RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 CAMSAP2Q08AD1 1489 aa25.85■■□□□ 1.73
MUC1-220ENST00000498431 NCOA2Q15596 1464 aa25.85■■□□□ 1.73
MUC1-220ENST00000498431 CCDC141Q6ZP82 1450 aa25.85■■□□□ 1.73
MUC1-220ENST00000498431 KIF3BO15066 747 aa25.85■■□□□ 1.73
MUC1-220ENST00000498431 TNRQ92752 1358 aa25.82■■□□□ 1.72
MUC1-220ENST00000498431 KDM5DQ9BY66 1539 aa25.82■■□□□ 1.72
MUC1-220ENST00000498431 NEURL4Q96JN8 1562 aa25.82■■□□□ 1.72
MUC1-220ENST00000498431 PZPP20742 1482 aa25.81■■□□□ 1.72
MUC1-220ENST00000498431 POLR1AO95602 1720 aaPredicted RBP25.8■■□□□ 1.72
MUC1-220ENST00000498431 FAM135AQ9P2D6 1515 aa25.77■■□□□ 1.72
MUC1-220ENST00000498431 WASHC2CQ9Y4E1 1318 aa25.75■■□□□ 1.71
MUC1-220ENST00000498431 ARHGEF5Q12774 1597 aa25.74■■□□□ 1.71
MUC1-220ENST00000498431 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.72■■□□□ 1.71
MUC1-220ENST00000498431 RSPH4AQ5TD94 716 aa25.72■■□□□ 1.71
MUC1-220ENST00000498431 MIA2Q96PC5 1412 aa25.71■■□□□ 1.71
MUC1-220ENST00000498431 SHANK2Q9UPX8 1470 aa25.7■■□□□ 1.7
MUC1-220ENST00000498431 CPS1P31327 1500 aa25.68■■□□□ 1.7
MUC1-220ENST00000498431 UGGT1Q9NYU2 1555 aa25.68■■□□□ 1.7
MUC1-220ENST00000498431 NLRP1Q9C000 1473 aa25.67■■□□□ 1.7
MUC1-220ENST00000498431 VWDEQ8N2E2 1590 aa25.67■■□□□ 1.7
MUC1-220ENST00000498431 RNF17Q9BXT8 1623 aaKnown RBP25.66■■□□□ 1.7
MUC1-220ENST00000498431 TSPY4P0CV99 314 aa25.66■■□□□ 1.7
MUC1-220ENST00000498431 TSPY10P0CW01 314 aa25.66■■□□□ 1.7
MUC1-220ENST00000498431 ANKLE2Q86XL3 938 aa25.66■■□□□ 1.7
MUC1-220ENST00000498431 SCAF1Q9H7N4 1312 aaKnown RBP25.65■■□□□ 1.7
MUC1-220ENST00000498431 PIP4K2BP78356 416 aa25.65■■□□□ 1.7
MUC1-220ENST00000498431 LRRC9Q6ZRR7 1453 aa25.65■■□□□ 1.7
MUC1-220ENST00000498431 HSPA1LP34931 641 aa25.64■■□□□ 1.7
MUC1-220ENST00000498431 THEMISQ8N1K5 641 aaPredicted RBP25.64■■□□□ 1.7
MUC1-220ENST00000498431 ABCC3O15438 1527 aa25.63■■□□□ 1.69
MUC1-220ENST00000498431 DEPDC5O75140 1603 aa25.63■■□□□ 1.69
MUC1-220ENST00000498431 MED14O60244 1454 aa25.63■■□□□ 1.69
MUC1-220ENST00000498431 MAST1Q9Y2H9 1570 aa25.63■■□□□ 1.69
MUC1-220ENST00000498431 NPHP4O75161 1426 aaPredicted RBP25.63■■□□□ 1.69
MUC1-220ENST00000498431 VPS8Q8N3P4 1428 aa25.61■■□□□ 1.69
MUC1-220ENST00000498431 MROH1Q8NDA8 1641 aa25.6■■□□□ 1.69
MUC1-220ENST00000498431 IQGAP1P46940 1657 aa25.59■■□□□ 1.69
MUC1-220ENST00000498431 ZC3H13Q5T200 1668 aaKnown RBP25.59■■□□□ 1.69
MUC1-220ENST00000498431 TOM1O60784 492 aa25.59■■□□□ 1.69
MUC1-220ENST00000498431 ALKQ9UM73 1620 aa25.59■■□□□ 1.69
MUC1-220ENST00000498431 KANK4Q5T7N3 995 aaPredicted RBP25.58■■□□□ 1.69
MUC1-220ENST00000498431 EIF2AK4Q9P2K8 1649 aaKnown RBP25.58■■□□□ 1.69
MUC1-220ENST00000498431 MED1Q15648 1581 aaPredicted RBP25.57■■□□□ 1.68
MUC1-220ENST00000498431 ERVK-7P63135 1459 aa25.57■■□□□ 1.68
MUC1-220ENST00000498431 STRCP1A6NGW2 1772 aa25.56■■□□□ 1.68
MUC1-220ENST00000498431 CEP152O94986 1710 aa25.56■■□□□ 1.68
MUC1-220ENST00000498431 LOC105371045A0A1W2PR82 267 aa25.55■■□□□ 1.68
MUC1-220ENST00000498431 CFAP65Q6ZU64 1925 aaKnown RBP25.53■■□□□ 1.68
MUC1-220ENST00000498431 MYOM3Q5VTT5 1437 aa25.52■■□□□ 1.68
MUC1-220ENST00000498431 UBR1Q8IWV7 1749 aa25.5■■□□□ 1.67
MUC1-220ENST00000498431 MAP3K1Q13233 1512 aa25.49■■□□□ 1.67
MUC1-220ENST00000498431 LRRC7Q96NW7 1537 aa25.48■■□□□ 1.67
MUC1-220ENST00000498431 DUOX2Q9NRD8 1548 aa25.47■■□□□ 1.67
MUC1-220ENST00000498431 SYNMO15061 1565 aa25.44■■□□□ 1.66
MUC1-220ENST00000498431 PRDM15P57071 1507 aaPredicted RBP25.42■■□□□ 1.66
MUC1-220ENST00000498431 CROCC2H7BZ55 1655 aa25.42■■□□□ 1.66
MUC1-220ENST00000498431 SCAF11Q99590 1463 aaKnown RBP25.42■■□□□ 1.66
MUC1-220ENST00000498431 SENP3Q9H4L4 574 aaPredicted RBP25.42■■□□□ 1.66
MUC1-220ENST00000498431 KIF15Q9NS87 1388 aa25.42■■□□□ 1.66
MUC1-220ENST00000498431 LTKP29376 864 aa25.41■■□□□ 1.66
MUC1-220ENST00000498431 ARHGAP23Q9P227 1491 aa25.4■■□□□ 1.66
MUC1-220ENST00000498431 ABCC5O15440 1437 aa25.39■■□□□ 1.66
MUC1-220ENST00000498431 SLIT1O75093 1534 aa25.39■■□□□ 1.66
MUC1-220ENST00000498431 ARHGAP31Q2M1Z3 1444 aa25.38■■□□□ 1.65
MUC1-220ENST00000498431 RRP7BPQ9NSQ0 103 aa25.38■■□□□ 1.65
MUC1-220ENST00000498431 PTPN23Q9H3S7 1636 aa25.37■■□□□ 1.65
MUC1-220ENST00000498431 ERBINQ96RT1 1412 aa25.37■■□□□ 1.65
MUC1-220ENST00000498431 TXNDC2Q86VQ3 553 aa25.36■■□□□ 1.65
MUC1-220ENST00000498431 PIK3C2BO00750 1634 aa25.35■■□□□ 1.65
MUC1-220ENST00000498431 XIRP1Q702N8 1843 aaKnown RBP25.35■■□□□ 1.65
MUC1-220ENST00000498431 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.34■■□□□ 1.65
MUC1-220ENST00000498431 DAPK1P53355 1430 aa25.32■■□□□ 1.64
MUC1-220ENST00000498431 PHF23Q9BUL5 403 aaPredicted RBP25.32■■□□□ 1.64
MUC1-220ENST00000498431 TMEM2Q9UHN6 1383 aa25.28■■□□□ 1.64
MUC1-220ENST00000498431 EID1Q9Y6B2 187 aa25.27■■□□□ 1.64
MUC1-220ENST00000498431 FGD6Q6ZV73 1430 aa25.27■■□□□ 1.64
MUC1-220ENST00000498431 CHIC2Q9UKJ5 165 aa25.26■■□□□ 1.63
MUC1-220ENST00000498431 KANK1Q14678 1352 aa25.25■■□□□ 1.63
MUC1-220ENST00000498431 EFCAB6Q5THR3 1501 aa25.24■■□□□ 1.63
MUC1-220ENST00000498431 LMTK2Q8IWU2 1503 aa25.24■■□□□ 1.63
MUC1-220ENST00000498431 IDI1Q13907 227 aa25.23■■□□□ 1.63
MUC1-220ENST00000498431 KDM5AP29375 1690 aaKnown RBP25.23■■□□□ 1.63
MUC1-220ENST00000498431 STAG3Q9UJ98 1225 aa25.22■■□□□ 1.63
MUC1-220ENST00000498431 ANKRD30AQ9BXX3 1397 aa25.2■■□□□ 1.63
MUC1-220ENST00000498431 APLP2Q06481 763 aa25.2■■□□□ 1.62
MUC1-220ENST00000498431 TET3O43151 1660 aa25.19■■□□□ 1.62
MUC1-220ENST00000498431 TMEM94Q12767 1356 aa25.18■■□□□ 1.62
MUC1-220ENST00000498431 RGS17Q9UGC6 210 aaPredicted RBP25.18■■□□□ 1.62
MUC1-220ENST00000498431 NOS1P29475 1434 aa25.18■■□□□ 1.62
MUC1-220ENST00000498431 SLC26A8Q96RN1 970 aa25.17■■□□□ 1.62
MUC1-220ENST00000498431 ADGRB3O60242 1522 aa25.16■■□□□ 1.62
MUC1-220ENST00000498431 FAM135BQ49AJ0 1406 aa25.15■■□□□ 1.62
MUC1-220ENST00000498431 RBM33Q96EV2 1170 aaKnown RBP25.15■■□□□ 1.62
MUC1-220ENST00000498431 KCNA6P17658 529 aa25.13■■□□□ 1.61
MUC1-220ENST00000498431 ADGRL2O95490 1459 aa25.12■■□□□ 1.61
MUC1-220ENST00000498431 ROBO1Q9Y6N7 1651 aa25.11■■□□□ 1.61
MUC1-220ENST00000498431 PROSER2Q86WR7 435 aaPredicted RBP25.1■■□□□ 1.61
MUC1-220ENST00000498431 NWD1Q149M9 1564 aa25.1■■□□□ 1.61
MUC1-220ENST00000498431 MYO5BQ9ULV0 1848 aa25.07■■□□□ 1.6
MUC1-220ENST00000498431 NKTRP30414 1462 aaKnown RBP25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms