RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 CLTCQ00610 1675 aaKnown RBP19.56■□□□□ 0.72
HSPG2-213ENST00000498495 LMTK3Q96Q04 1460 aa19.55■□□□□ 0.72
HSPG2-213ENST00000498495 NCOA1Q15788 1441 aa19.55■□□□□ 0.72
HSPG2-213ENST00000498495 SETD1BQ9UPS6 1966 aaKnown RBP19.55■□□□□ 0.72
HSPG2-213ENST00000498495 MROH2AA6NES4 1674 aa19.53■□□□□ 0.72
HSPG2-213ENST00000498495 UHRF1BP1Q6BDS2 1440 aa19.52■□□□□ 0.72
HSPG2-213ENST00000498495 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.52■□□□□ 0.725e-7■■□□□ 12.5
HSPG2-213ENST00000498495 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.52■□□□□ 0.72
HSPG2-213ENST00000498495 ERBINQ96RT1 1412 aa19.51■□□□□ 0.71
HSPG2-213ENST00000498495 EIF2AK4Q9P2K8 1649 aaKnown RBP19.51■□□□□ 0.71
HSPG2-213ENST00000498495 NPATQ14207 1427 aa19.51■□□□□ 0.71
HSPG2-213ENST00000498495 ADGRL2O95490 1459 aa19.49■□□□□ 0.71
HSPG2-213ENST00000498495 KDM5DQ9BY66 1539 aa19.49■□□□□ 0.71
HSPG2-213ENST00000498495 PTPRKQ15262 1439 aa19.49■□□□□ 0.71
HSPG2-213ENST00000498495 PREX1Q8TCU6 1659 aa19.49■□□□□ 0.71
HSPG2-213ENST00000498495 FAM135AQ9P2D6 1515 aa19.48■□□□□ 0.71
HSPG2-213ENST00000498495 FBXO31Q5XUX0 539 aaPredicted RBP19.48■□□□□ 0.71
HSPG2-213ENST00000498495 RNF17Q9BXT8 1623 aaKnown RBP19.47■□□□□ 0.71
HSPG2-213ENST00000498495 KANK1Q14678 1352 aa19.45■□□□□ 0.7
HSPG2-213ENST00000498495 RRBP1Q9P2E9 1410 aaKnown RBP19.45■□□□□ 0.7
HSPG2-213ENST00000498495 ANKRD50Q9ULJ7 1429 aa19.44■□□□□ 0.7
HSPG2-213ENST00000498495 ROCK1Q13464 1354 aa19.44■□□□□ 0.7
HSPG2-213ENST00000498495 PZPP20742 1482 aa19.42■□□□□ 0.7
HSPG2-213ENST00000498495 ABCC3O15438 1527 aa19.41■□□□□ 0.7
HSPG2-213ENST00000498495 TNRQ92752 1358 aa19.41■□□□□ 0.7
HSPG2-213ENST00000498495 MROH1Q8NDA8 1641 aa19.4■□□□□ 0.7
HSPG2-213ENST00000498495 ZC3H13Q5T200 1668 aaKnown RBP19.39■□□□□ 0.69
HSPG2-213ENST00000498495 DMRT2Q9Y5R5 561 aa19.38■□□□□ 0.69
HSPG2-213ENST00000498495 PRDM15P57071 1507 aaPredicted RBP19.37■□□□□ 0.69
HSPG2-213ENST00000498495 CEP152O94986 1710 aa19.36■□□□□ 0.69
HSPG2-213ENST00000498495 DEPDC5O75140 1603 aa19.36■□□□□ 0.69
HSPG2-213ENST00000498495 ARHGAP31Q2M1Z3 1444 aa19.34■□□□□ 0.69
HSPG2-213ENST00000498495 CAMSAP1Q5T5Y3 1602 aa19.33■□□□□ 0.69
HSPG2-213ENST00000498495 MYO3AQ8NEV4 1616 aa19.33■□□□□ 0.69
HSPG2-213ENST00000498495 A2ML1A8K2U0 1454 aa19.33■□□□□ 0.68
HSPG2-213ENST00000498495 THEMISQ8N1K5 641 aaPredicted RBP19.32■□□□□ 0.68
HSPG2-213ENST00000498495 CEP170BQ9Y4F5 1589 aaPredicted RBP19.32■□□□□ 0.68
HSPG2-213ENST00000498495 CFAP65Q6ZU64 1925 aaKnown RBP19.31■□□□□ 0.68
HSPG2-213ENST00000498495 NCKAP5LQ9HCH0 1330 aa19.3■□□□□ 0.68
HSPG2-213ENST00000498495 ERVK-7P63135 1459 aa19.3■□□□□ 0.68
HSPG2-213ENST00000498495 NLRP1Q9C000 1473 aa19.3■□□□□ 0.68
HSPG2-213ENST00000498495 VWDEQ8N2E2 1590 aa19.3■□□□□ 0.68
HSPG2-213ENST00000498495 LMTK2Q8IWU2 1503 aa19.3■□□□□ 0.68
HSPG2-213ENST00000498495 SPATA31D1Q6ZQQ2 1576 aa19.29■□□□□ 0.68
HSPG2-213ENST00000498495 PKD2Q13563 968 aa19.29■□□□□ 0.68
HSPG2-213ENST00000498495 NUP155O75694 1391 aa19.29■□□□□ 0.68
HSPG2-213ENST00000498495 STRCQ7RTU9 1775 aa19.28■□□□□ 0.68
HSPG2-213ENST00000498495 ZNF142P52746 1687 aaPredicted RBP19.27■□□□□ 0.68
HSPG2-213ENST00000498495 PLA2R1Q13018 1463 aa19.25■□□□□ 0.67
HSPG2-213ENST00000498495 ANKLE2Q86XL3 938 aa19.25■□□□□ 0.67
HSPG2-213ENST00000498495 STAG3Q9UJ98 1225 aa19.25■□□□□ 0.67
HSPG2-213ENST00000498495 NAIPQ13075 1403 aa19.25■□□□□ 0.67
HSPG2-213ENST00000498495 UGGT1Q9NYU2 1555 aa19.24■□□□□ 0.67
HSPG2-213ENST00000498495 PTPRTO14522 1441 aa19.24■□□□□ 0.67
HSPG2-213ENST00000498495 UNC13BO14795 1591 aa19.23■□□□□ 0.67
HSPG2-213ENST00000498495 IDI1Q13907 227 aa19.23■□□□□ 0.67
HSPG2-213ENST00000498495 SLC52A1Q9NWF4 448 aa19.22■□□□□ 0.67
HSPG2-213ENST00000498495 EFCAB6Q5THR3 1501 aa19.21■□□□□ 0.67
HSPG2-213ENST00000498495 TRIM52Q96A61 297 aa19.21■□□□□ 0.67
HSPG2-213ENST00000498495 RPRD2Q5VT52 1461 aaKnown RBP19.21■□□□□ 0.67
HSPG2-213ENST00000498495 HFM1A2PYH4 1435 aa19.2■□□□□ 0.66
HSPG2-213ENST00000498495 NOS1P29475 1434 aa19.19■□□□□ 0.66
HSPG2-213ENST00000498495 TET3O43151 1660 aa19.19■□□□□ 0.66
HSPG2-213ENST00000498495 IQGAP3Q86VI3 1631 aa19.17■□□□□ 0.66
HSPG2-213ENST00000498495 GCC2Q8IWJ2 1684 aa19.15■□□□□ 0.66
HSPG2-213ENST00000498495 TXNDC2Q86VQ3 553 aa19.15■□□□□ 0.66
HSPG2-213ENST00000498495 EID1Q9Y6B2 187 aa19.15■□□□□ 0.66
HSPG2-213ENST00000498495 CERKQ8TCT0 537 aa19.14■□□□□ 0.65
HSPG2-213ENST00000498495 CHGAP10645 457 aaKnown RBP19.13■□□□□ 0.65
HSPG2-213ENST00000498495 SYNMO15061 1565 aa19.13■□□□□ 0.65
HSPG2-213ENST00000498495 UBR1Q8IWV7 1749 aa19.12■□□□□ 0.65
HSPG2-213ENST00000498495 E9PCH4 1651 aa19.12■□□□□ 0.65
HSPG2-213ENST00000498495 PIK3C2BO00750 1634 aa19.12■□□□□ 0.65
HSPG2-213ENST00000498495 LTKP29376 864 aa19.11■□□□□ 0.65
HSPG2-213ENST00000498495 SLC4A1APQ9BWU0 796 aaKnown RBP19.11■□□□□ 0.65
HSPG2-213ENST00000498495 NPHP4O75161 1426 aaPredicted RBP19.09■□□□□ 0.65
HSPG2-213ENST00000498495 TMEM2Q9UHN6 1383 aa19.09■□□□□ 0.65
HSPG2-213ENST00000498495 HDGFP51858 240 aaKnown RBP19.09■□□□□ 0.65
HSPG2-213ENST00000498495 ILDR1Q86SU0 546 aaPredicted RBP19.09■□□□□ 0.65
HSPG2-213ENST00000498495 ZNF335Q9H4Z2 1342 aaPredicted RBP19.08■□□□□ 0.65
HSPG2-213ENST00000498495 ACIN1Q9UKV3 1341 aaKnown RBP19.08■□□□□ 0.65
HSPG2-213ENST00000498495 MED14O60244 1454 aa19.08■□□□□ 0.64
HSPG2-213ENST00000498495 POLR1AO95602 1720 aaPredicted RBP19.08■□□□□ 0.64
HSPG2-213ENST00000498495 SLIT1O75093 1534 aa19.07■□□□□ 0.64
HSPG2-213ENST00000498495 ARHGAP23Q9P227 1491 aa19.07■□□□□ 0.64
HSPG2-213ENST00000498495 SETD5Q9C0A6 1442 aa19.07■□□□□ 0.64
HSPG2-213ENST00000498495 NEURL4Q96JN8 1562 aa19.06■□□□□ 0.64
HSPG2-213ENST00000498495 SCAF11Q99590 1463 aaKnown RBP19.06■□□□□ 0.64
HSPG2-213ENST00000498495 FBXO41Q8TF61 875 aa19.06■□□□□ 0.64
HSPG2-213ENST00000498495 KDM5AP29375 1690 aaKnown RBP19.05■□□□□ 0.64
HSPG2-213ENST00000498495 BCANQ96GW7 911 aa19.04■□□□□ 0.64
HSPG2-213ENST00000498495 ADGRB3O60242 1522 aa19.04■□□□□ 0.64
HSPG2-213ENST00000498495 MPHOSPH9Q99550 1183 aa19.03■□□□□ 0.64
HSPG2-213ENST00000498495 LTBP4Q8N2S1 1624 aa19.02■□□□□ 0.64
HSPG2-213ENST00000498495 PPP1R15AO75807 674 aaPredicted RBP19.01■□□□□ 0.63
HSPG2-213ENST00000498495 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.01■□□□□ 0.63
HSPG2-213ENST00000498495 IQGAP1P46940 1657 aa19■□□□□ 0.63
HSPG2-213ENST00000498495 RAB3GAP2Q9H2M9 1393 aa18.99■□□□□ 0.63
HSPG2-213ENST00000498495 FOXD1Q16676 465 aa18.99■□□□□ 0.63
HSPG2-213ENST00000498495 ZNF326Q5BKZ1 582 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms