RNA–Protein interactions for RNA: ENST00000497886.5

TSC2-216, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 3,248 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-216ENST00000497886 RTL5Q5HYW3 569 aaPredicted RBP18.1■□□□□ 0.49
TSC2-216ENST00000497886 KTN1Q86UP2 1357 aaKnown RBP18.09■□□□□ 0.49
TSC2-216ENST00000497886 RALBP1Q15311 655 aa18.08■□□□□ 0.49
TSC2-216ENST00000497886 CEP170Q5SW79 1584 aa18.08■□□□□ 0.48
TSC2-216ENST00000497886 NLRP13Q86W25 1043 aa18.08■□□□□ 0.48
TSC2-216ENST00000497886 KDM5CP41229 1560 aa18.07■□□□□ 0.48
TSC2-216ENST00000497886 CCDC144AA2RUR9 1427 aa18.07■□□□□ 0.48
TSC2-216ENST00000497886 IPO9Q96P70 1041 aaKnown RBP18.07■□□□□ 0.48
TSC2-216ENST00000497886 MBD5Q9P267 1494 aa18.06■□□□□ 0.48
TSC2-216ENST00000497886 SENP3Q9H4L4 574 aaPredicted RBP18.06■□□□□ 0.48
TSC2-216ENST00000497886 ATP10BO94823 1461 aa18.05■□□□□ 0.48
TSC2-216ENST00000497886 MAGI1Q96QZ7 1491 aaPredicted RBP18.05■□□□□ 0.48
TSC2-216ENST00000497886 ITSN2Q9NZM3 1697 aa18.04■□□□□ 0.48
TSC2-216ENST00000497886 CRBNQ96SW2 442 aa18.03■□□□□ 0.48
TSC2-216ENST00000497886 RALGAPBQ86X10 1494 aa18.03■□□□□ 0.48
TSC2-216ENST00000497886 BRD4O60885 1362 aaPredicted RBP18.02■□□□□ 0.47
TSC2-216ENST00000497886 PTPRGP23470 1445 aa18.02■□□□□ 0.47
TSC2-216ENST00000497886 DISP3Q9P2K9 1392 aa18.01■□□□□ 0.47
TSC2-216ENST00000497886 SYNJ2O15056 1496 aa18.01■□□□□ 0.47
TSC2-216ENST00000497886 ADGBQ8N7X0 1667 aa18.01■□□□□ 0.47
TSC2-216ENST00000497886 C20orf194Q5TEA3 1177 aa18.01■□□□□ 0.47
TSC2-216ENST00000497886 CCDC146Q8IYE0 955 aa18.01■□□□□ 0.47
TSC2-216ENST00000497886 ARID4BQ4LE39 1312 aaPredicted RBP18■□□□□ 0.47
TSC2-216ENST00000497886 PDE4AP27815 886 aa17.99■□□□□ 0.47
TSC2-216ENST00000497886 SLC4A3P48751 1232 aa17.99■□□□□ 0.47
TSC2-216ENST00000497886 ADAMTS8Q9UP79 889 aa17.99■□□□□ 0.47
TSC2-216ENST00000497886 ADGRL2O95490 1459 aa17.99■□□□□ 0.47
TSC2-216ENST00000497886 RNF123Q5XPI4 1314 aa17.98■□□□□ 0.47
TSC2-216ENST00000497886 TMF1P82094 1093 aa17.98■□□□□ 0.47
TSC2-216ENST00000497886 ANO8Q9HCE9 1232 aaPredicted RBP17.98■□□□□ 0.47
TSC2-216ENST00000497886 POLR1AO95602 1720 aaPredicted RBP17.97■□□□□ 0.47
TSC2-216ENST00000497886 WDR43Q15061 677 aaKnown RBP eCLIP17.97■□□□□ 0.47
TSC2-216ENST00000497886 CDC42BPAQ5VT25 1732 aa17.96■□□□□ 0.47
TSC2-216ENST00000497886 KNSTRNQ9Y448 316 aa17.96■□□□□ 0.47
TSC2-216ENST00000497886 PER1O15534 1290 aaPredicted RBP17.95■□□□□ 0.46
TSC2-216ENST00000497886 RTN4Q9NQC3 1192 aaKnown RBP17.95■□□□□ 0.46
TSC2-216ENST00000497886 LRPPRCP42704 1394 aaKnown RBP17.95■□□□□ 0.46
TSC2-216ENST00000497886 UHRF1BP1Q6BDS2 1440 aa17.94■□□□□ 0.46
TSC2-216ENST00000497886 RGS3P49796 1198 aa17.94■□□□□ 0.46
TSC2-216ENST00000497886 TNNT2P45379 298 aaPredicted RBP17.93■□□□□ 0.46
TSC2-216ENST00000497886 NEFMP07197 916 aa17.93■□□□□ 0.46
TSC2-216ENST00000497886 FAM135AQ9P2D6 1515 aa17.93■□□□□ 0.46
TSC2-216ENST00000497886 ARHGAP5Q13017 1502 aa17.93■□□□□ 0.46
TSC2-216ENST00000497886 TESK2Q96S53 571 aa17.92■□□□□ 0.46
TSC2-216ENST00000497886 ABCC10Q5T3U5 1492 aa17.92■□□□□ 0.46
TSC2-216ENST00000497886 PLEKHH2Q8IVE3 1493 aa17.92■□□□□ 0.46
TSC2-216ENST00000497886 CROCC2H7BZ55 1655 aa17.92■□□□□ 0.46
TSC2-216ENST00000497886 CHGAP10645 457 aaKnown RBP17.91■□□□□ 0.46
TSC2-216ENST00000497886 PRAG1Q86YV5 1406 aa17.91■□□□□ 0.46
TSC2-216ENST00000497886 NEUROD2Q15784 382 aa17.91■□□□□ 0.46
TSC2-216ENST00000497886 CCDC141Q6ZP82 1450 aa17.9■□□□□ 0.46
TSC2-216ENST00000497886 SYCP2Q9BX26 1530 aa17.9■□□□□ 0.46
TSC2-216ENST00000497886 TCERG1O14776 1098 aaKnown RBP17.89■□□□□ 0.46
TSC2-216ENST00000497886 PARD3Q8TEW0 1356 aa17.89■□□□□ 0.45
TSC2-216ENST00000497886 AFAP1Q8N556 730 aa17.89■□□□□ 0.45
TSC2-216ENST00000497886 ERBINQ96RT1 1412 aa17.87■□□□□ 0.45
TSC2-216ENST00000497886 A2MP01023 1474 aa17.87■□□□□ 0.45
TSC2-216ENST00000497886 DAXXQ9UER7 740 aaPredicted RBP17.87■□□□□ 0.45
TSC2-216ENST00000497886 PDE3BQ13370 1112 aa17.86■□□□□ 0.45
TSC2-216ENST00000497886 BACH2Q9BYV9 841 aa17.86■□□□□ 0.45
TSC2-216ENST00000497886 NUP160Q12769 1436 aa17.85■□□□□ 0.45
TSC2-216ENST00000497886 ARHGEF12Q9NZN5 1544 aa17.85■□□□□ 0.45
TSC2-216ENST00000497886 PPP2R1AP30153 589 aa17.84■□□□□ 0.45
TSC2-216ENST00000497886 PLA2R1Q13018 1463 aa17.84■□□□□ 0.45
TSC2-216ENST00000497886 ABCA8O94911 1581 aa17.83■□□□□ 0.45
TSC2-216ENST00000497886 SAMD9LQ8IVG5 1584 aa17.83■□□□□ 0.45
TSC2-216ENST00000497886 KDM5DQ9BY66 1539 aa17.83■□□□□ 0.44
TSC2-216ENST00000497886 ADCY10Q96PN6 1610 aa17.83■□□□□ 0.44
TSC2-216ENST00000497886 APAF1O14727 1248 aa17.83■□□□□ 0.44
TSC2-216ENST00000497886 SHANK2Q9UPX8 1470 aa17.82■□□□□ 0.44
TSC2-216ENST00000497886 CANXP27824 592 aaKnown RBP17.81■□□□□ 0.44
TSC2-216ENST00000497886 RSPH4AQ5TD94 716 aa17.8■□□□□ 0.44
TSC2-216ENST00000497886 RRP7AQ9Y3A4 280 aaKnown RBP17.79■□□□□ 0.44
TSC2-216ENST00000497886 PLEKHH1Q9ULM0 1364 aa17.79■□□□□ 0.44
TSC2-216ENST00000497886 BCAR3O75815 825 aa17.79■□□□□ 0.44
TSC2-216ENST00000497886 GOLGA2Q08379 1002 aa17.79■□□□□ 0.44
TSC2-216ENST00000497886 KIF3BO15066 747 aa17.79■□□□□ 0.44
TSC2-216ENST00000497886 CFAP70Q5T0N1 1121 aa17.78■□□□□ 0.44
TSC2-216ENST00000497886 NUTM2DQ5VT03 806 aaPredicted RBP17.78■□□□□ 0.44
TSC2-216ENST00000497886 EFCAB2Q5VUJ9 269 aa17.78■□□□□ 0.44
TSC2-216ENST00000497886 IL27Q8NEV9 243 aa17.78■□□□□ 0.44
TSC2-216ENST00000497886 SPINK5Q9NQ38 1064 aaPredicted RBP17.78■□□□□ 0.44
TSC2-216ENST00000497886 FRAT1Q92837 279 aaPredicted RBP17.77■□□□□ 0.44
TSC2-216ENST00000497886 COL17A1Q9UMD9 1497 aaPredicted RBP17.77■□□□□ 0.44
TSC2-216ENST00000497886 SPAG9O60271 1321 aaKnown RBP17.77■□□□□ 0.44
TSC2-216ENST00000497886 CDC42BPBQ9Y5S2 1711 aa17.76■□□□□ 0.43
TSC2-216ENST00000497886 TRPM1Q7Z4N2 1603 aa17.75■□□□□ 0.43
TSC2-216ENST00000497886 TTC37Q6PGP7 1564 aa17.75■□□□□ 0.43
TSC2-216ENST00000497886 DUSP27Q5VZP5 1158 aa17.75■□□□□ 0.43
TSC2-216ENST00000497886 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.75■□□□□ 0.43
TSC2-216ENST00000497886 BCL2L13Q9BXK5 485 aa17.74■□□□□ 0.43
TSC2-216ENST00000497886 DMRT2Q9Y5R5 561 aa17.73■□□□□ 0.43
TSC2-216ENST00000497886 AMER1Q5JTC6 1135 aaPredicted RBP17.72■□□□□ 0.43
TSC2-216ENST00000497886 MAGI2Q86UL8 1455 aa17.72■□□□□ 0.43
TSC2-216ENST00000497886 SAFB2Q14151 953 aaKnown RBP eCLIP17.72■□□□□ 0.43
TSC2-216ENST00000497886 TRAPPC8Q9Y2L5 1435 aa17.71■□□□□ 0.43
TSC2-216ENST00000497886 ERCC6L2Q5T890 1561 aa17.71■□□□□ 0.43
TSC2-216ENST00000497886 TRAK1Q9UPV9 953 aa17.71■□□□□ 0.43
TSC2-216ENST00000497886 MS4A1P11836 297 aa17.7■□□□□ 0.42
TSC2-216ENST00000497886 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms