RNA–Protein interactions for RNA: ENST00000498347.1

FAM3D-205, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 2

Gene FAM3D, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-205ENST00000498347 PREX2Q70Z35 1606 aa14.9□□□□□ -0.02
FAM3D-205ENST00000498347 KIAA1107Q9UPP5 1409 aa14.9□□□□□ -0.02
FAM3D-205ENST00000498347 CFDP1Q9UEE9 299 aaPredicted RBP14.89□□□□□ -0.03
FAM3D-205ENST00000498347 DEPDC5O75140 1603 aa14.88□□□□□ -0.03
FAM3D-205ENST00000498347 RNF17Q9BXT8 1623 aaKnown RBP14.88□□□□□ -0.03
FAM3D-205ENST00000498347 ATP7AQ04656 1500 aa14.88□□□□□ -0.03
FAM3D-205ENST00000498347 KIF3BO15066 747 aa14.88□□□□□ -0.03
FAM3D-205ENST00000498347 PLXNC1O60486 1568 aa14.88□□□□□ -0.03
FAM3D-205ENST00000498347 NLRP1Q9C000 1473 aa14.88□□□□□ -0.03
FAM3D-205ENST00000498347 UGGT1Q9NYU2 1555 aa14.87□□□□□ -0.03
FAM3D-205ENST00000498347 DHX29Q7Z478 1369 aaKnown RBP14.86□□□□□ -0.03
FAM3D-205ENST00000498347 ZNF772Q68DY9 489 aaPredicted RBP14.86□□□□□ -0.03
FAM3D-205ENST00000498347 STRCP1A6NGW2 1772 aa14.85□□□□□ -0.03
FAM3D-205ENST00000498347 PZPP20742 1482 aa14.85□□□□□ -0.03
FAM3D-205ENST00000498347 TRIM52Q96A61 297 aa14.85□□□□□ -0.03
FAM3D-205ENST00000498347 PLEKHH2Q8IVE3 1493 aa14.84□□□□□ -0.03
FAM3D-205ENST00000498347 SYCP2Q9BX26 1530 aa14.84□□□□□ -0.03
FAM3D-205ENST00000498347 IQGAP1P46940 1657 aa14.84□□□□□ -0.03
FAM3D-205ENST00000498347 ARHGAP35Q9NRY4 1499 aa14.83□□□□□ -0.03
FAM3D-205ENST00000498347 GPATCH8Q9UKJ3 1502 aaKnown RBP14.83□□□□□ -0.04
FAM3D-205ENST00000498347 SYNMO15061 1565 aa14.82□□□□□ -0.04
FAM3D-205ENST00000498347 RXRBP28702 533 aa14.82□□□□□ -0.04
FAM3D-205ENST00000498347 TXNDC2Q86VQ3 553 aa14.82□□□□□ -0.04
FAM3D-205ENST00000498347 SETD1AO15047 1707 aaKnown RBP14.81□□□□□ -0.04
FAM3D-205ENST00000498347 CDC42BPAQ5VT25 1732 aa14.8□□□□□ -0.04
FAM3D-205ENST00000498347 EHMT2Q96KQ7 1210 aa14.8□□□□□ -0.04
FAM3D-205ENST00000498347 JCADQ9P266 1359 aa14.8□□□□□ -0.04
FAM3D-205ENST00000498347 LTKP29376 864 aa14.79□□□□□ -0.04
FAM3D-205ENST00000498347 MEX3CQ5U5Q3 659 aaKnown RBP14.79□□□□□ -0.04
FAM3D-205ENST00000498347 PROSER2Q86WR7 435 aaPredicted RBP14.79□□□□□ -0.04
FAM3D-205ENST00000498347 INO80Q9ULG1 1556 aaPredicted RBP14.78□□□□□ -0.04
FAM3D-205ENST00000498347 KDM5DQ9BY66 1539 aa14.78□□□□□ -0.04
FAM3D-205ENST00000498347 RTEL1-TNFRSF6BF6WH68 1400 aa14.78□□□□□ -0.04
FAM3D-205ENST00000498347 SLAIN2Q9P270 581 aa14.78□□□□□ -0.04
FAM3D-205ENST00000498347 EID1Q9Y6B2 187 aa14.78□□□□□ -0.04
FAM3D-205ENST00000498347 ADGBQ8N7X0 1667 aa14.77□□□□□ -0.04
FAM3D-205ENST00000498347 CCDC18Q5T9S5 1454 aa14.77□□□□□ -0.04
FAM3D-205ENST00000498347 TMEM94Q12767 1356 aa14.76□□□□□ -0.05
FAM3D-205ENST00000498347 CCNB3Q8WWL7 1395 aa14.76□□□□□ -0.05
FAM3D-205ENST00000498347 KCNA6P17658 529 aa14.76□□□□□ -0.05
FAM3D-205ENST00000498347 CASKIN1Q8WXD9 1431 aa14.75□□□□□ -0.05
FAM3D-205ENST00000498347 LRRIQ1Q96JM4 1722 aa14.75□□□□□ -0.05
FAM3D-205ENST00000498347 SPATA31A6Q5VVP1 1343 aa14.75□□□□□ -0.05
FAM3D-205ENST00000498347 ZNF644Q9H582 1327 aaPredicted RBP14.75□□□□□ -0.05
FAM3D-205ENST00000498347 FOXD1Q16676 465 aa14.75□□□□□ -0.05
FAM3D-205ENST00000498347 CHIC1Q5VXU3 224 aa14.75□□□□□ -0.05
FAM3D-205ENST00000498347 RSPH4AQ5TD94 716 aa14.73□□□□□ -0.05
FAM3D-205ENST00000498347 SCAF11Q99590 1463 aaKnown RBP14.73□□□□□ -0.05
FAM3D-205ENST00000498347 XIRP1Q702N8 1843 aaKnown RBP14.71□□□□□ -0.05
FAM3D-205ENST00000498347 RBM33Q96EV2 1170 aaKnown RBP14.71□□□□□ -0.05
FAM3D-205ENST00000498347 ZRANB1Q9UGI0 708 aa14.71□□□□□ -0.05
FAM3D-205ENST00000498347 ROBO1Q9Y6N7 1651 aa14.71□□□□□ -0.06
FAM3D-205ENST00000498347 MBD5Q9P267 1494 aa14.69□□□□□ -0.06
FAM3D-205ENST00000498347 ZC3H13Q5T200 1668 aaKnown RBP14.69□□□□□ -0.06
FAM3D-205ENST00000498347 SRCAPQ6ZRS2 3230 aa14.69□□□□□ -0.06
FAM3D-205ENST00000498347 LRRC9Q6ZRR7 1453 aa14.69□□□□□ -0.06
FAM3D-205ENST00000498347 CDK12Q9NYV4 1490 aaPredicted RBP14.68□□□□□ -0.06
FAM3D-205ENST00000498347 MSH6P52701 1360 aa14.67□□□□□ -0.06
FAM3D-205ENST00000498347 ARHGAP23Q9P227 1491 aa14.65□□□□□ -0.06
FAM3D-205ENST00000498347 TSPY4P0CV99 314 aa14.65□□□□□ -0.06
FAM3D-205ENST00000498347 TSPY10P0CW01 314 aa14.65□□□□□ -0.06
FAM3D-205ENST00000498347 SLC26A8Q96RN1 970 aa14.65□□□□□ -0.06
FAM3D-205ENST00000498347 FGD6Q6ZV73 1430 aa14.65□□□□□ -0.06
FAM3D-205ENST00000498347 NUTM2BA6NNL0 878 aaPredicted RBP14.64□□□□□ -0.07
FAM3D-205ENST00000498347 NUTM2EB1AL46 878 aaPredicted RBP14.64□□□□□ -0.07
FAM3D-205ENST00000498347 NUTM2DQ5VT03 806 aaPredicted RBP14.64□□□□□ -0.07
FAM3D-205ENST00000498347 NUTM2AQ8IVF1 878 aaPredicted RBP14.64□□□□□ -0.07
FAM3D-205ENST00000498347 QTRT2Q9H974 415 aaKnown RBP14.64□□□□□ -0.07
FAM3D-205ENST00000498347 STAG3Q9UJ98 1225 aa14.64□□□□□ -0.07
FAM3D-205ENST00000498347 PHLPP1O60346 1717 aa14.63□□□□□ -0.07
FAM3D-205ENST00000498347 NCOA2Q15596 1464 aa14.63□□□□□ -0.07
FAM3D-205ENST00000498347 SLIT1O75093 1534 aa14.63□□□□□ -0.07
FAM3D-205ENST00000498347 RBM6P78332 1123 aaKnown RBP14.63□□□□□ -0.07
FAM3D-205ENST00000498347 LRP6O75581 1613 aa14.63□□□□□ -0.07
FAM3D-205ENST00000498347 ERVK-7P63135 1459 aa14.62□□□□□ -0.07
FAM3D-205ENST00000498347 TMEM2Q9UHN6 1383 aa14.61□□□□□ -0.07
FAM3D-205ENST00000498347 AFF2P51816 1311 aa14.61□□□□□ -0.07
FAM3D-205ENST00000498347 MTUS2Q5JR59 1369 aa14.6□□□□□ -0.07
FAM3D-205ENST00000498347 UBR1Q8IWV7 1749 aa14.59□□□□□ -0.07
FAM3D-205ENST00000498347 BCANQ96GW7 911 aa14.59□□□□□ -0.07
FAM3D-205ENST00000498347 PRDM15P57071 1507 aaPredicted RBP14.59□□□□□ -0.07
FAM3D-205ENST00000498347 CFAP65Q6ZU64 1925 aaKnown RBP14.58□□□□□ -0.07
FAM3D-205ENST00000498347 FYCO1Q9BQS8 1478 aa14.58□□□□□ -0.08
FAM3D-205ENST00000498347 MAP3K1Q13233 1512 aa14.58□□□□□ -0.08
FAM3D-205ENST00000498347 NGLY1Q96IV0 654 aa14.58□□□□□ -0.08
FAM3D-205ENST00000498347 ABCC3O15438 1527 aa14.56□□□□□ -0.08
FAM3D-205ENST00000498347 CADPS2Q86UW7 1296 aa14.56□□□□□ -0.08
FAM3D-205ENST00000498347 CCDC125Q86Z20 511 aa14.56□□□□□ -0.08
FAM3D-205ENST00000498347 CCDC141Q6ZP82 1450 aa14.56□□□□□ -0.08
FAM3D-205ENST00000498347 C19orf44Q9H6X5 657 aa14.55□□□□□ -0.08
FAM3D-205ENST00000498347 COL16A1Q07092 1604 aaPredicted RBP14.55□□□□□ -0.08
FAM3D-205ENST00000498347 ATF3P18847 181 aa14.54□□□□□ -0.08
FAM3D-205ENST00000498347 IDI1Q13907 227 aa14.54□□□□□ -0.08
FAM3D-205ENST00000498347 C14orf37Q86TY3 774 aa14.54□□□□□ -0.08
FAM3D-205ENST00000498347 ATAD2Q6PL18 1390 aa14.54□□□□□ -0.08
FAM3D-205ENST00000498347 NKTRP30414 1462 aaKnown RBP14.53□□□□□ -0.08
FAM3D-205ENST00000498347 TET3O43151 1660 aa14.52□□□□□ -0.08
FAM3D-205ENST00000498347 NCOA3Q9Y6Q9 1424 aa14.52□□□□□ -0.08
FAM3D-205ENST00000498347 C8orf37Q96NL8 207 aa14.52□□□□□ -0.09
FAM3D-205ENST00000498347 RGS12O14924 1447 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms