RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 FER1L4A9Z1Z3 1794 aa17.68■□□□□ 0.42
HLA-B-254ENST00000497377 PTPRMP28827 1452 aa17.68■□□□□ 0.42
HLA-B-254ENST00000497377 MLECQ14165 292 aa17.67■□□□□ 0.42
HLA-B-254ENST00000497377 DNMT1P26358 1616 aaKnown RBP17.67■□□□□ 0.42
HLA-B-254ENST00000497377 SHANK2Q9UPX8 1470 aa17.67■□□□□ 0.42
HLA-B-254ENST00000497377 CROCC2H7BZ55 1655 aa17.66■□□□□ 0.42
HLA-B-254ENST00000497377 RIMS1Q86UR5 1692 aaKnown RBP17.66■□□□□ 0.42
HLA-B-254ENST00000497377 DHX29Q7Z478 1369 aaKnown RBP17.66■□□□□ 0.42
HLA-B-254ENST00000497377 ABCC5O15440 1437 aa17.64■□□□□ 0.42
HLA-B-254ENST00000497377 DAPK1P53355 1430 aa17.64■□□□□ 0.42
HLA-B-254ENST00000497377 SLC4A1APQ9BWU0 796 aaKnown RBP17.62■□□□□ 0.41
HLA-B-254ENST00000497377 FAM50AQ14320 339 aaKnown RBP17.61■□□□□ 0.41
HLA-B-254ENST00000497377 ESF1Q9H501 851 aaKnown RBP17.61■□□□□ 0.41
HLA-B-254ENST00000497377 CNTLNQ9NXG0 1405 aa17.61■□□□□ 0.41
HLA-B-254ENST00000497377 SAMD1Q6SPF0 538 aaPredicted RBP17.6■□□□□ 0.41
HLA-B-254ENST00000497377 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.59■□□□□ 0.41
HLA-B-254ENST00000497377 PPARGC1BQ86YN6 1023 aaKnown RBP17.59■□□□□ 0.41
HLA-B-254ENST00000497377 DUOX2Q9NRD8 1548 aa17.58■□□□□ 0.41
HLA-B-254ENST00000497377 ANKRD30AQ9BXX3 1397 aa17.57■□□□□ 0.4
HLA-B-254ENST00000497377 MROH2AA6NES4 1674 aa17.57■□□□□ 0.4
HLA-B-254ENST00000497377 EIF2AK4Q9P2K8 1649 aaKnown RBP17.57■□□□□ 0.4
HLA-B-254ENST00000497377 FAM135AQ9P2D6 1515 aa17.57■□□□□ 0.4
HLA-B-254ENST00000497377 KIF3BO15066 747 aa17.56■□□□□ 0.4
HLA-B-254ENST00000497377 ZNF219Q9P2Y4 722 aaPredicted RBP17.56■□□□□ 0.4
HLA-B-254ENST00000497377 KIF15Q9NS87 1388 aa17.55■□□□□ 0.4
HLA-B-254ENST00000497377 GGT6Q6P531 493 aa17.55■□□□□ 0.4
HLA-B-254ENST00000497377 ADGRL2O95490 1459 aa17.55■□□□□ 0.4
HLA-B-254ENST00000497377 ERBINQ96RT1 1412 aa17.54■□□□□ 0.4
HLA-B-254ENST00000497377 RNF17Q9BXT8 1623 aaKnown RBP17.53■□□□□ 0.4
HLA-B-254ENST00000497377 NCOA1Q15788 1441 aa17.53■□□□□ 0.4
HLA-B-254ENST00000497377 RRBP1Q9P2E9 1410 aaKnown RBP17.53■□□□□ 0.4
HLA-B-254ENST00000497377 C3P01024 1663 aa17.52■□□□□ 0.4
HLA-B-254ENST00000497377 RRP7BPQ9NSQ0 103 aa17.52■□□□□ 0.4
HLA-B-254ENST00000497377 CHIC2Q9UKJ5 165 aa17.51■□□□□ 0.39
HLA-B-254ENST00000497377 CLTCQ00610 1675 aaKnown RBP17.51■□□□□ 0.39
HLA-B-254ENST00000497377 SETD1BQ9UPS6 1966 aaKnown RBP17.5■□□□□ 0.39
HLA-B-254ENST00000497377 KDM5DQ9BY66 1539 aa17.49■□□□□ 0.39
HLA-B-254ENST00000497377 ZMYM3Q14202 1370 aa17.49■□□□□ 0.39
HLA-B-254ENST00000497377 MYCNP04198 464 aaPredicted RBP17.48■□□□□ 0.39
HLA-B-254ENST00000497377 CEBPAP49715 358 aaPredicted RBP17.48■□□□□ 0.39
HLA-B-254ENST00000497377 ROCK1Q13464 1354 aa17.48■□□□□ 0.39
HLA-B-254ENST00000497377 NPATQ14207 1427 aa17.47■□□□□ 0.39
HLA-B-254ENST00000497377 WASHC2CQ9Y4E1 1318 aa17.47■□□□□ 0.39
HLA-B-254ENST00000497377 ZC3H13Q5T200 1668 aaKnown RBP17.46■□□□□ 0.39
HLA-B-254ENST00000497377 ABCB7O75027 752 aa17.46■□□□□ 0.39
HLA-B-254ENST00000497377 PTPRKQ15262 1439 aa17.46■□□□□ 0.39
HLA-B-254ENST00000497377 PREX1Q8TCU6 1659 aa17.45■□□□□ 0.38
HLA-B-254ENST00000497377 LMTK3Q96Q04 1460 aa17.44■□□□□ 0.38
HLA-B-254ENST00000497377 DEPDC5O75140 1603 aa17.44■□□□□ 0.38
HLA-B-254ENST00000497377 MROH1Q8NDA8 1641 aa17.44■□□□□ 0.38
HLA-B-254ENST00000497377 PRDM15P57071 1507 aaPredicted RBP17.44■□□□□ 0.38
HLA-B-254ENST00000497377 ANKRD50Q9ULJ7 1429 aa17.43■□□□□ 0.38
HLA-B-254ENST00000497377 UHRF1BP1Q6BDS2 1440 aa17.42■□□□□ 0.38
HLA-B-254ENST00000497377 ABCC3O15438 1527 aa17.42■□□□□ 0.38
HLA-B-254ENST00000497377 KANK1Q14678 1352 aa17.4■□□□□ 0.38
HLA-B-254ENST00000497377 PZPP20742 1482 aa17.4■□□□□ 0.38
HLA-B-254ENST00000497377 ITGAEP38570 1179 aa17.4■□□□□ 0.38
HLA-B-254ENST00000497377 CEP152O94986 1710 aa17.38■□□□□ 0.37
HLA-B-254ENST00000497377 VWDEQ8N2E2 1590 aa17.36■□□□□ 0.37
HLA-B-254ENST00000497377 CAMSAP1Q5T5Y3 1602 aa17.36■□□□□ 0.37
HLA-B-254ENST00000497377 ARHGAP31Q2M1Z3 1444 aa17.35■□□□□ 0.37
HLA-B-254ENST00000497377 LMTK2Q8IWU2 1503 aa17.35■□□□□ 0.37
HLA-B-254ENST00000497377 FOXD4L1Q9NU39 408 aa17.34■□□□□ 0.37
HLA-B-254ENST00000497377 ZNF142P52746 1687 aaPredicted RBP17.33■□□□□ 0.37
HLA-B-254ENST00000497377 MYO3AQ8NEV4 1616 aa17.33■□□□□ 0.37
HLA-B-254ENST00000497377 UNC13BO14795 1591 aa17.33■□□□□ 0.37
HLA-B-254ENST00000497377 TNRQ92752 1358 aa17.33■□□□□ 0.36
HLA-B-254ENST00000497377 HSPA2P54652 639 aa17.31■□□□□ 0.36
HLA-B-254ENST00000497377 FBXO31Q5XUX0 539 aaPredicted RBP17.31■□□□□ 0.36
HLA-B-254ENST00000497377 SPATA31D1Q6ZQQ2 1576 aa17.31■□□□□ 0.36
HLA-B-254ENST00000497377 GCC2Q8IWJ2 1684 aa17.3■□□□□ 0.36
HLA-B-254ENST00000497377 ERVK-7P63135 1459 aa17.3■□□□□ 0.36
HLA-B-254ENST00000497377 NLRP1Q9C000 1473 aa17.3■□□□□ 0.36
HLA-B-254ENST00000497377 CEP170BQ9Y4F5 1589 aaPredicted RBP17.29■□□□□ 0.36
HLA-B-254ENST00000497377 HFM1A2PYH4 1435 aa17.29■□□□□ 0.36
HLA-B-254ENST00000497377 NAIPQ13075 1403 aa17.29■□□□□ 0.36
HLA-B-254ENST00000497377 EFCAB6Q5THR3 1501 aa17.28■□□□□ 0.36
HLA-B-254ENST00000497377 A2ML1A8K2U0 1454 aa17.28■□□□□ 0.36
HLA-B-254ENST00000497377 TET3O43151 1660 aa17.27■□□□□ 0.36
HLA-B-254ENST00000497377 RPRD2Q5VT52 1461 aaKnown RBP17.27■□□□□ 0.36
HLA-B-254ENST00000497377 IQGAP3Q86VI3 1631 aa17.26■□□□□ 0.35
HLA-B-254ENST00000497377 CFAP65Q6ZU64 1925 aaKnown RBP17.26■□□□□ 0.35
HLA-B-254ENST00000497377 NUP155O75694 1391 aa17.24■□□□□ 0.35
HLA-B-254ENST00000497377 PLA2R1Q13018 1463 aa17.24■□□□□ 0.35
HLA-B-254ENST00000497377 STRCQ7RTU9 1775 aa17.22■□□□□ 0.35
HLA-B-254ENST00000497377 NOS1P29475 1434 aa17.21■□□□□ 0.34
HLA-B-254ENST00000497377 UGGT1Q9NYU2 1555 aa17.2■□□□□ 0.34
HLA-B-254ENST00000497377 THEMISQ8N1K5 641 aaPredicted RBP17.2■□□□□ 0.34
HLA-B-254ENST00000497377 ACIN1Q9UKV3 1341 aaKnown RBP17.2■□□□□ 0.34
HLA-B-254ENST00000497377 E9PCH4 1651 aa17.18■□□□□ 0.34
HLA-B-254ENST00000497377 PKD2Q13563 968 aa17.18■□□□□ 0.34
HLA-B-254ENST00000497377 PTPRTO14522 1441 aa17.17■□□□□ 0.34
HLA-B-254ENST00000497377 KDM5AP29375 1690 aaKnown RBP17.16■□□□□ 0.34
HLA-B-254ENST00000497377 SYNMO15061 1565 aa17.16■□□□□ 0.34
HLA-B-254ENST00000497377 POLA2Q14181 598 aa17.16■□□□□ 0.34
HLA-B-254ENST00000497377 SLC52A1Q9NWF4 448 aa17.16■□□□□ 0.34
HLA-B-254ENST00000497377 UBR1Q8IWV7 1749 aa17.16■□□□□ 0.34
HLA-B-254ENST00000497377 PIK3C2BO00750 1634 aa17.14■□□□□ 0.33
HLA-B-254ENST00000497377 POLR1AO95602 1720 aaPredicted RBP17.13■□□□□ 0.33
HLA-B-254ENST00000497377 TRIM52Q96A61 297 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms