RNA–Protein interactions for RNA: ENST00000498274.5

PCNP-207, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

TSL 2

Gene PCNP, Length 786 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-207ENST00000498274 TSPY10P0CW01 314 aa29.4■■■□□ 2.3
PCNP-207ENST00000498274 TCOF1Q13428 1488 aaKnown RBP29.4■■■□□ 2.3
PCNP-207ENST00000498274 A2ML1A8K2U0 1454 aa29.38■■■□□ 2.29
PCNP-207ENST00000498274 TNRQ92752 1358 aa29.38■■■□□ 2.29
PCNP-207ENST00000498274 VPS8Q8N3P4 1428 aa29.37■■■□□ 2.29
PCNP-207ENST00000498274 IQSEC2Q5JU85 1478 aa29.36■■■□□ 2.29
PCNP-207ENST00000498274 KANK4Q5T7N3 995 aaPredicted RBP29.36■■■□□ 2.29
PCNP-207ENST00000498274 LRRC9Q6ZRR7 1453 aa29.36■■■□□ 2.29
PCNP-207ENST00000498274 KDM5DQ9BY66 1539 aa29.35■■■□□ 2.29
PCNP-207ENST00000498274 UBAP1LF5GYI3 381 aa29.34■■■□□ 2.29
PCNP-207ENST00000498274 ILDR2Q71H61 639 aa29.34■■■□□ 2.29
PCNP-207ENST00000498274 DNMT1P26358 1616 aaKnown RBP29.33■■■□□ 2.29
PCNP-207ENST00000498274 PZPP20742 1482 aa29.31■■■□□ 2.28
PCNP-207ENST00000498274 ARHGEF5Q12774 1597 aa29.3■■■□□ 2.28
PCNP-207ENST00000498274 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.26■■■□□ 2.28
PCNP-207ENST00000498274 MIA2Q96PC5 1412 aa29.25■■■□□ 2.27
PCNP-207ENST00000498274 FAM135AQ9P2D6 1515 aa29.22■■■□□ 2.27
PCNP-207ENST00000498274 ANKLE2Q86XL3 938 aa29.22■■■□□ 2.27
PCNP-207ENST00000498274 THEMISQ8N1K5 641 aaPredicted RBP29.21■■■□□ 2.27
PCNP-207ENST00000498274 SPATA31D1Q6ZQQ2 1576 aa29.19■■■□□ 2.26
PCNP-207ENST00000498274 NEURL4Q96JN8 1562 aa29.19■■■□□ 2.26
PCNP-207ENST00000498274 MYOM3Q5VTT5 1437 aa29.19■■■□□ 2.26
PCNP-207ENST00000498274 SCAF1Q9H7N4 1312 aaKnown RBP29.18■■■□□ 2.26
PCNP-207ENST00000498274 NLRP1Q9C000 1473 aa29.17■■■□□ 2.26
PCNP-207ENST00000498274 UGGT1Q9NYU2 1555 aa29.16■■■□□ 2.26
PCNP-207ENST00000498274 MAST1Q9Y2H9 1570 aa29.16■■■□□ 2.26
PCNP-207ENST00000498274 ABCC3O15438 1527 aa29.15■■■□□ 2.26
PCNP-207ENST00000498274 PIP4K2BP78356 416 aa29.15■■■□□ 2.26
PCNP-207ENST00000498274 MAP3K1Q13233 1512 aa29.14■■■□□ 2.25
PCNP-207ENST00000498274 POLR1AO95602 1720 aaPredicted RBP29.13■■■□□ 2.25
PCNP-207ENST00000498274 SHANK2Q9UPX8 1470 aa29.12■■■□□ 2.25
PCNP-207ENST00000498274 RNF17Q9BXT8 1623 aaKnown RBP29.12■■■□□ 2.25
PCNP-207ENST00000498274 NPHP4O75161 1426 aaPredicted RBP29.11■■■□□ 2.25
PCNP-207ENST00000498274 SOCS7O14512 581 aa29.09■■■□□ 2.25
PCNP-207ENST00000498274 RRP7BPQ9NSQ0 103 aa29.09■■■□□ 2.25
PCNP-207ENST00000498274 APLP2Q06481 763 aa29.08■■■□□ 2.25
PCNP-207ENST00000498274 ERVK-7P63135 1459 aa29.08■■■□□ 2.25
PCNP-207ENST00000498274 CPS1P31327 1500 aa29.07■■■□□ 2.24
PCNP-207ENST00000498274 MROH1Q8NDA8 1641 aa29.06■■■□□ 2.24
PCNP-207ENST00000498274 KIF15Q9NS87 1388 aa29.05■■■□□ 2.24
PCNP-207ENST00000498274 TOM1O60784 492 aa29.05■■■□□ 2.24
PCNP-207ENST00000498274 EIF2AK4Q9P2K8 1649 aaKnown RBP29.05■■■□□ 2.24
PCNP-207ENST00000498274 DUOX2Q9NRD8 1548 aa29.04■■■□□ 2.24
PCNP-207ENST00000498274 HSPA1LP34931 641 aa29.04■■■□□ 2.24
PCNP-207ENST00000498274 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.04■■■□□ 2.243e-8■■■■□ 19.7
PCNP-207ENST00000498274 VWDEQ8N2E2 1590 aa29.04■■■□□ 2.24
PCNP-207ENST00000498274 ABCC5O15440 1437 aa29.03■■■□□ 2.24
PCNP-207ENST00000498274 ZC3H13Q5T200 1668 aaKnown RBP29.03■■■□□ 2.24
PCNP-207ENST00000498274 MED14O60244 1454 aa29.03■■■□□ 2.24
PCNP-207ENST00000498274 CEP152O94986 1710 aa29■■■□□ 2.23
PCNP-207ENST00000498274 CHIC2Q9UKJ5 165 aa29■■■□□ 2.23
PCNP-207ENST00000498274 DEPDC5O75140 1603 aa28.99■■■□□ 2.23
PCNP-207ENST00000498274 PTPN23Q9H3S7 1636 aa28.97■■■□□ 2.23
PCNP-207ENST00000498274 SENP3Q9H4L4 574 aaPredicted RBP28.96■■■□□ 2.23
PCNP-207ENST00000498274 IQGAP1P46940 1657 aa28.96■■■□□ 2.23
PCNP-207ENST00000498274 DAPK1P53355 1430 aa28.95■■■□□ 2.23
PCNP-207ENST00000498274 ERBINQ96RT1 1412 aa28.94■■■□□ 2.22
PCNP-207ENST00000498274 CFAP65Q6ZU64 1925 aaKnown RBP28.93■■■□□ 2.22
PCNP-207ENST00000498274 LTKP29376 864 aa28.93■■■□□ 2.22
PCNP-207ENST00000498274 TXNDC2Q86VQ3 553 aa28.92■■■□□ 2.22
PCNP-207ENST00000498274 FGD6Q6ZV73 1430 aa28.92■■■□□ 2.22
PCNP-207ENST00000498274 PRDM15P57071 1507 aaPredicted RBP28.9■■■□□ 2.22
PCNP-207ENST00000498274 CROCC2H7BZ55 1655 aa28.9■■■□□ 2.22
PCNP-207ENST00000498274 ARHGAP31Q2M1Z3 1444 aa28.89■■■□□ 2.22
PCNP-207ENST00000498274 UBR1Q8IWV7 1749 aa28.89■■■□□ 2.21
PCNP-207ENST00000498274 SCAF11Q99590 1463 aaKnown RBP28.88■■■□□ 2.21
PCNP-207ENST00000498274 LRRC7Q96NW7 1537 aa28.88■■■□□ 2.21
PCNP-207ENST00000498274 KANK1Q14678 1352 aa28.88■■■□□ 2.21
PCNP-207ENST00000498274 STAG3Q9UJ98 1225 aa28.87■■■□□ 2.21
PCNP-207ENST00000498274 ANKRD30AQ9BXX3 1397 aa28.86■■■□□ 2.21
PCNP-207ENST00000498274 ALKQ9UM73 1620 aa28.85■■■□□ 2.21
PCNP-207ENST00000498274 STRCP1A6NGW2 1772 aa28.85■■■□□ 2.21
PCNP-207ENST00000498274 EID1Q9Y6B2 187 aa28.84■■■□□ 2.21
PCNP-207ENST00000498274 ARHGAP23Q9P227 1491 aa28.82■■■□□ 2.2
PCNP-207ENST00000498274 FAM50AQ14320 339 aaKnown RBP28.81■■■□□ 2.2
PCNP-207ENST00000498274 SLIT1O75093 1534 aa28.8■■■□□ 2.2
PCNP-207ENST00000498274 MED1Q15648 1581 aaPredicted RBP28.79■■■□□ 2.2
PCNP-207ENST00000498274 IDI1Q13907 227 aa28.79■■■□□ 2.2
PCNP-207ENST00000498274 PIK3C2BO00750 1634 aa28.78■■■□□ 2.2
PCNP-207ENST00000498274 TMEM2Q9UHN6 1383 aa28.77■■■□□ 2.2
PCNP-207ENST00000498274 SYNMO15061 1565 aa28.75■■■□□ 2.19
PCNP-207ENST00000498274 LMTK2Q8IWU2 1503 aa28.73■■■□□ 2.19
PCNP-207ENST00000498274 SLC26A8Q96RN1 970 aa28.71■■■□□ 2.19
PCNP-207ENST00000498274 PHF23Q9BUL5 403 aaPredicted RBP28.71■■■□□ 2.19
PCNP-207ENST00000498274 EFCAB6Q5THR3 1501 aa28.7■■■□□ 2.19
PCNP-207ENST00000498274 RBM33Q96EV2 1170 aaKnown RBP28.67■■■□□ 2.18
PCNP-207ENST00000498274 BCANQ96GW7 911 aa28.67■■■□□ 2.18
PCNP-207ENST00000498274 ADGRL2O95490 1459 aa28.66■■■□□ 2.18
PCNP-207ENST00000498274 NOS1P29475 1434 aa28.66■■■□□ 2.18
PCNP-207ENST00000498274 ANKRD50Q9ULJ7 1429 aa28.64■■■□□ 2.18
PCNP-207ENST00000498274 TMEM94Q12767 1356 aa28.62■■■□□ 2.17
PCNP-207ENST00000498274 KCNA6P17658 529 aa28.62■■■□□ 2.17
PCNP-207ENST00000498274 SLC52A1Q9NWF4 448 aa28.61■■■□□ 2.17
PCNP-207ENST00000498274 PROSER2Q86WR7 435 aaPredicted RBP28.6■■■□□ 2.17
PCNP-207ENST00000498274 ADGRB3O60242 1522 aa28.59■■■□□ 2.17
PCNP-207ENST00000498274 XIRP1Q702N8 1843 aaKnown RBP28.57■■■□□ 2.16
PCNP-207ENST00000498274 TET3O43151 1660 aa28.56■■■□□ 2.16
PCNP-207ENST00000498274 KDM5AP29375 1690 aaKnown RBP28.54■■■□□ 2.16
PCNP-207ENST00000498274 CHGAP10645 457 aaKnown RBP28.54■■■□□ 2.16
PCNP-207ENST00000498274 PPP1R15AO75807 674 aaPredicted RBP28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms