RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 ADGBQ8N7X0 1667 aa17.49■□□□□ 0.39
ERCC8-208ENST00000497892 TCOF1Q13428 1488 aaKnown RBP17.49■□□□□ 0.39
ERCC8-208ENST00000497892 PLXNC1O60486 1568 aa17.49■□□□□ 0.39
ERCC8-208ENST00000497892 RTEL1-TNFRSF6BF6WH68 1400 aa17.48■□□□□ 0.39
ERCC8-208ENST00000497892 AGLP35573 1532 aa17.48■□□□□ 0.39
ERCC8-208ENST00000497892 MADDQ8WXG6 1647 aa17.48■□□□□ 0.39
ERCC8-208ENST00000497892 MYT1LQ9UL68 1186 aa17.48■□□□□ 0.39
ERCC8-208ENST00000497892 CROCC2H7BZ55 1655 aa17.48■□□□□ 0.39
ERCC8-208ENST00000497892 ARID4BQ4LE39 1312 aaPredicted RBP17.47■□□□□ 0.39
ERCC8-208ENST00000497892 RSPH4AQ5TD94 716 aa17.47■□□□□ 0.39
ERCC8-208ENST00000497892 MAST1Q9Y2H9 1570 aa17.47■□□□□ 0.39
ERCC8-208ENST00000497892 DNMT1P26358 1616 aaKnown RBP17.44■□□□□ 0.38
ERCC8-208ENST00000497892 FER1L4A9Z1Z3 1794 aa17.44■□□□□ 0.38
ERCC8-208ENST00000497892 A2MP01023 1474 aa17.44■□□□□ 0.38
ERCC8-208ENST00000497892 SHANK2Q9UPX8 1470 aa17.43■□□□□ 0.38
ERCC8-208ENST00000497892 RIMS1Q86UR5 1692 aaKnown RBP17.42■□□□□ 0.38
ERCC8-208ENST00000497892 PTPRMP28827 1452 aa17.4■□□□□ 0.38
ERCC8-208ENST00000497892 ABCC5O15440 1437 aa17.39■□□□□ 0.38
ERCC8-208ENST00000497892 DAPK1P53355 1430 aa17.39■□□□□ 0.38
ERCC8-208ENST00000497892 TSPY4P0CV99 314 aa17.37■□□□□ 0.37
ERCC8-208ENST00000497892 TSPY10P0CW01 314 aa17.37■□□□□ 0.37
ERCC8-208ENST00000497892 MLECQ14165 292 aa17.36■□□□□ 0.37
ERCC8-208ENST00000497892 PPARGC1BQ86YN6 1023 aaKnown RBP17.35■□□□□ 0.37
ERCC8-208ENST00000497892 DHX29Q7Z478 1369 aaKnown RBP17.35■□□□□ 0.37
ERCC8-208ENST00000497892 EIF2AK4Q9P2K8 1649 aaKnown RBP17.33■□□□□ 0.37
ERCC8-208ENST00000497892 DUOX2Q9NRD8 1548 aa17.31■□□□□ 0.36
ERCC8-208ENST00000497892 FAM50AQ14320 339 aaKnown RBP17.31■□□□□ 0.36
ERCC8-208ENST00000497892 MROH2AA6NES4 1674 aa17.31■□□□□ 0.36
ERCC8-208ENST00000497892 ADGRL2O95490 1459 aa17.31■□□□□ 0.36
ERCC8-208ENST00000497892 RNF17Q9BXT8 1623 aaKnown RBP17.3■□□□□ 0.36
ERCC8-208ENST00000497892 CNTLNQ9NXG0 1405 aa17.3■□□□□ 0.36
ERCC8-208ENST00000497892 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.29■□□□□ 0.36
ERCC8-208ENST00000497892 C3P01024 1663 aa17.29■□□□□ 0.36
ERCC8-208ENST00000497892 RRBP1Q9P2E9 1410 aaKnown RBP17.29■□□□□ 0.36
ERCC8-208ENST00000497892 KIF15Q9NS87 1388 aa17.28■□□□□ 0.36
ERCC8-208ENST00000497892 FAM135AQ9P2D6 1515 aa17.28■□□□□ 0.36
ERCC8-208ENST00000497892 CLTCQ00610 1675 aaKnown RBP17.28■□□□□ 0.36
ERCC8-208ENST00000497892 AKT1S1Q96B36 256 aa17.27■□□□□ 0.36
ERCC8-208ENST00000497892 ERBINQ96RT1 1412 aa17.27■□□□□ 0.35
ERCC8-208ENST00000497892 NCOA1Q15788 1441 aa17.26■□□□□ 0.35
ERCC8-208ENST00000497892 ANKRD30AQ9BXX3 1397 aa17.26■□□□□ 0.35
ERCC8-208ENST00000497892 MROH1Q8NDA8 1641 aa17.25■□□□□ 0.35
ERCC8-208ENST00000497892 PTPRKQ15262 1439 aa17.24■□□□□ 0.35
ERCC8-208ENST00000497892 KIF3BO15066 747 aa17.24■□□□□ 0.35
ERCC8-208ENST00000497892 KDM5DQ9BY66 1539 aa17.24■□□□□ 0.35
ERCC8-208ENST00000497892 DEPDC5O75140 1603 aa17.24■□□□□ 0.35
ERCC8-208ENST00000497892 ZC3H13Q5T200 1668 aaKnown RBP17.23■□□□□ 0.35
ERCC8-208ENST00000497892 GGT6Q6P531 493 aa17.23■□□□□ 0.35
ERCC8-208ENST00000497892 CHRDL2Q6WN34 429 aa17.23■□□□□ 0.35
ERCC8-208ENST00000497892 ESF1Q9H501 851 aaKnown RBP17.23■□□□□ 0.35
ERCC8-208ENST00000497892 PRDM15P57071 1507 aaPredicted RBP17.22■□□□□ 0.35
ERCC8-208ENST00000497892 CHIC2Q9UKJ5 165 aa17.22■□□□□ 0.35
ERCC8-208ENST00000497892 PREX1Q8TCU6 1659 aa17.21■□□□□ 0.35
ERCC8-208ENST00000497892 RRP7BPQ9NSQ0 103 aa17.21■□□□□ 0.35
ERCC8-208ENST00000497892 ROCK1Q13464 1354 aa17.2■□□□□ 0.34
ERCC8-208ENST00000497892 LMTK3Q96Q04 1460 aa17.19■□□□□ 0.34
ERCC8-208ENST00000497892 ABCC3O15438 1527 aa17.18■□□□□ 0.34
ERCC8-208ENST00000497892 CEBPAP49715 358 aaPredicted RBP17.18■□□□□ 0.34
ERCC8-208ENST00000497892 ZMYM3Q14202 1370 aa17.17■□□□□ 0.34
ERCC8-208ENST00000497892 CEP152O94986 1710 aa17.17■□□□□ 0.34
ERCC8-208ENST00000497892 NPATQ14207 1427 aa17.17■□□□□ 0.34
ERCC8-208ENST00000497892 SETD1BQ9UPS6 1966 aaKnown RBP17.16■□□□□ 0.34
ERCC8-208ENST00000497892 ANKRD50Q9ULJ7 1429 aa17.15■□□□□ 0.34
ERCC8-208ENST00000497892 CAMSAP1Q5T5Y3 1602 aa17.15■□□□□ 0.34
ERCC8-208ENST00000497892 PZPP20742 1482 aa17.14■□□□□ 0.33
ERCC8-208ENST00000497892 WASHC2CQ9Y4E1 1318 aa17.14■□□□□ 0.33
ERCC8-208ENST00000497892 VWDEQ8N2E2 1590 aa17.14■□□□□ 0.33
ERCC8-208ENST00000497892 ITGAEP38570 1179 aa17.13■□□□□ 0.33
ERCC8-208ENST00000497892 UNC13BO14795 1591 aa17.13■□□□□ 0.33
ERCC8-208ENST00000497892 MYO3AQ8NEV4 1616 aa17.12■□□□□ 0.33
ERCC8-208ENST00000497892 GCC2Q8IWJ2 1684 aa17.12■□□□□ 0.33
ERCC8-208ENST00000497892 REM2Q8IYK8 340 aaPredicted RBP17.11■□□□□ 0.33
ERCC8-208ENST00000497892 UHRF1BP1Q6BDS2 1440 aa17.11■□□□□ 0.33
ERCC8-208ENST00000497892 ZNF142P52746 1687 aaPredicted RBP17.1■□□□□ 0.33
ERCC8-208ENST00000497892 LMTK2Q8IWU2 1503 aa17.1■□□□□ 0.33
ERCC8-208ENST00000497892 KANK1Q14678 1352 aa17.08■□□□□ 0.32
ERCC8-208ENST00000497892 SPATA31D1Q6ZQQ2 1576 aa17.06■□□□□ 0.32
ERCC8-208ENST00000497892 EFCAB6Q5THR3 1501 aa17.06■□□□□ 0.32
ERCC8-208ENST00000497892 ARHGAP31Q2M1Z3 1444 aa17.06■□□□□ 0.32
ERCC8-208ENST00000497892 MKRN4PQ13434 485 aaPredicted RBP17.06■□□□□ 0.32
ERCC8-208ENST00000497892 CEP170BQ9Y4F5 1589 aaPredicted RBP17.06■□□□□ 0.32
ERCC8-208ENST00000497892 ERVK-7P63135 1459 aa17.05■□□□□ 0.32
ERCC8-208ENST00000497892 HFM1A2PYH4 1435 aa17.04■□□□□ 0.32
ERCC8-208ENST00000497892 NAIPQ13075 1403 aa17.04■□□□□ 0.32
ERCC8-208ENST00000497892 TET3O43151 1660 aa17.04■□□□□ 0.32
ERCC8-208ENST00000497892 IQGAP3Q86VI3 1631 aa17.04■□□□□ 0.32
ERCC8-208ENST00000497892 TNRQ92752 1358 aa17.02■□□□□ 0.32
ERCC8-208ENST00000497892 SPDYE2BA6NHP3 402 aa17.02■□□□□ 0.32
ERCC8-208ENST00000497892 SPDYE6P0CI01 402 aa17.02■□□□□ 0.32
ERCC8-208ENST00000497892 SPDYE2Q495Y8 402 aa17.02■□□□□ 0.32
ERCC8-208ENST00000497892 FBXO31Q5XUX0 539 aaPredicted RBP17.02■□□□□ 0.32
ERCC8-208ENST00000497892 HSPA2P54652 639 aa17.01■□□□□ 0.31
ERCC8-208ENST00000497892 A2ML1A8K2U0 1454 aa17■□□□□ 0.31
ERCC8-208ENST00000497892 NLRP1Q9C000 1473 aa17■□□□□ 0.31
ERCC8-208ENST00000497892 CFAP65Q6ZU64 1925 aaKnown RBP17■□□□□ 0.31
ERCC8-208ENST00000497892 RPRD2Q5VT52 1461 aaKnown RBP16.99■□□□□ 0.31
ERCC8-208ENST00000497892 STRCQ7RTU9 1775 aa16.98■□□□□ 0.31
ERCC8-208ENST00000497892 E9PCH4 1651 aa16.97■□□□□ 0.31
ERCC8-208ENST00000497892 SYNMO15061 1565 aa16.96■□□□□ 0.31
ERCC8-208ENST00000497892 PLA2R1Q13018 1463 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms