.34□□□□□ -0.91
CSNK1E-214ENST00000498529 SPAG9O60271 1321 aaKnown RBP9.34□□□□□ -0.91
CSNK1E-214ENST00000498529 APLP2Q06481 763 aa9.34□□□□□ -0.91
CSNK1E-214ENST00000498529 ATF5Q9Y2D1 282 aaPredicted RBP9.34□□□□□ -0.91
CSNK1E-214ENST00000498529 KDM5AP29375 1690 aaKnown RBP9.34□□□□□ -0.91
CSNK1E-214ENST00000498529 ABCC3O15438 1527 aa9.34□□□□□ -0.91
CSNK1E-214ENST00000498529 CCDC141Q6ZP82 1450 aa9.34□□□□□ -0.91
CSNK1E-214ENST00000498529 NLRP1Q9C000 1473 aa9.34□□□□□ -0.91
CSNK1E-214ENST00000498529 UGGT1Q9NYU2 1555 aa9.33□□□□□ -0.92
CSNK1E-214ENST00000498529 LRRC7Q96NW7 1537 aa9.32□□□□□ -0.92
CSNK1E-214ENST00000498529 CFAP65Q6ZU64 1925 aaKnown RBP9.32□□□□□ -0.92
CSNK1E-214ENST00000498529 DHX29Q7Z478 1369 aaKnown RBP9.32□□□□□ -0.92
CSNK1E-214ENST00000498529 PRDM15P57071 1507 aaPredicted RBP9.31□□□□□ -0.92
CSNK1E-214ENST00000498529 UBTFP17480 764 aaKnown RBP9.31□□□□□ -0.92
CSNK1E-214ENST00000498529 HNRNPMP52272 730 aaKnown RBP eCLIP9.31□□□□□ -0.92
CSNK1E-214ENST00000498529 TNRQ92752 1358 aa9.31□□□□□ -0.92
CSNK1E-214ENST00000498529 ERVK-7P63135 1459 aa9.3□□□□□ -0.92
CSNK1E-214ENST00000498529 ARHGAP23Q9P227 1491 aa9.3□□□□□ -0.92
CSNK1E-214ENST00000498529 UBAP1LF5GYI3 381 aa9.3□□□□□ -0.92
CSNK1E-214ENST00000498529 SLIT1O75093 1534 aa9.3□□□□□ -0.92
CSNK1E-214ENST00000498529 NCOA2Q15596 1464 aa9.29□□□□□ -0.92
CSNK1E-214ENST00000498529 CCNB3Q8WWL7 1395 aa9.29□□□□□ -0.92
CSNK1E-214ENST00000498529 ATP1B4Q9UN42 357 aaPredicted RBP9.29□□□□□ -0.92
CSNK1E-214ENST00000498529 NPHP4O75161 1426 aaPredicted RBP9.29□□□□□ -0.92
CSNK1E-214ENST00000498529 HSPA1LP34931 641 aa9.28□□□□□ -0.92
CSNK1E-214ENST00000498529 NWD1Q149M9 1564 aa9.28□□□□□ -0.92
CSNK1E-214ENST00000498529 ZNF644Q9H582 1327 aaPredicted RBP9.28□□□□□ -0.92
CSNK1E-214ENST00000498529 PIK3C2BO00750 1634 aa9.27□□□□□ -0.92
CSNK1E-214ENST00000498529 MAP3K1Q13233 1512 aa9.27□□□□□ -0.93
CSNK1E-214ENST00000498529 ESF1Q9H501 851 aaKnown RBP9.27□□□□□ -0.93
CSNK1E-214ENST00000498529 MIA2Q96PC5 1412 aa9.27□□□□□ -0.93
CSNK1E-214ENST00000498529 SETD1AO15047 1707 aaKnown RBP9.27□□□□□ -0.93
CSNK1E-214ENST00000498529 MYT1LQ9UL68 1186 aa9.26□□□□□ -0.93
CSNK1E-214ENST00000498529 MYO5BQ9ULV0 1848 aa9.26□□□□□ -0.93
CSNK1E-214ENST00000498529 MTUS2Q5JR59 1369 aa9.25□□□□□ -0.93
CSNK1E-214ENST00000498529 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.25□□□□□ -0.93
CSNK1E-214ENST00000498529 CFDP1Q9UEE9 299 aaPredicted RBP9.25□□□□□ -0.93
CSNK1E-214ENST00000498529 ROBO1Q9Y6N7 1651 aa9.24□□□□□ -0.93
CSNK1E-214ENST00000498529 FBXO31Q5XUX0 539 aaPredicted RBP9.24□□□□□ -0.93
CSNK1E-214ENST00000498529 ZNF777Q9ULD5 760 aaPredicted RBP9.24□□□□□ -0.93
CSNK1E-214ENST00000498529 TET3O43151 1660 aa9.23□□□□□ -0.93
CSNK1E-214ENST00000498529 SCAF11Q99590 1463 aaKnown RBP9.23□□□□□ -0.93
CSNK1E-214ENST00000498529 GGT6Q6P531 493 aa9.23□□□□□ -0.93
CSNK1E-214ENST00000498529 CHD2O14647 1828 aaKnown RBP9.22□□□□□ -0.93
CSNK1E-214ENST00000498529 ARHGAP31Q2M1Z3 1444 aa9.22□□□□□ -0.93
CSNK1E-214ENST00000498529 LMTK2Q8IWU2 1503 aa9.21□□□□□ -0.94
CSNK1E-214ENST00000498529 DUOX2Q9NRD8 1548 aa9.21□□□□□ -0.94
CSNK1E-214ENST00000498529 COL16A1Q07092 1604 aaPredicted RBP9.2□□□□□ -0.94
CSNK1E-214ENST00000498529 FKBP8Q14318 412 aa9.2□□□□□ -0.94
CSNK1E-214ENST00000498529 RGS17Q9UGC6 210 aaPredicted RBP9.2□□□□□ -0.94
CSNK1E-214ENST00000498529 TOM1O60784 492 aa9.19□□□□□ -0.94
CSNK1E-214ENST00000498529 LRRC9Q6ZRR7 1453 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms