RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 OCEL1Q9H607 264 aa14.39□□□□□ -0.11
SNX13-212ENST00000498463 CDHR5Q9HBB8 845 aa14.39□□□□□ -0.11
SNX13-212ENST00000498463 RAD21O60216 631 aa14.38□□□□□ -0.11
SNX13-212ENST00000498463 PHOX2BQ99453 314 aa14.38□□□□□ -0.11
SNX13-212ENST00000498463 SERPINA10Q9UK55 444 aa14.38□□□□□ -0.11
SNX13-212ENST00000498463 SSTR3P32745 418 aaPredicted RBP14.36□□□□□ -0.11
SNX13-212ENST00000498463 TMEM92Q6UXU6 159 aa14.36□□□□□ -0.11
SNX13-212ENST00000498463 PROCA1Q8NCQ7 364 aaPredicted RBP14.36□□□□□ -0.11
SNX13-212ENST00000498463 TRAIPQ9BWF2 469 aa14.36□□□□□ -0.11
SNX13-212ENST00000498463 NPDC1Q9NQX5 325 aaPredicted RBP14.36□□□□□ -0.11
SNX13-212ENST00000498463 GALR2O43603 387 aaPredicted RBP14.35□□□□□ -0.11
SNX13-212ENST00000498463 BEGAINQ9BUH8 593 aa14.35□□□□□ -0.11
SNX13-212ENST00000498463 EN1Q05925 392 aaPredicted RBP14.33□□□□□ -0.12
SNX13-212ENST00000498463 ATP1B4Q9UN42 357 aaPredicted RBP14.33□□□□□ -0.12
SNX13-212ENST00000498463 POLR3EQ9NVU0 708 aa14.32□□□□□ -0.12
SNX13-212ENST00000498463 SPDYE5A6NIY4 337 aa14.31□□□□□ -0.12
SNX13-212ENST00000498463 ATN1P54259 1190 aaPredicted RBP14.31□□□□□ -0.12
SNX13-212ENST00000498463 IER5LQ5T953 404 aa14.3□□□□□ -0.12
SNX13-212ENST00000498463 FAM217BQ9NTX9 383 aaPredicted RBP14.3□□□□□ -0.12
SNX13-212ENST00000498463 COG6Q9Y2V7 657 aa14.3□□□□□ -0.12
SNX13-212ENST00000498463 MAP3K7O43318 606 aa14.29□□□□□ -0.12
SNX13-212ENST00000498463 KCTD17Q8N5Z5 321 aa14.29□□□□□ -0.12
SNX13-212ENST00000498463 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.29□□□□□ -0.12
SNX13-212ENST00000498463 PLSCR2Q9NRY7 297 aa14.28□□□□□ -0.12
SNX13-212ENST00000498463 MYSM1Q5VVJ2 828 aa14.27□□□□□ -0.13
SNX13-212ENST00000498463 ANO8Q9HCE9 1232 aaPredicted RBP14.27□□□□□ -0.13
SNX13-212ENST00000498463 PTCD2Q8WV60 388 aaKnown RBP14.26□□□□□ -0.13
SNX13-212ENST00000498463 EPAS1Q99814 870 aa14.26□□□□□ -0.13
SNX13-212ENST00000498463 PHF14O94880 888 aa14.25□□□□□ -0.13
SNX13-212ENST00000498463 L3MBTL3Q96JM7 780 aaPredicted RBP14.25□□□□□ -0.13
SNX13-212ENST00000498463 PLCG2P16885 1265 aa14.24□□□□□ -0.13
SNX13-212ENST00000498463 CLK2P49760 499 aaKnown RBP14.23□□□□□ -0.13
SNX13-212ENST00000498463 METTL3Q86U44 580 aaKnown RBP14.23□□□□□ -0.13
SNX13-212ENST00000498463 RBM33Q96EV2 1170 aaKnown RBP14.23□□□□□ -0.13
SNX13-212ENST00000498463 TSR1Q2NL82 804 aaKnown RBP14.22□□□□□ -0.13
SNX13-212ENST00000498463 BANK1Q8NDB2 785 aa14.22□□□□□ -0.13
SNX13-212ENST00000498463 NLRP7Q8WX94 980 aa14.22□□□□□ -0.13
SNX13-212ENST00000498463 RETREG2Q8NC44 543 aa14.21□□□□□ -0.13
SNX13-212ENST00000498463 SNRKQ9NRH2 765 aa14.21□□□□□ -0.13
SNX13-212ENST00000498463 ATMINO43313 823 aaPredicted RBP14.2□□□□□ -0.14
SNX13-212ENST00000498463 RFC5P40937 340 aa14.2□□□□□ -0.14
SNX13-212ENST00000498463 FAM161AQ3B820 660 aa14.2□□□□□ -0.14
SNX13-212ENST00000498463 AEBP1Q8IUX7 1158 aa14.2□□□□□ -0.14
SNX13-212ENST00000498463 ZNF330Q9Y3S2 320 aaPredicted RBP14.2□□□□□ -0.14
SNX13-212ENST00000498463 OATP04181 439 aa14.18□□□□□ -0.14
SNX13-212ENST00000498463 ASTLQ6HA08 431 aaPredicted RBP14.18□□□□□ -0.14
SNX13-212ENST00000498463 SLAIN1Q8ND83 568 aa14.17□□□□□ -0.14
SNX13-212ENST00000498463 PCDHGA10Q9Y5H3 936 aa14.17□□□□□ -0.14
SNX13-212ENST00000498463 TBC1D2Q9BYX2 928 aa14.16□□□□□ -0.14
SNX13-212ENST00000498463 SLC34A2O95436 690 aa14.14□□□□□ -0.15
SNX13-212ENST00000498463 FBXO31Q5XUX0 539 aaPredicted RBP14.14□□□□□ -0.15
SNX13-212ENST00000498463 TYW1BQ6NUM6 668 aa14.14□□□□□ -0.15
SNX13-212ENST00000498463 PXYLP1Q8TE99 480 aa14.14□□□□□ -0.15
SNX13-212ENST00000498463 ADGRG1Q9Y653 693 aa14.14□□□□□ -0.15
SNX13-212ENST00000498463 TMEM259Q4ZIN3 620 aa14.13□□□□□ -0.15
SNX13-212ENST00000498463 PADI6Q6TGC4 694 aa14.12□□□□□ -0.15
SNX13-212ENST00000498463 DIXDC1Q155Q3 683 aa14.11□□□□□ -0.15
SNX13-212ENST00000498463 MTMR14Q8NCE2 650 aa14.11□□□□□ -0.15
SNX13-212ENST00000498463 CLCN6P51797 869 aa14.1□□□□□ -0.15
SNX13-212ENST00000498463 PPP2R2DQ66LE6 453 aa14.1□□□□□ -0.15
SNX13-212ENST00000498463 LIMD1Q9UGP4 676 aa14.1□□□□□ -0.15
SNX13-212ENST00000498463 IRF5Q13568 498 aa14.09□□□□□ -0.15
SNX13-212ENST00000498463 FBXW7Q969H0 707 aa14.09□□□□□ -0.15
SNX13-212ENST00000498463 GDPD2Q9HCC8 539 aa14.09□□□□□ -0.15
SNX13-212ENST00000498463 PPP1R15AO75807 674 aaPredicted RBP14.07□□□□□ -0.16
SNX13-212ENST00000498463 CERKQ8TCT0 537 aa14.06□□□□□ -0.16
SNX13-212ENST00000498463 TMCO4Q5TGY1 634 aa14.05□□□□□ -0.16
SNX13-212ENST00000498463 WWC1Q8IX03 1113 aa14.05□□□□□ -0.16
SNX13-212ENST00000498463 JPH4Q96JJ6 628 aa14.04□□□□□ -0.16
SNX13-212ENST00000498463 CALR3Q96L12 384 aaKnown RBP14.04□□□□□ -0.16
SNX13-212ENST00000498463 RIC3Q7Z5B4 369 aa14.03□□□□□ -0.16
SNX13-212ENST00000498463 TTC13Q8NBP0 860 aa14.03□□□□□ -0.16
SNX13-212ENST00000498463 RGS22Q8NE09 1264 aa14.03□□□□□ -0.16
SNX13-212ENST00000498463 RBM27Q9P2N5 1060 aaKnown RBP14.03□□□□□ -0.16
SNX13-212ENST00000498463 COLQQ9Y215 455 aaPredicted RBP14.03□□□□□ -0.16
SNX13-212ENST00000498463 SEC24BO95487 1268 aa14.02□□□□□ -0.17
SNX13-212ENST00000498463 GZF1Q9H116 711 aaPredicted RBP14.02□□□□□ -0.17
SNX13-212ENST00000498463 SOCS7O14512 581 aa14.01□□□□□ -0.17
SNX13-212ENST00000498463 ABL2P42684 1182 aa14.01□□□□□ -0.17
SNX13-212ENST00000498463 SPIRE2Q8WWL2 714 aa14.01□□□□□ -0.17
SNX13-212ENST00000498463 GLMNQ92990 594 aa14.01□□□□□ -0.17
SNX13-212ENST00000498463 POM121CA8CG34 1229 aa13.99□□□□□ -0.17
SNX13-212ENST00000498463 TUSC1Q2TAM9 212 aa13.99□□□□□ -0.17
SNX13-212ENST00000498463 C6orf132Q5T0Z8 1188 aa13.99□□□□□ -0.17
SNX13-212ENST00000498463 C3orf67Q6ZVT6 689 aa13.98□□□□□ -0.17
SNX13-212ENST00000498463 PCDHGA4Q9Y5G9 962 aa13.98□□□□□ -0.17
SNX13-212ENST00000498463 SPTLC1O15269 473 aa13.97□□□□□ -0.17
SNX13-212ENST00000498463 MFAP1P55081 439 aaKnown RBP13.97□□□□□ -0.17
SNX13-212ENST00000498463 RBM46Q8TBY0 533 aaKnown RBP13.97□□□□□ -0.17
SNX13-212ENST00000498463 TBC1D2BQ9UPU7 963 aa13.97□□□□□ -0.17
SNX13-212ENST00000498463 MTMR7Q9Y216 660 aa13.97□□□□□ -0.17
SNX13-212ENST00000498463 FOSBP53539 338 aa13.96□□□□□ -0.17
SNX13-212ENST00000498463 PRM3Q9NNZ6 103 aa13.96□□□□□ -0.17
SNX13-212ENST00000498463 ACIN1Q9UKV3 1341 aaKnown RBP13.95□□□□□ -0.18
SNX13-212ENST00000498463 PDE4CQ08493 712 aa13.95□□□□□ -0.18
SNX13-212ENST00000498463 RSBN1LQ6PCB5 846 aaPredicted RBP13.95□□□□□ -0.18
SNX13-212ENST00000498463 KDM4FA0A1W2PPD8 638 aa13.94□□□□□ -0.18
SNX13-212ENST00000498463 CD46P15529 392 aa13.93□□□□□ -0.18
SNX13-212ENST00000498463 CSPP1Q1MSJ5 1256 aa13.93□□□□□ -0.18
SNX13-212ENST00000498463 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms