RNA–Protein interactions for RNA: ENST00000497663.1

TNRC18-210, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-210ENST00000497663 TIAM1Q13009 1591 aa24.37■■□□□ 1.49
TNRC18-210ENST00000497663 C3P01024 1663 aa24.37■■□□□ 1.49
TNRC18-210ENST00000497663 KIAA1107Q9UPP5 1409 aa24.36■■□□□ 1.49
TNRC18-210ENST00000497663 SSUH2Q9Y2M2 353 aa24.36■■□□□ 1.49
TNRC18-210ENST00000497663 ATP7AQ04656 1500 aa24.34■■□□□ 1.49
TNRC18-210ENST00000497663 INO80Q9ULG1 1556 aaPredicted RBP24.33■■□□□ 1.48
TNRC18-210ENST00000497663 STRCQ7RTU9 1775 aa24.32■■□□□ 1.48
TNRC18-210ENST00000497663 MBD5Q9P267 1494 aa24.32■■□□□ 1.48
TNRC18-210ENST00000497663 UHRF1BP1Q6BDS2 1440 aa24.31■■□□□ 1.48
TNRC18-210ENST00000497663 SUPT6HQ7KZ85 1726 aaKnown RBP24.31■■□□□ 1.48
TNRC18-210ENST00000497663 EHBP1L1Q8N3D4 1523 aa24.3■■□□□ 1.48
TNRC18-210ENST00000497663 PLEKHH2Q8IVE3 1493 aa24.29■■□□□ 1.48
TNRC18-210ENST00000497663 PLXNC1O60486 1568 aa24.29■■□□□ 1.48
TNRC18-210ENST00000497663 A2MP01023 1474 aa24.28■■□□□ 1.48
TNRC18-210ENST00000497663 CERKQ8TCT0 537 aa24.28■■□□□ 1.48
TNRC18-210ENST00000497663 ESF1Q9H501 851 aaKnown RBP24.28■■□□□ 1.48
TNRC18-210ENST00000497663 ZMYM3Q14202 1370 aa24.26■■□□□ 1.47
TNRC18-210ENST00000497663 NCOA2Q15596 1464 aa24.26■■□□□ 1.47
TNRC18-210ENST00000497663 SETD1BQ9UPS6 1966 aaKnown RBP24.24■■□□□ 1.47
TNRC18-210ENST00000497663 CNTLNQ9NXG0 1405 aa24.24■■□□□ 1.47
TNRC18-210ENST00000497663 GGT6Q6P531 493 aa24.23■■□□□ 1.47
TNRC18-210ENST00000497663 AKT1S1Q96B36 256 aa24.21■■□□□ 1.47
TNRC18-210ENST00000497663 CLTCQ00610 1675 aaKnown RBP24.21■■□□□ 1.47
TNRC18-210ENST00000497663 PROM2Q8N271 834 aa24.19■■□□□ 1.46
TNRC18-210ENST00000497663 KANK4Q5T7N3 995 aaPredicted RBP24.18■■□□□ 1.46
TNRC18-210ENST00000497663 CAMSAP2Q08AD1 1489 aa24.17■■□□□ 1.46
TNRC18-210ENST00000497663 MROH2AA6NES4 1674 aa24.16■■□□□ 1.46
TNRC18-210ENST00000497663 PTPRKQ15262 1439 aa24.16■■□□□ 1.46
TNRC18-210ENST00000497663 NCOA1Q15788 1441 aa24.16■■□□□ 1.46
TNRC18-210ENST00000497663 NPATQ14207 1427 aa24.15■■□□□ 1.46
TNRC18-210ENST00000497663 VPS8Q8N3P4 1428 aa24.15■■□□□ 1.46
TNRC18-210ENST00000497663 RTEL1-TNFRSF6BF6WH68 1400 aa24.13■■□□□ 1.45
TNRC18-210ENST00000497663 ADGBQ8N7X0 1667 aa24.13■■□□□ 1.45
TNRC18-210ENST00000497663 DHX29Q7Z478 1369 aaKnown RBP24.13■■□□□ 1.45
TNRC18-210ENST00000497663 NCKAP5LQ9HCH0 1330 aa24.12■■□□□ 1.45
TNRC18-210ENST00000497663 CCDC141Q6ZP82 1450 aa24.12■■□□□ 1.45
TNRC18-210ENST00000497663 LRRC9Q6ZRR7 1453 aa24.12■■□□□ 1.45
TNRC18-210ENST00000497663 PTPRTO14522 1441 aa24.11■■□□□ 1.45
TNRC18-210ENST00000497663 CAMSAP1Q5T5Y3 1602 aa24.11■■□□□ 1.45
TNRC18-210ENST00000497663 KIF3BO15066 747 aa24.08■■□□□ 1.45
TNRC18-210ENST00000497663 FBXO31Q5XUX0 539 aaPredicted RBP24.08■■□□□ 1.45
TNRC18-210ENST00000497663 LTBP4Q8N2S1 1624 aa24.06■■□□□ 1.44
TNRC18-210ENST00000497663 MYO3AQ8NEV4 1616 aa24.06■■□□□ 1.44
TNRC18-210ENST00000497663 CEP170BQ9Y4F5 1589 aaPredicted RBP24.02■■□□□ 1.44
TNRC18-210ENST00000497663 ARHGEF5Q12774 1597 aa24.01■■□□□ 1.43
TNRC18-210ENST00000497663 ZNF142P52746 1687 aaPredicted RBP23.99■■□□□ 1.43
TNRC18-210ENST00000497663 ZNF335Q9H4Z2 1342 aaPredicted RBP23.99■■□□□ 1.43
TNRC18-210ENST00000497663 RSPH4AQ5TD94 716 aa23.98■■□□□ 1.43
TNRC18-210ENST00000497663 TCOF1Q13428 1488 aaKnown RBP23.97■■□□□ 1.43
TNRC18-210ENST00000497663 TSPY4P0CV99 314 aa23.95■■□□□ 1.42
TNRC18-210ENST00000497663 TSPY10P0CW01 314 aa23.95■■□□□ 1.42
TNRC18-210ENST00000497663 MAP3K1Q13233 1512 aa23.94■■□□□ 1.42
TNRC18-210ENST00000497663 KDM5DQ9BY66 1539 aa23.94■■□□□ 1.42
TNRC18-210ENST00000497663 MYOM3Q5VTT5 1437 aa23.94■■□□□ 1.42
TNRC18-210ENST00000497663 WASHC2CQ9Y4E1 1318 aa23.94■■□□□ 1.42
TNRC18-210ENST00000497663 REM2Q8IYK8 340 aaPredicted RBP23.94■■□□□ 1.42
TNRC18-210ENST00000497663 DNMT1P26358 1616 aaKnown RBP23.94■■□□□ 1.42
TNRC18-210ENST00000497663 A2ML1A8K2U0 1454 aa23.94■■□□□ 1.42
TNRC18-210ENST00000497663 PLA2R1Q13018 1463 aa23.94■■□□□ 1.42
TNRC18-210ENST00000497663 TNRQ92752 1358 aa23.93■■□□□ 1.42
TNRC18-210ENST00000497663 PZPP20742 1482 aa23.93■■□□□ 1.42
TNRC18-210ENST00000497663 FBXO3Q9UK99 471 aa23.91■■□□□ 1.42
TNRC18-210ENST00000497663 MAST1Q9Y2H9 1570 aa23.91■■□□□ 1.42
TNRC18-210ENST00000497663 PKD2Q13563 968 aa23.9■■□□□ 1.42
TNRC18-210ENST00000497663 MIA2Q96PC5 1412 aa23.88■■□□□ 1.41
TNRC18-210ENST00000497663 MROH1Q8NDA8 1641 aa23.87■■□□□ 1.41
TNRC18-210ENST00000497663 ABCC3O15438 1527 aa23.86■■□□□ 1.41
TNRC18-210ENST00000497663 NEURL4Q96JN8 1562 aa23.86■■□□□ 1.41
TNRC18-210ENST00000497663 ABCC5O15440 1437 aa23.85■■□□□ 1.41
TNRC18-210ENST00000497663 RNF17Q9BXT8 1623 aaKnown RBP23.85■■□□□ 1.41
TNRC18-210ENST00000497663 SPDYE1Q8NFV5 336 aaPredicted RBP23.85■■□□□ 1.41
TNRC18-210ENST00000497663 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.84■■□□□ 1.41
TNRC18-210ENST00000497663 STAG3Q9UJ98 1225 aa23.83■■□□□ 1.41
TNRC18-210ENST00000497663 FAM135AQ9P2D6 1515 aa23.82■■□□□ 1.4
TNRC18-210ENST00000497663 RRP7BPQ9NSQ0 103 aa23.8■■□□□ 1.4
TNRC18-210ENST00000497663 IQSEC2Q5JU85 1478 aa23.79■■□□□ 1.4
TNRC18-210ENST00000497663 PTPN23Q9H3S7 1636 aa23.78■■□□□ 1.4
TNRC18-210ENST00000497663 KIF15Q9NS87 1388 aa23.77■■□□□ 1.4
TNRC18-210ENST00000497663 ERVK-7P63135 1459 aa23.76■■□□□ 1.39
TNRC18-210ENST00000497663 EIF2AK4Q9P2K8 1649 aaKnown RBP23.76■■□□□ 1.39
TNRC18-210ENST00000497663 NLRP1Q9C000 1473 aa23.75■■□□□ 1.39
TNRC18-210ENST00000497663 DUOX2Q9NRD8 1548 aa23.75■■□□□ 1.39
TNRC18-210ENST00000497663 SPATA31D1Q6ZQQ2 1576 aa23.75■■□□□ 1.39
TNRC18-210ENST00000497663 UGGT1Q9NYU2 1555 aa23.75■■□□□ 1.39
TNRC18-210ENST00000497663 UBAP1LF5GYI3 381 aa23.75■■□□□ 1.39
TNRC18-210ENST00000497663 ILDR2Q71H61 639 aa23.75■■□□□ 1.39
TNRC18-210ENST00000497663 CHIC2Q9UKJ5 165 aa23.75■■□□□ 1.39
TNRC18-210ENST00000497663 CEP152O94986 1710 aa23.75■■□□□ 1.39
TNRC18-210ENST00000497663 DAPK1P53355 1430 aa23.75■■□□□ 1.39
TNRC18-210ENST00000497663 FGD6Q6ZV73 1430 aa23.75■■□□□ 1.39
TNRC18-210ENST00000497663 POLR1AO95602 1720 aaPredicted RBP23.73■■□□□ 1.39
TNRC18-210ENST00000497663 THEMISQ8N1K5 641 aaPredicted RBP23.73■■□□□ 1.39
TNRC18-210ENST00000497663 CLEC11AQ9Y240 323 aa23.73■■□□□ 1.39
TNRC18-210ENST00000497663 CROCC2H7BZ55 1655 aa23.73■■□□□ 1.39
TNRC18-210ENST00000497663 ANKLE2Q86XL3 938 aa23.72■■□□□ 1.39
TNRC18-210ENST00000497663 SHANK2Q9UPX8 1470 aa23.71■■□□□ 1.39
TNRC18-210ENST00000497663 DISP3Q9P2K9 1392 aa23.71■■□□□ 1.39
TNRC18-210ENST00000497663 ZC3H13Q5T200 1668 aaKnown RBP23.7■■□□□ 1.39
TNRC18-210ENST00000497663 VWDEQ8N2E2 1590 aa23.7■■□□□ 1.38
TNRC18-210ENST00000497663 CFAP65Q6ZU64 1925 aaKnown RBP23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms