RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 RRP7BPQ9NSQ0 103 aa23.66■■□□□ 1.38
NUP50-219ENST00000497960 KIF15Q9NS87 1388 aa23.65■■□□□ 1.38
NUP50-219ENST00000497960 KDM5DQ9BY66 1539 aa23.65■■□□□ 1.38
NUP50-219ENST00000497960 DUOX2Q9NRD8 1548 aa23.65■■□□□ 1.38
NUP50-219ENST00000497960 DNMT1P26358 1616 aaKnown RBP23.64■■□□□ 1.38
NUP50-219ENST00000497960 CHIC2Q9UKJ5 165 aa23.63■■□□□ 1.37
NUP50-219ENST00000497960 DMRT2Q9Y5R5 561 aa23.63■■□□□ 1.37
NUP50-219ENST00000497960 CROCC2H7BZ55 1655 aa23.63■■□□□ 1.37
NUP50-219ENST00000497960 ANKRD30AQ9BXX3 1397 aa23.62■■□□□ 1.37
NUP50-219ENST00000497960 EIF2AK4Q9P2K8 1649 aaKnown RBP23.61■■□□□ 1.37
NUP50-219ENST00000497960 RNF17Q9BXT8 1623 aaKnown RBP23.59■■□□□ 1.37
NUP50-219ENST00000497960 ERBINQ96RT1 1412 aa23.59■■□□□ 1.37
NUP50-219ENST00000497960 PZPP20742 1482 aa23.58■■□□□ 1.37
NUP50-219ENST00000497960 FBXO31Q5XUX0 539 aaPredicted RBP23.58■■□□□ 1.37
NUP50-219ENST00000497960 TNRQ92752 1358 aa23.56■■□□□ 1.36
NUP50-219ENST00000497960 ILDR1Q86SU0 546 aaPredicted RBP23.56■■□□□ 1.36
NUP50-219ENST00000497960 PPARGC1BQ86YN6 1023 aaKnown RBP23.56■■□□□ 1.36
NUP50-219ENST00000497960 MYO3AQ8NEV4 1616 aa23.55■■□□□ 1.36
NUP50-219ENST00000497960 NCOA1Q15788 1441 aa23.54■■□□□ 1.36
NUP50-219ENST00000497960 ABCC3O15438 1527 aa23.54■■□□□ 1.36
NUP50-219ENST00000497960 STRCQ7RTU9 1775 aa23.53■■□□□ 1.36
NUP50-219ENST00000497960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.52■■□□□ 1.361e-6■■■□□ 18.9
NUP50-219ENST00000497960 CEP170BQ9Y4F5 1589 aaPredicted RBP23.52■■□□□ 1.36
NUP50-219ENST00000497960 CAMSAP1Q5T5Y3 1602 aa23.51■■□□□ 1.35
NUP50-219ENST00000497960 ZNF142P52746 1687 aaPredicted RBP23.51■■□□□ 1.35
NUP50-219ENST00000497960 ZC3H13Q5T200 1668 aaKnown RBP23.51■■□□□ 1.35
NUP50-219ENST00000497960 PTPRTO14522 1441 aa23.5■■□□□ 1.35
NUP50-219ENST00000497960 A2ML1A8K2U0 1454 aa23.5■■□□□ 1.35
NUP50-219ENST00000497960 ADGRL2O95490 1459 aa23.5■■□□□ 1.35
NUP50-219ENST00000497960 MROH1Q8NDA8 1641 aa23.5■■□□□ 1.35
NUP50-219ENST00000497960 KANK1Q14678 1352 aa23.5■■□□□ 1.35
NUP50-219ENST00000497960 PKD2Q13563 968 aa23.47■■□□□ 1.35
NUP50-219ENST00000497960 PRDM15P57071 1507 aaPredicted RBP23.46■■□□□ 1.35
NUP50-219ENST00000497960 PLA2R1Q13018 1463 aa23.46■■□□□ 1.35
NUP50-219ENST00000497960 NCKAP5LQ9HCH0 1330 aa23.46■■□□□ 1.35
NUP50-219ENST00000497960 FBXO41Q8TF61 875 aa23.45■■□□□ 1.34
NUP50-219ENST00000497960 NLRP1Q9C000 1473 aa23.44■■□□□ 1.34
NUP50-219ENST00000497960 ANKRD50Q9ULJ7 1429 aa23.43■■□□□ 1.34
NUP50-219ENST00000497960 CEP152O94986 1710 aa23.43■■□□□ 1.34
NUP50-219ENST00000497960 CERKQ8TCT0 537 aa23.43■■□□□ 1.34
NUP50-219ENST00000497960 THEMISQ8N1K5 641 aaPredicted RBP23.42■■□□□ 1.34
NUP50-219ENST00000497960 ERVK-7P63135 1459 aa23.42■■□□□ 1.34
NUP50-219ENST00000497960 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.41■■□□□ 1.34
NUP50-219ENST00000497960 DEPDC5O75140 1603 aa23.41■■□□□ 1.34
NUP50-219ENST00000497960 ITGAEP38570 1179 aa23.41■■□□□ 1.34
NUP50-219ENST00000497960 ARHGAP31Q2M1Z3 1444 aa23.41■■□□□ 1.34
NUP50-219ENST00000497960 SPATA31D1Q6ZQQ2 1576 aa23.4■■□□□ 1.34
NUP50-219ENST00000497960 ROCK1Q13464 1354 aa23.39■■□□□ 1.33
NUP50-219ENST00000497960 CFAP65Q6ZU64 1925 aaKnown RBP23.37■■□□□ 1.33
NUP50-219ENST00000497960 UGGT1Q9NYU2 1555 aa23.36■■□□□ 1.33
NUP50-219ENST00000497960 ANKLE2Q86XL3 938 aa23.36■■□□□ 1.33
NUP50-219ENST00000497960 LMTK2Q8IWU2 1503 aa23.34■■□□□ 1.33
NUP50-219ENST00000497960 VWDEQ8N2E2 1590 aa23.34■■□□□ 1.33
NUP50-219ENST00000497960 RRBP1Q9P2E9 1410 aaKnown RBP23.31■■□□□ 1.32
NUP50-219ENST00000497960 STAG3Q9UJ98 1225 aa23.27■■□□□ 1.32
NUP50-219ENST00000497960 ZNF335Q9H4Z2 1342 aaPredicted RBP23.27■■□□□ 1.32
NUP50-219ENST00000497960 EFCAB6Q5THR3 1501 aa23.26■■□□□ 1.31
NUP50-219ENST00000497960 POLR1AO95602 1720 aaPredicted RBP23.25■■□□□ 1.31
NUP50-219ENST00000497960 LTBP4Q8N2S1 1624 aa23.25■■□□□ 1.31
NUP50-219ENST00000497960 NPHP4O75161 1426 aaPredicted RBP23.23■■□□□ 1.31
NUP50-219ENST00000497960 RPRD2Q5VT52 1461 aaKnown RBP23.23■■□□□ 1.31
NUP50-219ENST00000497960 NEURL4Q96JN8 1562 aa23.23■■□□□ 1.31
NUP50-219ENST00000497960 IDI1Q13907 227 aa23.22■■□□□ 1.31
NUP50-219ENST00000497960 NOS1P29475 1434 aa23.22■■□□□ 1.31
NUP50-219ENST00000497960 UNC13BO14795 1591 aa23.22■■□□□ 1.31
NUP50-219ENST00000497960 SLC52A1Q9NWF4 448 aa23.21■■□□□ 1.31
NUP50-219ENST00000497960 UBR1Q8IWV7 1749 aa23.21■■□□□ 1.31
NUP50-219ENST00000497960 MED14O60244 1454 aa23.2■■□□□ 1.3
NUP50-219ENST00000497960 NUP155O75694 1391 aa23.2■■□□□ 1.3
NUP50-219ENST00000497960 TET3O43151 1660 aa23.19■■□□□ 1.3
NUP50-219ENST00000497960 TXNDC2Q86VQ3 553 aa23.19■■□□□ 1.3
NUP50-219ENST00000497960 EID1Q9Y6B2 187 aa23.19■■□□□ 1.3
NUP50-219ENST00000497960 IQSEC2Q5JU85 1478 aa23.17■■□□□ 1.3
NUP50-219ENST00000497960 PIK3C2BO00750 1634 aa23.17■■□□□ 1.3
NUP50-219ENST00000497960 SYNMO15061 1565 aa23.17■■□□□ 1.3
NUP50-219ENST00000497960 SCAF11Q99590 1463 aaKnown RBP23.16■■□□□ 1.3
NUP50-219ENST00000497960 TMEM2Q9UHN6 1383 aa23.15■■□□□ 1.3
NUP50-219ENST00000497960 SLIT1O75093 1534 aa23.15■■□□□ 1.3
NUP50-219ENST00000497960 LTKP29376 864 aa23.15■■□□□ 1.3
NUP50-219ENST00000497960 ARHGAP23Q9P227 1491 aa23.15■■□□□ 1.3
NUP50-219ENST00000497960 GCC2Q8IWJ2 1684 aa23.14■■□□□ 1.29
NUP50-219ENST00000497960 IQGAP3Q86VI3 1631 aa23.13■■□□□ 1.29
NUP50-219ENST00000497960 IQGAP1P46940 1657 aa23.13■■□□□ 1.29
NUP50-219ENST00000497960 KDM5AP29375 1690 aaKnown RBP23.11■■□□□ 1.29
NUP50-219ENST00000497960 NAIPQ13075 1403 aa23.1■■□□□ 1.29
NUP50-219ENST00000497960 CPS1P31327 1500 aa23.09■■□□□ 1.29
NUP50-219ENST00000497960 ADGRB3O60242 1522 aa23.08■■□□□ 1.29
NUP50-219ENST00000497960 E9PCH4 1651 aa23.07■■□□□ 1.28
NUP50-219ENST00000497960 CHGAP10645 457 aaKnown RBP23.06■■□□□ 1.28
NUP50-219ENST00000497960 HFM1A2PYH4 1435 aa23.06■■□□□ 1.28
NUP50-219ENST00000497960 UBAP1LF5GYI3 381 aa23.05■■□□□ 1.28
NUP50-219ENST00000497960 HDGFP51858 240 aaKnown RBP23.05■■□□□ 1.28
NUP50-219ENST00000497960 TRIM52Q96A61 297 aa23.03■■□□□ 1.28
NUP50-219ENST00000497960 BCANQ96GW7 911 aa23.01■■□□□ 1.27
NUP50-219ENST00000497960 PPP1R15AO75807 674 aaPredicted RBP23■■□□□ 1.27
NUP50-219ENST00000497960 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.98■■□□□ 1.27
NUP50-219ENST00000497960 RIMS2Q9UQ26 1411 aa22.98■■□□□ 1.27
NUP50-219ENST00000497960 TMEM131LA2VDJ0 1609 aa22.97■■□□□ 1.27
NUP50-219ENST00000497960 TOM1O60784 492 aa22.97■■□□□ 1.27
NUP50-219ENST00000497960 SLC26A8Q96RN1 970 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms