RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 DUOX2Q9NRD8 1548 aa17.72■□□□□ 0.43
AFF3-215ENST00000498090 DIP2CQ9Y2E4 1556 aa17.7■□□□□ 0.42
AFF3-215ENST00000498090 YEATS2Q9ULM3 1422 aa17.7■□□□□ 0.42
AFF3-215ENST00000498090 ERBINQ96RT1 1412 aa17.69■□□□□ 0.42
AFF3-215ENST00000498090 MYT1LQ9UL68 1186 aa17.68■□□□□ 0.42
AFF3-215ENST00000498090 MAGI2Q86UL8 1455 aa17.66■□□□□ 0.42
AFF3-215ENST00000498090 A2MP01023 1474 aa17.65■□□□□ 0.42
AFF3-215ENST00000498090 DHX29Q7Z478 1369 aaKnown RBP17.65■□□□□ 0.42
AFF3-215ENST00000498090 PPP1R15AO75807 674 aaPredicted RBP17.64■□□□□ 0.42
AFF3-215ENST00000498090 PLPPR3Q6T4P5 718 aa17.64■□□□□ 0.42
AFF3-215ENST00000498090 ARHGEF40Q8TER5 1519 aa17.63■□□□□ 0.41
AFF3-215ENST00000498090 UNC13BO14795 1591 aa17.63■□□□□ 0.41
AFF3-215ENST00000498090 SIN3AQ96ST3 1273 aa17.63■□□□□ 0.41
AFF3-215ENST00000498090 EIF2AK4Q9P2K8 1649 aaKnown RBP17.62■□□□□ 0.41
AFF3-215ENST00000498090 KDM5DQ9BY66 1539 aa17.61■□□□□ 0.41
AFF3-215ENST00000498090 PZPP20742 1482 aa17.61■□□□□ 0.41
AFF3-215ENST00000498090 FOXD1Q16676 465 aa17.61■□□□□ 0.41
AFF3-215ENST00000498090 TRIM52Q96A61 297 aa17.6■□□□□ 0.41
AFF3-215ENST00000498090 TONSLQ96HA7 1378 aa17.6■□□□□ 0.41
AFF3-215ENST00000498090 MROH1Q8NDA8 1641 aa17.59■□□□□ 0.41
AFF3-215ENST00000498090 DEPDC5O75140 1603 aa17.58■□□□□ 0.41
AFF3-215ENST00000498090 ATP10AO60312 1499 aa17.58■□□□□ 0.41
AFF3-215ENST00000498090 REREQ9P2R6 1566 aa17.58■□□□□ 0.4
AFF3-215ENST00000498090 BCORL1Q5H9F3 1711 aa17.57■□□□□ 0.4
AFF3-215ENST00000498090 SIGLEC1Q9BZZ2 1709 aa17.57■□□□□ 0.4
AFF3-215ENST00000498090 RNF17Q9BXT8 1623 aaKnown RBP17.57■□□□□ 0.4
AFF3-215ENST00000498090 NUP155O75694 1391 aa17.56■□□□□ 0.4
AFF3-215ENST00000498090 KDM4FA0A1W2PPD8 638 aa17.55■□□□□ 0.4
AFF3-215ENST00000498090 KIF3BO15066 747 aa17.55■□□□□ 0.4
AFF3-215ENST00000498090 PRDM15P57071 1507 aaPredicted RBP17.55■□□□□ 0.4
AFF3-215ENST00000498090 IQGAP3Q86VI3 1631 aa17.54■□□□□ 0.4
AFF3-215ENST00000498090 FAM135AQ9P2D6 1515 aa17.54■□□□□ 0.4
AFF3-215ENST00000498090 MPHOSPH9Q99550 1183 aa17.54■□□□□ 0.4
AFF3-215ENST00000498090 VWDEQ8N2E2 1590 aa17.54■□□□□ 0.4
AFF3-215ENST00000498090 CCER2I3L3R5 266 aa17.52■□□□□ 0.4
AFF3-215ENST00000498090 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.52■□□□□ 0.4
AFF3-215ENST00000498090 AGLP35573 1532 aa17.52■□□□□ 0.4
AFF3-215ENST00000498090 SLC4A1APQ9BWU0 796 aaKnown RBP17.51■□□□□ 0.39
AFF3-215ENST00000498090 DDX10Q13206 875 aaKnown RBP17.48■□□□□ 0.39
AFF3-215ENST00000498090 LMTK2Q8IWU2 1503 aa17.46■□□□□ 0.39
AFF3-215ENST00000498090 ANP32CO43423 234 aa17.45■□□□□ 0.38
AFF3-215ENST00000498090 PKD2Q13563 968 aa17.45■□□□□ 0.38
AFF3-215ENST00000498090 GGT6Q6P531 493 aa17.45■□□□□ 0.38
AFF3-215ENST00000498090 ABCC3O15438 1527 aa17.45■□□□□ 0.38
AFF3-215ENST00000498090 KANK1Q14678 1352 aa17.45■□□□□ 0.38
AFF3-215ENST00000498090 CEP152O94986 1710 aa17.44■□□□□ 0.38
AFF3-215ENST00000498090 TET3O43151 1660 aa17.44■□□□□ 0.38
AFF3-215ENST00000498090 ANKRD30BQ9BXX2 1392 aa17.43■□□□□ 0.38
AFF3-215ENST00000498090 SUPT16HQ9Y5B9 1047 aaKnown RBP17.42■□□□□ 0.38
AFF3-215ENST00000498090 EFCAB6Q5THR3 1501 aa17.42■□□□□ 0.38
AFF3-215ENST00000498090 E9PCH4 1651 aa17.41■□□□□ 0.38
AFF3-215ENST00000498090 MYT1Q01538 1121 aa17.41■□□□□ 0.38
AFF3-215ENST00000498090 ZC3H13Q5T200 1668 aaKnown RBP17.39■□□□□ 0.38
AFF3-215ENST00000498090 PLA2R1Q13018 1463 aa17.38■□□□□ 0.37
AFF3-215ENST00000498090 CAMSAP1Q5T5Y3 1602 aa17.38■□□□□ 0.37
AFF3-215ENST00000498090 MLECQ14165 292 aa17.38■□□□□ 0.37
AFF3-215ENST00000498090 ARID4BQ4LE39 1312 aaPredicted RBP17.37■□□□□ 0.37
AFF3-215ENST00000498090 WASHC2CQ9Y4E1 1318 aa17.37■□□□□ 0.37
AFF3-215ENST00000498090 NPATQ14207 1427 aa17.36■□□□□ 0.37
AFF3-215ENST00000498090 ADAMTSL3P82987 1691 aa17.34■□□□□ 0.37
AFF3-215ENST00000498090 CLTCQ00610 1675 aaKnown RBP17.34■□□□□ 0.37
AFF3-215ENST00000498090 PTPRTO14522 1441 aa17.33■□□□□ 0.37
AFF3-215ENST00000498090 ARHGAP31Q2M1Z3 1444 aa17.33■□□□□ 0.36
AFF3-215ENST00000498090 PPP6R1Q9UPN7 881 aa17.32■□□□□ 0.36
AFF3-215ENST00000498090 RPRD2Q5VT52 1461 aaKnown RBP17.32■□□□□ 0.36
AFF3-215ENST00000498090 SPHKAPQ2M3C7 1700 aa17.32■□□□□ 0.36
AFF3-215ENST00000498090 TRPM2O94759 1503 aa17.32■□□□□ 0.36
AFF3-215ENST00000498090 EIF4G2P78344 907 aaKnown RBP eCLIP17.29■□□□□ 0.36
AFF3-215ENST00000498090 NOS1P29475 1434 aa17.28■□□□□ 0.36
AFF3-215ENST00000498090 CLTCL1P53675 1640 aa17.28■□□□□ 0.36
AFF3-215ENST00000498090 MADDQ8WXG6 1647 aa17.28■□□□□ 0.36
AFF3-215ENST00000498090 UGGT1Q9NYU2 1555 aa17.27■□□□□ 0.36
AFF3-215ENST00000498090 CCDC144AA2RUR9 1427 aa17.27■□□□□ 0.36
AFF3-215ENST00000498090 PTPRMP28827 1452 aa17.27■□□□□ 0.35
AFF3-215ENST00000498090 HIRIP3Q9BW71 556 aaPredicted RBP17.26■□□□□ 0.35
AFF3-215ENST00000498090 SYNMO15061 1565 aa17.26■□□□□ 0.35
AFF3-215ENST00000498090 ERVK-7P63135 1459 aa17.25■□□□□ 0.35
AFF3-215ENST00000498090 CNTLNQ9NXG0 1405 aa17.25■□□□□ 0.35
AFF3-215ENST00000498090 PREX1Q8TCU6 1659 aa17.25■□□□□ 0.35
AFF3-215ENST00000498090 FER1L4A9Z1Z3 1794 aa17.25■□□□□ 0.35
AFF3-215ENST00000498090 MROH2AA6NES4 1674 aa17.24■□□□□ 0.35
AFF3-215ENST00000498090 HSPA5P11021 654 aaKnown RBP17.24■□□□□ 0.35
AFF3-215ENST00000498090 ZMYM3Q14202 1370 aa17.24■□□□□ 0.35
AFF3-215ENST00000498090 NEFLP07196 543 aa17.23■□□□□ 0.35
AFF3-215ENST00000498090 SPATA31D1Q6ZQQ2 1576 aa17.22■□□□□ 0.35
AFF3-215ENST00000498090 FBXO31Q5XUX0 539 aaPredicted RBP17.22■□□□□ 0.35
AFF3-215ENST00000498090 L3MBTL2Q969R5 705 aa17.22■□□□□ 0.35
AFF3-215ENST00000498090 PIK3C2BO00750 1634 aa17.21■□□□□ 0.35
AFF3-215ENST00000498090 ESF1Q9H501 851 aaKnown RBP17.21■□□□□ 0.35
AFF3-215ENST00000498090 SPATA31E1Q6ZUB1 1445 aa17.2■□□□□ 0.34
AFF3-215ENST00000498090 WASHC2AQ641Q2 1341 aa17.2■□□□□ 0.34
AFF3-215ENST00000498090 CFAP65Q6ZU64 1925 aaKnown RBP17.19■□□□□ 0.34
AFF3-215ENST00000498090 RIMS1Q86UR5 1692 aaKnown RBP17.19■□□□□ 0.34
AFF3-215ENST00000498090 C3P01024 1663 aa17.18■□□□□ 0.34
AFF3-215ENST00000498090 ADGRB3O60242 1522 aa17.17■□□□□ 0.34
AFF3-215ENST00000498090 CEBPAP49715 358 aaPredicted RBP17.16■□□□□ 0.34
AFF3-215ENST00000498090 NEURL4Q96JN8 1562 aa17.16■□□□□ 0.34
AFF3-215ENST00000498090 CCDC7Q96M83 1385 aa17.14■□□□□ 0.34
AFF3-215ENST00000498090 IDI1Q13907 227 aa17.13■□□□□ 0.33
AFF3-215ENST00000498090 FKBP8Q14318 412 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms