RNA–Protein interactions for RNA: ENST00000498450.1

TFAP2A-219, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 5

Gene TFAP2A, Length 417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-219ENST00000498450 FAM135BQ49AJ0 1406 aa15.29■□□□□ 0.04
TFAP2A-219ENST00000498450 TROQ12816 1431 aaPredicted RBP15.28■□□□□ 0.04
TFAP2A-219ENST00000498450 CLIP1P30622 1438 aa15.27■□□□□ 0.04
TFAP2A-219ENST00000498450 PLXNC1O60486 1568 aa15.27■□□□□ 0.03
TFAP2A-219ENST00000498450 NPHP4O75161 1426 aaPredicted RBP15.26■□□□□ 0.03
TFAP2A-219ENST00000498450 ITSN2Q9NZM3 1697 aa15.26■□□□□ 0.03
TFAP2A-219ENST00000498450 THEMISQ8N1K5 641 aaPredicted RBP15.26■□□□□ 0.03
TFAP2A-219ENST00000498450 SETD1AO15047 1707 aaKnown RBP15.24■□□□□ 0.03
TFAP2A-219ENST00000498450 CDC42BPBQ9Y5S2 1711 aa15.24■□□□□ 0.03
TFAP2A-219ENST00000498450 PREX2Q70Z35 1606 aa15.22■□□□□ 0.03
TFAP2A-219ENST00000498450 SAMD9LQ8IVG5 1584 aa15.22■□□□□ 0.03
TFAP2A-219ENST00000498450 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.22■□□□□ 0.03
TFAP2A-219ENST00000498450 FAM135AQ9P2D6 1515 aa15.22■□□□□ 0.03
TFAP2A-219ENST00000498450 NLRP1Q9C000 1473 aa15.21■□□□□ 0.03
TFAP2A-219ENST00000498450 TNRQ92752 1358 aa15.21■□□□□ 0.02
TFAP2A-219ENST00000498450 FMN1Q68DA7 1419 aa15.2■□□□□ 0.02
TFAP2A-219ENST00000498450 IQGAP1P46940 1657 aa15.2■□□□□ 0.02
TFAP2A-219ENST00000498450 A2MP01023 1474 aa15.2■□□□□ 0.02
TFAP2A-219ENST00000498450 SPAG9O60271 1321 aaKnown RBP15.18■□□□□ 0.02
TFAP2A-219ENST00000498450 STRCP1A6NGW2 1772 aa15.18■□□□□ 0.02
TFAP2A-219ENST00000498450 KDM5DQ9BY66 1539 aa15.17■□□□□ 0.02
TFAP2A-219ENST00000498450 PZPP20742 1482 aa15.17■□□□□ 0.02
TFAP2A-219ENST00000498450 CDK12Q9NYV4 1490 aaPredicted RBP15.16■□□□□ 0.02
TFAP2A-219ENST00000498450 GGT6Q6P531 493 aa15.16■□□□□ 0.02
TFAP2A-219ENST00000498450 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.16■□□□□ 0.02
TFAP2A-219ENST00000498450 ATP7AQ04656 1500 aa15.16■□□□□ 0.02
TFAP2A-219ENST00000498450 UGGT1Q9NYU2 1555 aa15.15■□□□□ 0.02
TFAP2A-219ENST00000498450 ZNF772Q68DY9 489 aaPredicted RBP15.15■□□□□ 0.02
TFAP2A-219ENST00000498450 KIAA1107Q9UPP5 1409 aa15.14■□□□□ 0.01
TFAP2A-219ENST00000498450 MIA2Q96PC5 1412 aa15.13■□□□□ 0.01
TFAP2A-219ENST00000498450 INO80Q9ULG1 1556 aaPredicted RBP15.13■□□□□ 0.01
TFAP2A-219ENST00000498450 JCADQ9P266 1359 aa15.12■□□□□ 0.01
TFAP2A-219ENST00000498450 LRRC9Q6ZRR7 1453 aa15.12■□□□□ 0.01
TFAP2A-219ENST00000498450 PLEKHH2Q8IVE3 1493 aa15.11■□□□□ 0.01
TFAP2A-219ENST00000498450 ADGBQ8N7X0 1667 aa15.09■□□□□ 0.01
TFAP2A-219ENST00000498450 ZC3H13Q5T200 1668 aaKnown RBP15.09■□□□□ 0.01
TFAP2A-219ENST00000498450 FBXO31Q5XUX0 539 aaPredicted RBP15.08■□□□□ 0
TFAP2A-219ENST00000498450 SPATA31A6Q5VVP1 1343 aa15.08■□□□□ 0
TFAP2A-219ENST00000498450 RANGAP1P46060 587 aaPredicted RBP15.07■□□□□ 0
TFAP2A-219ENST00000498450 EEA1Q15075 1411 aa15.07■□□□□ 0
TFAP2A-219ENST00000498450 SYCP2Q9BX26 1530 aa15.07■□□□□ 0
TFAP2A-219ENST00000498450 ROBO1Q9Y6N7 1651 aa15.06■□□□□ 0
TFAP2A-219ENST00000498450 XIRP1Q702N8 1843 aaKnown RBP15.06■□□□□ 0
TFAP2A-219ENST00000498450 CDC42BPAQ5VT25 1732 aa15.06■□□□□ 0
TFAP2A-219ENST00000498450 RXRBP28702 533 aa15.05■□□□□ -0
TFAP2A-219ENST00000498450 FGD6Q6ZV73 1430 aa15.05■□□□□ -0
TFAP2A-219ENST00000498450 RTEL1-TNFRSF6BF6WH68 1400 aa15.03■□□□□ -0
TFAP2A-219ENST00000498450 ATP1B4Q9UN42 357 aaPredicted RBP15.03■□□□□ -0
TFAP2A-219ENST00000498450 DHX29Q7Z478 1369 aaKnown RBP15.02■□□□□ -0
TFAP2A-219ENST00000498450 TRIM52Q96A61 297 aa15.02■□□□□ -0
TFAP2A-219ENST00000498450 CCDC18Q5T9S5 1454 aa15.01□□□□□ -0.01
TFAP2A-219ENST00000498450 SCAF11Q99590 1463 aaKnown RBP15.01□□□□□ -0.01
TFAP2A-219ENST00000498450 U3KPZ7 1027 aaPredicted RBP15.01□□□□□ -0.01
TFAP2A-219ENST00000498450 MYCNP04198 464 aaPredicted RBP15□□□□□ -0.01
TFAP2A-219ENST00000498450 WASHC2CQ9Y4E1 1318 aa14.99□□□□□ -0.01
TFAP2A-219ENST00000498450 GPATCH8Q9UKJ3 1502 aaKnown RBP14.99□□□□□ -0.01
TFAP2A-219ENST00000498450 HNRNPMP52272 730 aaKnown RBP eCLIP14.99□□□□□ -0.01
TFAP2A-219ENST00000498450 ZRANB1Q9UGI0 708 aa14.99□□□□□ -0.01
TFAP2A-219ENST00000498450 TMEM94Q12767 1356 aa14.98□□□□□ -0.01
TFAP2A-219ENST00000498450 ABCC3O15438 1527 aa14.97□□□□□ -0.01
TFAP2A-219ENST00000498450 SLIT1O75093 1534 aa14.97□□□□□ -0.01
TFAP2A-219ENST00000498450 ARHGAP23Q9P227 1491 aa14.97□□□□□ -0.01
TFAP2A-219ENST00000498450 PHLPP1O60346 1717 aa14.97□□□□□ -0.01
TFAP2A-219ENST00000498450 MAP3K1Q13233 1512 aa14.97□□□□□ -0.01
TFAP2A-219ENST00000498450 LRP6O75581 1613 aa14.96□□□□□ -0.01
TFAP2A-219ENST00000498450 ZNF777Q9ULD5 760 aaPredicted RBP14.96□□□□□ -0.01
TFAP2A-219ENST00000498450 MEX3CQ5U5Q3 659 aaKnown RBP14.95□□□□□ -0.02
TFAP2A-219ENST00000498450 COL16A1Q07092 1604 aaPredicted RBP14.95□□□□□ -0.02
TFAP2A-219ENST00000498450 ARHGAP35Q9NRY4 1499 aa14.95□□□□□ -0.02
TFAP2A-219ENST00000498450 LRRIQ1Q96JM4 1722 aa14.95□□□□□ -0.02
TFAP2A-219ENST00000498450 KCNA6P17658 529 aa14.94□□□□□ -0.02
TFAP2A-219ENST00000498450 SLAIN2Q9P270 581 aa14.93□□□□□ -0.02
TFAP2A-219ENST00000498450 NKTRP30414 1462 aaKnown RBP14.93□□□□□ -0.02
TFAP2A-219ENST00000498450 PRDM15P57071 1507 aaPredicted RBP14.92□□□□□ -0.02
TFAP2A-219ENST00000498450 KIF3BO15066 747 aa14.92□□□□□ -0.02
TFAP2A-219ENST00000498450 CFDP1Q9UEE9 299 aaPredicted RBP14.92□□□□□ -0.02
TFAP2A-219ENST00000498450 MSH6P52701 1360 aa14.91□□□□□ -0.02
TFAP2A-219ENST00000498450 UBR1Q8IWV7 1749 aa14.91□□□□□ -0.02
TFAP2A-219ENST00000498450 CASKIN1Q8WXD9 1431 aa14.91□□□□□ -0.02
TFAP2A-219ENST00000498450 SHPRHQ149N8 1683 aa14.9□□□□□ -0.02
TFAP2A-219ENST00000498450 LTKP29376 864 aa14.9□□□□□ -0.02
TFAP2A-219ENST00000498450 TXNDC2Q86VQ3 553 aa14.9□□□□□ -0.02
TFAP2A-219ENST00000498450 EID1Q9Y6B2 187 aa14.9□□□□□ -0.02
TFAP2A-219ENST00000498450 TIAM1Q13009 1591 aa14.9□□□□□ -0.02
TFAP2A-219ENST00000498450 CAMSAP2Q08AD1 1489 aa14.89□□□□□ -0.03
TFAP2A-219ENST00000498450 ATAD2Q6PL18 1390 aa14.89□□□□□ -0.03
TFAP2A-219ENST00000498450 ERVK-7P63135 1459 aa14.89□□□□□ -0.03
TFAP2A-219ENST00000498450 NCOA2Q15596 1464 aa14.89□□□□□ -0.03
TFAP2A-219ENST00000498450 MBD5Q9P267 1494 aa14.89□□□□□ -0.03
TFAP2A-219ENST00000498450 RBM6P78332 1123 aaKnown RBP14.88□□□□□ -0.03
TFAP2A-219ENST00000498450 CCDC125Q86Z20 511 aa14.88□□□□□ -0.03
TFAP2A-219ENST00000498450 RGS12O14924 1447 aa14.88□□□□□ -0.03
TFAP2A-219ENST00000498450 SETBP1Q9Y6X0 1596 aa14.86□□□□□ -0.03
TFAP2A-219ENST00000498450 NCOA3Q9Y6Q9 1424 aa14.86□□□□□ -0.03
TFAP2A-219ENST00000498450 AHDC1Q5TGY3 1603 aaPredicted RBP14.86□□□□□ -0.03
TFAP2A-219ENST00000498450 PROSER2Q86WR7 435 aaPredicted RBP14.86□□□□□ -0.03
TFAP2A-219ENST00000498450 NWD1Q149M9 1564 aa14.85□□□□□ -0.03
TFAP2A-219ENST00000498450 RSPH4AQ5TD94 716 aa14.85□□□□□ -0.03
TFAP2A-219ENST00000498450 RNF39Q9H2S5 420 aa14.85□□□□□ -0.03
TFAP2A-219ENST00000498450 CCNB3Q8WWL7 1395 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms