RNA–Protein interactions for RNA: ENST00000497391.5

HCLS1-212, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 4

Gene HCLS1, Length 533 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-212ENST00000497391 C3P01024 1663 aa25.2■■□□□ 1.63
HCLS1-212ENST00000497391 WASHC2CQ9Y4E1 1318 aa25.2■■□□□ 1.62
HCLS1-212ENST00000497391 KDM5DQ9BY66 1539 aa25.2■■□□□ 1.62
HCLS1-212ENST00000497391 ZMYM3Q14202 1370 aa25.19■■□□□ 1.62
HCLS1-212ENST00000497391 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.18■■□□□ 1.62
HCLS1-212ENST00000497391 ADGRL2O95490 1459 aa25.17■■□□□ 1.62
HCLS1-212ENST00000497391 UHRF1BP1Q6BDS2 1440 aa25.17■■□□□ 1.62
HCLS1-212ENST00000497391 PREX1Q8TCU6 1659 aa25.17■■□□□ 1.62
HCLS1-212ENST00000497391 RNF17Q9BXT8 1623 aaKnown RBP25.16■■□□□ 1.62
HCLS1-212ENST00000497391 NPATQ14207 1427 aa25.16■■□□□ 1.62
HCLS1-212ENST00000497391 LMTK3Q96Q04 1460 aa25.15■■□□□ 1.62
HCLS1-212ENST00000497391 NCOA1Q15788 1441 aa25.15■■□□□ 1.62
HCLS1-212ENST00000497391 KANK1Q14678 1352 aa25.13■■□□□ 1.61
HCLS1-212ENST00000497391 ITGAEP38570 1179 aa25.12■■□□□ 1.61
HCLS1-212ENST00000497391 ZC3H13Q5T200 1668 aaKnown RBP25.11■■□□□ 1.61
HCLS1-212ENST00000497391 SETD1BQ9UPS6 1966 aaKnown RBP25.09■■□□□ 1.61
HCLS1-212ENST00000497391 RRBP1Q9P2E9 1410 aaKnown RBP25.09■■□□□ 1.61
HCLS1-212ENST00000497391 ROCK1Q13464 1354 aa25.08■■□□□ 1.61
HCLS1-212ENST00000497391 ANKRD50Q9ULJ7 1429 aa25.06■■□□□ 1.6
HCLS1-212ENST00000497391 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.06■■□□□ 1.6
HCLS1-212ENST00000497391 ABCC3O15438 1527 aa25.06■■□□□ 1.6
HCLS1-212ENST00000497391 PRDM15P57071 1507 aaPredicted RBP25.06■■□□□ 1.6
HCLS1-212ENST00000497391 PTPRKQ15262 1439 aa25.05■■□□□ 1.6
HCLS1-212ENST00000497391 PZPP20742 1482 aa25.05■■□□□ 1.6
HCLS1-212ENST00000497391 HSPA2P54652 639 aa25.02■■□□□ 1.6
HCLS1-212ENST00000497391 DEPDC5O75140 1603 aa25.01■■□□□ 1.59
HCLS1-212ENST00000497391 MROH1Q8NDA8 1641 aa25.01■■□□□ 1.59
HCLS1-212ENST00000497391 TNRQ92752 1358 aa24.99■■□□□ 1.59
HCLS1-212ENST00000497391 MYO3AQ8NEV4 1616 aa24.97■■□□□ 1.59
HCLS1-212ENST00000497391 CEP152O94986 1710 aa24.97■■□□□ 1.59
HCLS1-212ENST00000497391 CAMSAP1Q5T5Y3 1602 aa24.97■■□□□ 1.59
HCLS1-212ENST00000497391 CEP170BQ9Y4F5 1589 aaPredicted RBP24.93■■□□□ 1.58
HCLS1-212ENST00000497391 FBXO31Q5XUX0 539 aaPredicted RBP24.93■■□□□ 1.58
HCLS1-212ENST00000497391 ZNF142P52746 1687 aaPredicted RBP24.92■■□□□ 1.58
HCLS1-212ENST00000497391 DMRT2Q9Y5R5 561 aa24.92■■□□□ 1.58
HCLS1-212ENST00000497391 ARHGAP31Q2M1Z3 1444 aa24.92■■□□□ 1.58
HCLS1-212ENST00000497391 NLRP1Q9C000 1473 aa24.91■■□□□ 1.58
HCLS1-212ENST00000497391 LMTK2Q8IWU2 1503 aa24.91■■□□□ 1.58
HCLS1-212ENST00000497391 A2ML1A8K2U0 1454 aa24.9■■□□□ 1.58
HCLS1-212ENST00000497391 ERVK-7P63135 1459 aa24.89■■□□□ 1.58
HCLS1-212ENST00000497391 SPATA31D1Q6ZQQ2 1576 aa24.88■■□□□ 1.57
HCLS1-212ENST00000497391 VWDEQ8N2E2 1590 aa24.88■■□□□ 1.57
HCLS1-212ENST00000497391 UNC13BO14795 1591 aa24.87■■□□□ 1.57
HCLS1-212ENST00000497391 EFCAB6Q5THR3 1501 aa24.85■■□□□ 1.57
HCLS1-212ENST00000497391 PLA2R1Q13018 1463 aa24.83■■□□□ 1.56
HCLS1-212ENST00000497391 THEMISQ8N1K5 641 aaPredicted RBP24.82■■□□□ 1.56
HCLS1-212ENST00000497391 RPRD2Q5VT52 1461 aaKnown RBP24.82■■□□□ 1.56
HCLS1-212ENST00000497391 NUP155O75694 1391 aa24.81■■□□□ 1.56
HCLS1-212ENST00000497391 GCC2Q8IWJ2 1684 aa24.81■■□□□ 1.56
HCLS1-212ENST00000497391 UGGT1Q9NYU2 1555 aa24.8■■□□□ 1.56
HCLS1-212ENST00000497391 HFM1A2PYH4 1435 aa24.8■■□□□ 1.56
HCLS1-212ENST00000497391 PKD2Q13563 968 aa24.8■■□□□ 1.56
HCLS1-212ENST00000497391 TET3O43151 1660 aa24.8■■□□□ 1.56
HCLS1-212ENST00000497391 NAIPQ13075 1403 aa24.79■■□□□ 1.56
HCLS1-212ENST00000497391 IQGAP3Q86VI3 1631 aa24.78■■□□□ 1.56
HCLS1-212ENST00000497391 STAG3Q9UJ98 1225 aa24.77■■□□□ 1.56
HCLS1-212ENST00000497391 PTPRTO14522 1441 aa24.76■■□□□ 1.55
HCLS1-212ENST00000497391 STRCQ7RTU9 1775 aa24.75■■□□□ 1.55
HCLS1-212ENST00000497391 CFAP65Q6ZU64 1925 aaKnown RBP24.75■■□□□ 1.55
HCLS1-212ENST00000497391 ANKLE2Q86XL3 938 aa24.72■■□□□ 1.55
HCLS1-212ENST00000497391 NCKAP5LQ9HCH0 1330 aa24.71■■□□□ 1.55
HCLS1-212ENST00000497391 TRIM52Q96A61 297 aa24.71■■□□□ 1.55
HCLS1-212ENST00000497391 SLC52A1Q9NWF4 448 aa24.71■■□□□ 1.55
HCLS1-212ENST00000497391 NOS1P29475 1434 aa24.69■■□□□ 1.54
HCLS1-212ENST00000497391 ACIN1Q9UKV3 1341 aaKnown RBP24.69■■□□□ 1.54
HCLS1-212ENST00000497391 POLR1AO95602 1720 aaPredicted RBP24.66■■□□□ 1.54
HCLS1-212ENST00000497391 SYNMO15061 1565 aa24.66■■□□□ 1.54
HCLS1-212ENST00000497391 UBR1Q8IWV7 1749 aa24.65■■□□□ 1.54
HCLS1-212ENST00000497391 EID1Q9Y6B2 187 aa24.65■■□□□ 1.54
HCLS1-212ENST00000497391 E9PCH4 1651 aa24.64■■□□□ 1.53
HCLS1-212ENST00000497391 PIK3C2BO00750 1634 aa24.64■■□□□ 1.53
HCLS1-212ENST00000497391 KDM5AP29375 1690 aaKnown RBP24.63■■□□□ 1.53
HCLS1-212ENST00000497391 IDI1Q13907 227 aa24.63■■□□□ 1.53
HCLS1-212ENST00000497391 ADGRB3O60242 1522 aa24.61■■□□□ 1.53
HCLS1-212ENST00000497391 SLC4A1APQ9BWU0 796 aaKnown RBP24.59■■□□□ 1.53
HCLS1-212ENST00000497391 SCAF11Q99590 1463 aaKnown RBP24.58■■□□□ 1.53
HCLS1-212ENST00000497391 NPHP4O75161 1426 aaPredicted RBP24.58■■□□□ 1.53
HCLS1-212ENST00000497391 TMEM2Q9UHN6 1383 aa24.57■■□□□ 1.52
HCLS1-212ENST00000497391 SLIT1O75093 1534 aa24.57■■□□□ 1.52
HCLS1-212ENST00000497391 CHGAP10645 457 aaKnown RBP24.57■■□□□ 1.52
HCLS1-212ENST00000497391 HDGFP51858 240 aaKnown RBP24.57■■□□□ 1.52
HCLS1-212ENST00000497391 SETD5Q9C0A6 1442 aa24.57■■□□□ 1.52
HCLS1-212ENST00000497391 TXNDC2Q86VQ3 553 aa24.56■■□□□ 1.52
HCLS1-212ENST00000497391 MED14O60244 1454 aa24.56■■□□□ 1.52
HCLS1-212ENST00000497391 NEURL4Q96JN8 1562 aa24.55■■□□□ 1.52
HCLS1-212ENST00000497391 ARHGAP23Q9P227 1491 aa24.55■■□□□ 1.52
HCLS1-212ENST00000497391 SPHKAPQ2M3C7 1700 aa24.53■■□□□ 1.52
HCLS1-212ENST00000497391 IQGAP1P46940 1657 aa24.53■■□□□ 1.52
HCLS1-212ENST00000497391 CERKQ8TCT0 537 aa24.52■■□□□ 1.52
HCLS1-212ENST00000497391 PPP1R15AO75807 674 aaPredicted RBP24.51■■□□□ 1.51
HCLS1-212ENST00000497391 TRPM2O94759 1503 aa24.48■■□□□ 1.51
HCLS1-212ENST00000497391 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.48■■□□□ 1.51
HCLS1-212ENST00000497391 BCANQ96GW7 911 aa24.48■■□□□ 1.51
HCLS1-212ENST00000497391 ZNF335Q9H4Z2 1342 aaPredicted RBP24.47■■□□□ 1.51
HCLS1-212ENST00000497391 TMEM131LA2VDJ0 1609 aa24.46■■□□□ 1.51
HCLS1-212ENST00000497391 RAB3GAP2Q9H2M9 1393 aa24.46■■□□□ 1.51
HCLS1-212ENST00000497391 LTKP29376 864 aa24.46■■□□□ 1.51
HCLS1-212ENST00000497391 RIMS2Q9UQ26 1411 aa24.44■■□□□ 1.5
HCLS1-212ENST00000497391 ZNF326Q5BKZ1 582 aaKnown RBP24.43■■□□□ 1.5
HCLS1-212ENST00000497391 FBXO41Q8TF61 875 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms