RNA–Protein interactions for RNA: ENST00000497850.5

NXF3-207, Transcript of nuclear RNA export factor 3, humanhuman

TSL 2

Gene NXF3, Length 2,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-207ENST00000497850 DHX29Q7Z478 1369 aaKnown RBP17.61■□□□□ 0.41
NXF3-207ENST00000497850 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.6■□□□□ 0.41
NXF3-207ENST00000497850 SALL2Q9Y467 1007 aaPredicted RBP17.6■□□□□ 0.41
NXF3-207ENST00000497850 FAM135AQ9P2D6 1515 aa17.59■□□□□ 0.41
NXF3-207ENST00000497850 RALGAPBQ86X10 1494 aa17.59■□□□□ 0.41
NXF3-207ENST00000497850 RGL3Q3MIN7 710 aa17.59■□□□□ 0.41
NXF3-207ENST00000497850 UHRF1BP1Q6BDS2 1440 aa17.58■□□□□ 0.4
NXF3-207ENST00000497850 ST20-MTHFSA0A0A6YYL1 179 aa17.58■□□□□ 0.4
NXF3-207ENST00000497850 NOP58Q9Y2X3 529 aaKnown RBP17.58■□□□□ 0.4
NXF3-207ENST00000497850 SHROOM2Q13796 1616 aa17.57■□□□□ 0.4
NXF3-207ENST00000497850 ARHGEF12Q9NZN5 1544 aa17.55■□□□□ 0.4
NXF3-207ENST00000497850 NBR1Q14596 966 aa17.54■□□□□ 0.4
NXF3-207ENST00000497850 MYO5CQ9NQX4 1742 aa17.54■□□□□ 0.4
NXF3-207ENST00000497850 PPP4R2Q9NY27 417 aa17.54■□□□□ 0.4
NXF3-207ENST00000497850 ROCK2O75116 1388 aaKnown RBP17.53■□□□□ 0.4
NXF3-207ENST00000497850 ABCC2Q92887 1545 aa17.53■□□□□ 0.4
NXF3-207ENST00000497850 ZBED9Q6R2W3 1325 aa17.53■□□□□ 0.4
NXF3-207ENST00000497850 PAK3O75914 559 aaPredicted RBP17.52■□□□□ 0.4
NXF3-207ENST00000497850 PLEKHH2Q8IVE3 1493 aa17.52■□□□□ 0.39
NXF3-207ENST00000497850 CCDC144AA2RUR9 1427 aa17.52■□□□□ 0.39
NXF3-207ENST00000497850 RSPH4AQ5TD94 716 aa17.51■□□□□ 0.39
NXF3-207ENST00000497850 NBPF1Q3BBV0 1214 aa17.5■□□□□ 0.39
NXF3-207ENST00000497850 PLA2R1Q13018 1463 aa17.48■□□□□ 0.39
NXF3-207ENST00000497850 UNC13BO14795 1591 aa17.48■□□□□ 0.39
NXF3-207ENST00000497850 ZCCHC11Q5TAX3 1644 aaKnown RBP17.47■□□□□ 0.39
NXF3-207ENST00000497850 MAST1Q9Y2H9 1570 aa17.47■□□□□ 0.39
NXF3-207ENST00000497850 ARID4BQ4LE39 1312 aaPredicted RBP17.46■□□□□ 0.39
NXF3-207ENST00000497850 TRPM1Q7Z4N2 1603 aa17.46■□□□□ 0.39
NXF3-207ENST00000497850 PRAG1Q86YV5 1406 aa17.46■□□□□ 0.38
NXF3-207ENST00000497850 TMC1Q8TDI8 760 aa17.45■□□□□ 0.38
NXF3-207ENST00000497850 A2MP01023 1474 aa17.44■□□□□ 0.38
NXF3-207ENST00000497850 CCDC136Q96JN2 1154 aa17.44■□□□□ 0.38
NXF3-207ENST00000497850 PLXNC1O60486 1568 aa17.43■□□□□ 0.38
NXF3-207ENST00000497850 IL27Q8NEV9 243 aa17.43■□□□□ 0.38
NXF3-207ENST00000497850 B4GALNT3Q6L9W6 998 aa17.42■□□□□ 0.38
NXF3-207ENST00000497850 IQGAP3Q86VI3 1631 aa17.42■□□□□ 0.38
NXF3-207ENST00000497850 TRAPPC8Q9Y2L5 1435 aa17.42■□□□□ 0.38
NXF3-207ENST00000497850 PNISRQ8TF01 805 aaKnown RBP17.41■□□□□ 0.38
NXF3-207ENST00000497850 PLCH2O75038 1416 aa17.41■□□□□ 0.38
NXF3-207ENST00000497850 EFCAB2Q5VUJ9 269 aa17.41■□□□□ 0.38
NXF3-207ENST00000497850 DUOX2Q9NRD8 1548 aa17.4■□□□□ 0.38
NXF3-207ENST00000497850 E9PCH4 1651 aa17.4■□□□□ 0.38
NXF3-207ENST00000497850 AFAP1Q8N556 730 aa17.39■□□□□ 0.37
NXF3-207ENST00000497850 CLASP1Q7Z460 1538 aa17.39■□□□□ 0.37
NXF3-207ENST00000497850 UBE2Q2Q8WVN8 375 aa17.38■□□□□ 0.37
NXF3-207ENST00000497850 RTL5Q5HYW3 569 aaPredicted RBP17.37■□□□□ 0.37
NXF3-207ENST00000497850 ABCC1P33527 1531 aa17.37■□□□□ 0.37
NXF3-207ENST00000497850 DISP3Q9P2K9 1392 aa17.36■□□□□ 0.37
NXF3-207ENST00000497850 MYBBP1AQ9BQG0 1328 aaKnown RBP17.36■□□□□ 0.37
NXF3-207ENST00000497850 NUDCQ9Y266 331 aa17.35■□□□□ 0.37
NXF3-207ENST00000497850 SMG6Q86US8 1419 aaKnown RBP17.35■□□□□ 0.37
NXF3-207ENST00000497850 ERBINQ96RT1 1412 aa17.35■□□□□ 0.37
NXF3-207ENST00000497850 IPO9Q96P70 1041 aaKnown RBP17.34■□□□□ 0.37
NXF3-207ENST00000497850 SPAG9O60271 1321 aaKnown RBP17.34■□□□□ 0.37
NXF3-207ENST00000497850 CC2D1BQ5T0F9 858 aaKnown RBP17.33■□□□□ 0.37
NXF3-207ENST00000497850 MAGI2Q86UL8 1455 aa17.33■□□□□ 0.36
NXF3-207ENST00000497850 RALBP1Q15311 655 aa17.32■□□□□ 0.36
NXF3-207ENST00000497850 RTN4Q9NQC3 1192 aaKnown RBP17.32■□□□□ 0.36
NXF3-207ENST00000497850 PRDM15P57071 1507 aaPredicted RBP17.32■□□□□ 0.36
NXF3-207ENST00000497850 TESK2Q96S53 571 aa17.32■□□□□ 0.36
NXF3-207ENST00000497850 UHRF1BP1LA0JNW5 1464 aa17.31■□□□□ 0.36
NXF3-207ENST00000497850 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.31■□□□□ 0.36
NXF3-207ENST00000497850 GPRASP1Q5JY77 1395 aa17.31■□□□□ 0.36
NXF3-207ENST00000497850 BRD4O60885 1362 aaPredicted RBP17.31■□□□□ 0.36
NXF3-207ENST00000497850 KTN1Q86UP2 1357 aaKnown RBP17.3■□□□□ 0.36
NXF3-207ENST00000497850 COL17A1Q9UMD9 1497 aaPredicted RBP17.3■□□□□ 0.36
NXF3-207ENST00000497850 ANP32AP39687 249 aaKnown RBP17.3■□□□□ 0.36
NXF3-207ENST00000497850 PANK3Q9H999 370 aa17.29■□□□□ 0.36
NXF3-207ENST00000497850 LRPPRCP42704 1394 aaKnown RBP17.28■□□□□ 0.36
NXF3-207ENST00000497850 PER1O15534 1290 aaPredicted RBP17.28■□□□□ 0.36
NXF3-207ENST00000497850 EIF2AK4Q9P2K8 1649 aaKnown RBP17.28■□□□□ 0.36
NXF3-207ENST00000497850 ZFYVE16Q7Z3T8 1539 aa17.27■□□□□ 0.36
NXF3-207ENST00000497850 ATP10AO60312 1499 aa17.27■□□□□ 0.35
NXF3-207ENST00000497850 PARD3Q8TEW0 1356 aa17.26■□□□□ 0.35
NXF3-207ENST00000497850 ZBTB47Q9UFB7 747 aaPredicted RBP17.26■□□□□ 0.35
NXF3-207ENST00000497850 LAMC1P11047 1609 aa17.26■□□□□ 0.35
NXF3-207ENST00000497850 NLRP13Q86W25 1043 aa17.26■□□□□ 0.35
NXF3-207ENST00000497850 TMF1P82094 1093 aa17.25■□□□□ 0.35
NXF3-207ENST00000497850 KIF3BO15066 747 aa17.23■□□□□ 0.35
NXF3-207ENST00000497850 WDR7Q9Y4E6 1490 aa17.23■□□□□ 0.35
NXF3-207ENST00000497850 CLTCL1P53675 1640 aa17.23■□□□□ 0.35
NXF3-207ENST00000497850 RNF17Q9BXT8 1623 aaKnown RBP17.23■□□□□ 0.35
NXF3-207ENST00000497850 FANCAO15360 1455 aa17.23■□□□□ 0.35
NXF3-207ENST00000497850 SPHKAPQ2M3C7 1700 aa17.22■□□□□ 0.35
NXF3-207ENST00000497850 MADDQ8WXG6 1647 aa17.22■□□□□ 0.35
NXF3-207ENST00000497850 SCAPERQ9BY12 1400 aa17.21■□□□□ 0.35
NXF3-207ENST00000497850 ATP7AQ04656 1500 aa17.21■□□□□ 0.34
NXF3-207ENST00000497850 RNF123Q5XPI4 1314 aa17.2■□□□□ 0.34
NXF3-207ENST00000497850 CEP152O94986 1710 aa17.2■□□□□ 0.34
NXF3-207ENST00000497850 WASHC2CQ9Y4E1 1318 aa17.2■□□□□ 0.34
NXF3-207ENST00000497850 TRPM2O94759 1503 aa17.2■□□□□ 0.34
NXF3-207ENST00000497850 RTEL1-TNFRSF6BF6WH68 1400 aa17.19■□□□□ 0.34
NXF3-207ENST00000497850 ABCA9Q8IUA7 1624 aa17.18■□□□□ 0.34
NXF3-207ENST00000497850 ADGRL1O94910 1474 aa17.18■□□□□ 0.34
NXF3-207ENST00000497850 CDCA7LQ96GN5 454 aa17.18■□□□□ 0.34
NXF3-207ENST00000497850 UGGT1Q9NYU2 1555 aa17.18■□□□□ 0.34
NXF3-207ENST00000497850 DEPDC5O75140 1603 aa17.17■□□□□ 0.34
NXF3-207ENST00000497850 INO80Q9ULG1 1556 aaPredicted RBP17.17■□□□□ 0.34
NXF3-207ENST00000497850 IQGAP1P46940 1657 aa17.17■□□□□ 0.34
NXF3-207ENST00000497850 TET3O43151 1660 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms