RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 UBAP1LF5GYI3 381 aa34.85■■■■□ 3.17
CLIC4-204ENST00000497755 DNMT1P26358 1616 aaKnown RBP34.84■■■■□ 3.17
CLIC4-204ENST00000497755 SOCS7O14512 581 aa34.84■■■■□ 3.17
CLIC4-204ENST00000497755 CAMSAP2Q08AD1 1489 aa34.82■■■■□ 3.16
CLIC4-204ENST00000497755 SPATA31D1Q6ZQQ2 1576 aa34.81■■■■□ 3.16
CLIC4-204ENST00000497755 TNRQ92752 1358 aa34.8■■■■□ 3.16
CLIC4-204ENST00000497755 WASHC2CQ9Y4E1 1318 aa34.79■■■■□ 3.16
CLIC4-204ENST00000497755 PZPP20742 1482 aa34.76■■■■□ 3.15
CLIC4-204ENST00000497755 KDM5DQ9BY66 1539 aa34.75■■■■□ 3.15
CLIC4-204ENST00000497755 TSPY4P0CV99 314 aa34.73■■■■□ 3.15
CLIC4-204ENST00000497755 TSPY10P0CW01 314 aa34.73■■■■□ 3.15
CLIC4-204ENST00000497755 FAM135AQ9P2D6 1515 aa34.72■■■■□ 3.15
CLIC4-204ENST00000497755 ARHGEF5Q12774 1597 aa34.7■■■■□ 3.14
CLIC4-204ENST00000497755 MIA2Q96PC5 1412 aa34.69■■■■□ 3.14
CLIC4-204ENST00000497755 NEURL4Q96JN8 1562 aa34.68■■■■□ 3.14
CLIC4-204ENST00000497755 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.66■■■■□ 3.142e-6■■□□□ 13.2
CLIC4-204ENST00000497755 ANKLE2Q86XL3 938 aa34.66■■■■□ 3.14
CLIC4-204ENST00000497755 THEMISQ8N1K5 641 aaPredicted RBP34.66■■■■□ 3.14
CLIC4-204ENST00000497755 POLR1AO95602 1720 aaPredicted RBP34.66■■■■□ 3.14
CLIC4-204ENST00000497755 LRRC9Q6ZRR7 1453 aa34.62■■■■□ 3.13
CLIC4-204ENST00000497755 SHANK2Q9UPX8 1470 aa34.62■■■■□ 3.13
CLIC4-204ENST00000497755 NLRP1Q9C000 1473 aa34.61■■■■□ 3.13
CLIC4-204ENST00000497755 CPS1P31327 1500 aa34.59■■■■□ 3.13
CLIC4-204ENST00000497755 VPS8Q8N3P4 1428 aa34.57■■■■□ 3.13
CLIC4-204ENST00000497755 LOC105371045A0A1W2PR82 267 aa34.57■■■■□ 3.12
CLIC4-204ENST00000497755 UGGT1Q9NYU2 1555 aa34.57■■■■□ 3.12
CLIC4-204ENST00000497755 KANK4Q5T7N3 995 aaPredicted RBP34.56■■■■□ 3.12
CLIC4-204ENST00000497755 TOM1O60784 492 aa34.55■■■■□ 3.12
CLIC4-204ENST00000497755 PIP4K2BP78356 416 aa34.55■■■■□ 3.12
CLIC4-204ENST00000497755 MAST1Q9Y2H9 1570 aa34.53■■■■□ 3.12
CLIC4-204ENST00000497755 MED14O60244 1454 aa34.53■■■■□ 3.12
CLIC4-204ENST00000497755 HSPA1LP34931 641 aa34.53■■■■□ 3.12
CLIC4-204ENST00000497755 SCAF1Q9H7N4 1312 aaKnown RBP34.53■■■■□ 3.12
CLIC4-204ENST00000497755 RNF17Q9BXT8 1623 aaKnown RBP34.52■■■■□ 3.12
CLIC4-204ENST00000497755 NPHP4O75161 1426 aaPredicted RBP34.52■■■■□ 3.12
CLIC4-204ENST00000497755 VWDEQ8N2E2 1590 aa34.52■■■■□ 3.12
CLIC4-204ENST00000497755 ABCC3O15438 1527 aa34.51■■■■□ 3.12
CLIC4-204ENST00000497755 DEPDC5O75140 1603 aa34.5■■■■□ 3.11
CLIC4-204ENST00000497755 MAP3K1Q13233 1512 aa34.45■■■■□ 3.1
CLIC4-204ENST00000497755 ZC3H13Q5T200 1668 aaKnown RBP34.44■■■■□ 3.1
CLIC4-204ENST00000497755 MYOM3Q5VTT5 1437 aa34.43■■■■□ 3.1
CLIC4-204ENST00000497755 ERVK-7P63135 1459 aa34.43■■■■□ 3.1
CLIC4-204ENST00000497755 EIF2AK4Q9P2K8 1649 aaKnown RBP34.43■■■■□ 3.1
CLIC4-204ENST00000497755 MROH1Q8NDA8 1641 aa34.42■■■■□ 3.1
CLIC4-204ENST00000497755 CFAP65Q6ZU64 1925 aaKnown RBP34.42■■■■□ 3.1
CLIC4-204ENST00000497755 IQGAP1P46940 1657 aa34.4■■■■□ 3.1
CLIC4-204ENST00000497755 ALKQ9UM73 1620 aa34.36■■■■□ 3.09
CLIC4-204ENST00000497755 DUOX2Q9NRD8 1548 aa34.35■■■■□ 3.09
CLIC4-204ENST00000497755 STRCP1A6NGW2 1772 aa34.34■■■■□ 3.09
CLIC4-204ENST00000497755 CEP152O94986 1710 aa34.34■■■■□ 3.09
CLIC4-204ENST00000497755 LRRC7Q96NW7 1537 aa34.3■■■■□ 3.08
CLIC4-204ENST00000497755 MED1Q15648 1581 aaPredicted RBP34.3■■■■□ 3.08
CLIC4-204ENST00000497755 UBR1Q8IWV7 1749 aa34.3■■■■□ 3.08
CLIC4-204ENST00000497755 RRP7BPQ9NSQ0 103 aa34.29■■■■□ 3.08
CLIC4-204ENST00000497755 ABCC5O15440 1437 aa34.29■■■■□ 3.08
CLIC4-204ENST00000497755 KIF15Q9NS87 1388 aa34.28■■■■□ 3.08
CLIC4-204ENST00000497755 LTKP29376 864 aa34.28■■■■□ 3.08
CLIC4-204ENST00000497755 ARHGAP31Q2M1Z3 1444 aa34.27■■■■□ 3.08
CLIC4-204ENST00000497755 TXNDC2Q86VQ3 553 aa34.25■■■■□ 3.07
CLIC4-204ENST00000497755 SCAF11Q99590 1463 aaKnown RBP34.24■■■■□ 3.07
CLIC4-204ENST00000497755 ERBINQ96RT1 1412 aa34.22■■■■□ 3.07
CLIC4-204ENST00000497755 ARHGAP23Q9P227 1491 aa34.22■■■■□ 3.07
CLIC4-204ENST00000497755 PRDM15P57071 1507 aaPredicted RBP34.22■■■■□ 3.07
CLIC4-204ENST00000497755 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.22■■■■□ 3.073e-6■■□□□ 11.6
CLIC4-204ENST00000497755 SLIT1O75093 1534 aa34.2■■■■□ 3.06
CLIC4-204ENST00000497755 SYNMO15061 1565 aa34.18■■■■□ 3.06
CLIC4-204ENST00000497755 PTPN23Q9H3S7 1636 aa34.18■■■■□ 3.06
CLIC4-204ENST00000497755 CROCC2H7BZ55 1655 aa34.17■■■■□ 3.06
CLIC4-204ENST00000497755 SENP3Q9H4L4 574 aaPredicted RBP34.16■■■■□ 3.06
CLIC4-204ENST00000497755 DAPK1P53355 1430 aa34.15■■■■□ 3.06
CLIC4-204ENST00000497755 APLP2Q06481 763 aa34.15■■■■□ 3.06
CLIC4-204ENST00000497755 EID1Q9Y6B2 187 aa34.15■■■■□ 3.06
CLIC4-204ENST00000497755 TMEM2Q9UHN6 1383 aa34.11■■■■□ 3.05
CLIC4-204ENST00000497755 CHIC2Q9UKJ5 165 aa34.1■■■■□ 3.05
CLIC4-204ENST00000497755 KANK1Q14678 1352 aa34.1■■■■□ 3.05
CLIC4-204ENST00000497755 PIK3C2BO00750 1634 aa34.09■■■■□ 3.05
CLIC4-204ENST00000497755 IDI1Q13907 227 aa34.09■■■■□ 3.05
CLIC4-204ENST00000497755 PHF23Q9BUL5 403 aaPredicted RBP34.09■■■■□ 3.05
CLIC4-204ENST00000497755 FGD6Q6ZV73 1430 aa34.09■■■■□ 3.05
CLIC4-204ENST00000497755 STAG3Q9UJ98 1225 aa34.08■■■■□ 3.05
CLIC4-204ENST00000497755 XIRP1Q702N8 1843 aaKnown RBP34.05■■■■□ 3.04
CLIC4-204ENST00000497755 ANKRD30AQ9BXX3 1397 aa34.05■■■■□ 3.04
CLIC4-204ENST00000497755 LMTK2Q8IWU2 1503 aa34.04■■■■□ 3.04
CLIC4-204ENST00000497755 EFCAB6Q5THR3 1501 aa33.99■■■■□ 3.03
CLIC4-204ENST00000497755 KDM5AP29375 1690 aaKnown RBP33.98■■■■□ 3.03
CLIC4-204ENST00000497755 KCNA6P17658 529 aa33.96■■■■□ 3.03
CLIC4-204ENST00000497755 NOS1P29475 1434 aa33.96■■■■□ 3.03
CLIC4-204ENST00000497755 SLC26A8Q96RN1 970 aa33.95■■■■□ 3.03
CLIC4-204ENST00000497755 TET3O43151 1660 aa33.93■■■■□ 3.02
CLIC4-204ENST00000497755 TMEM94Q12767 1356 aa33.93■■■■□ 3.02
CLIC4-204ENST00000497755 FAM135BQ49AJ0 1406 aa33.92■■■■□ 3.02
CLIC4-204ENST00000497755 SLC52A1Q9NWF4 448 aa33.9■■■■□ 3.02
CLIC4-204ENST00000497755 RGS17Q9UGC6 210 aaPredicted RBP33.9■■■■□ 3.02
CLIC4-204ENST00000497755 PROSER2Q86WR7 435 aaPredicted RBP33.88■■■■□ 3.01
CLIC4-204ENST00000497755 RBM33Q96EV2 1170 aaKnown RBP33.88■■■■□ 3.01
CLIC4-204ENST00000497755 ADGRL2O95490 1459 aa33.88■■■■□ 3.01
CLIC4-204ENST00000497755 ADGRB3O60242 1522 aa33.84■■■■□ 3.01
CLIC4-204ENST00000497755 FAM50AQ14320 339 aaKnown RBP33.84■■■■□ 3.01
CLIC4-204ENST00000497755 ANKRD50Q9ULJ7 1429 aa33.8■■■■□ 3
CLIC4-204ENST00000497755 BCANQ96GW7 911 aa33.8■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms