RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 TYW1BQ6NUM6 668 aa10.58□□□□□ -0.72
VPS36-206ENST00000497149 ZNF687Q8N1G0 1237 aa10.58□□□□□ -0.72
VPS36-206ENST00000497149 KRI1Q8N9T8 703 aaKnown RBP10.58□□□□□ -0.72
VPS36-206ENST00000497149 JPH4Q96JJ6 628 aa10.58□□□□□ -0.72
VPS36-206ENST00000497149 FOSBP53539 338 aa10.57□□□□□ -0.72
VPS36-206ENST00000497149 EN1Q05925 392 aaPredicted RBP10.57□□□□□ -0.72
VPS36-206ENST00000497149 FCHSD2O94868 740 aa10.56□□□□□ -0.72
VPS36-206ENST00000497149 FBXW7Q969H0 707 aa10.56□□□□□ -0.72
VPS36-206ENST00000497149 RBM33Q96EV2 1170 aaKnown RBP10.55□□□□□ -0.72
VPS36-206ENST00000497149 MAP3K7O43318 606 aa10.54□□□□□ -0.72
VPS36-206ENST00000497149 PTGDRQ13258 359 aa10.54□□□□□ -0.72
VPS36-206ENST00000497149 ZNF454Q8N9F8 522 aa10.54□□□□□ -0.72
VPS36-206ENST00000497149 GNPATO15228 680 aa10.53□□□□□ -0.72
VPS36-206ENST00000497149 HIC1Q14526 733 aa10.53□□□□□ -0.72
VPS36-206ENST00000497149 AK7Q96M32 723 aa10.53□□□□□ -0.72
VPS36-206ENST00000497149 LHX6Q9UPM6 363 aa10.53□□□□□ -0.72
VPS36-206ENST00000497149 ZDHHC16Q969W1 377 aa10.52□□□□□ -0.73
VPS36-206ENST00000497149 TSR1Q2NL82 804 aaKnown RBP10.51□□□□□ -0.73
VPS36-206ENST00000497149 CDHR5Q9HBB8 845 aa10.51□□□□□ -0.73
VPS36-206ENST00000497149 NPDC1Q9NQX5 325 aaPredicted RBP10.51□□□□□ -0.73
VPS36-206ENST00000497149 FECHP22830 423 aa10.5□□□□□ -0.73
VPS36-206ENST00000497149 MINK1Q8N4C8 1332 aaPredicted RBP10.5□□□□□ -0.73
VPS36-206ENST00000497149 PBX2P40425 430 aa10.49□□□□□ -0.73
VPS36-206ENST00000497149 PSDA5PKW4 1024 aaPredicted RBP10.48□□□□□ -0.73
VPS36-206ENST00000497149 BRPF1P55201 1214 aaPredicted RBP10.48□□□□□ -0.73
VPS36-206ENST00000497149 MAP2K5Q13163 448 aa10.48□□□□□ -0.73
VPS36-206ENST00000497149 C6orf132Q5T0Z8 1188 aa10.48□□□□□ -0.73
VPS36-206ENST00000497149 ADAM33Q9BZ11 813 aa10.48□□□□□ -0.73
VPS36-206ENST00000497149 IRF6O14896 467 aa10.47□□□□□ -0.73
VPS36-206ENST00000497149 TRIM66O15016 1216 aa10.46□□□□□ -0.73
VPS36-206ENST00000497149 PPP4R3BQ5MIZ7 849 aa10.46□□□□□ -0.73
VPS36-206ENST00000497149 NEUROD2Q15784 382 aa10.45□□□□□ -0.74
VPS36-206ENST00000497149 CERKQ8TCT0 537 aa10.44□□□□□ -0.74
VPS36-206ENST00000497149 CCDC102AQ96A19 550 aa10.43□□□□□ -0.74
VPS36-206ENST00000497149 BCL2L12Q9HB09 334 aa10.41□□□□□ -0.74
VPS36-206ENST00000497149 PDE4DQ08499 809 aa10.4□□□□□ -0.74
VPS36-206ENST00000497149 LSM11P83369 360 aaKnown RBP eCLIP10.39□□□□□ -0.75
VPS36-206ENST00000497149 COL9A1P20849 921 aa10.37□□□□□ -0.75
VPS36-206ENST00000497149 PTPREP23469 700 aa10.37□□□□□ -0.75
VPS36-206ENST00000497149 MYT1LQ9UL68 1186 aa10.37□□□□□ -0.75
VPS36-206ENST00000497149 PRSS12P56730 875 aa10.36□□□□□ -0.75
VPS36-206ENST00000497149 AMHR2Q16671 573 aa10.36□□□□□ -0.75
VPS36-206ENST00000497149 TMEM132AQ24JP5 1023 aa10.36□□□□□ -0.75
VPS36-206ENST00000497149 PADI6Q6TGC4 694 aa10.36□□□□□ -0.75
VPS36-206ENST00000497149 TTC13Q8NBP0 860 aa10.36□□□□□ -0.75
VPS36-206ENST00000497149 RNF166Q96A37 237 aaPredicted RBP10.36□□□□□ -0.75
VPS36-206ENST00000497149 GPBP1L1Q9HC44 474 aaPredicted RBP10.36□□□□□ -0.75
VPS36-206ENST00000497149 RBM27Q9P2N5 1060 aaKnown RBP10.36□□□□□ -0.75
VPS36-206ENST00000497149 CDCA7LQ96GN5 454 aa10.35□□□□□ -0.75
VPS36-206ENST00000497149 PPP1R3GB7ZBB8 358 aa10.33□□□□□ -0.76
VPS36-206ENST00000497149 FAM161AQ3B820 660 aa10.33□□□□□ -0.76
VPS36-206ENST00000497149 KDM4CQ9H3R0 1056 aa10.33□□□□□ -0.76
VPS36-206ENST00000497149 OATP04181 439 aa10.32□□□□□ -0.76
VPS36-206ENST00000497149 ADGRG1Q9Y653 693 aa10.32□□□□□ -0.76
VPS36-206ENST00000497149 ARHGAP33O14559 1287 aa10.31□□□□□ -0.76
VPS36-206ENST00000497149 POTEEQ6S8J3 1075 aa10.31□□□□□ -0.76
VPS36-206ENST00000497149 KCNK17Q96T54 332 aa10.31□□□□□ -0.76
VPS36-206ENST00000497149 PHOX2BQ99453 314 aa10.31□□□□□ -0.76
VPS36-206ENST00000497149 ANKRD13DQ6ZTN6 518 aa10.3□□□□□ -0.76
VPS36-206ENST00000497149 METTL3Q86U44 580 aaKnown RBP10.3□□□□□ -0.76
VPS36-206ENST00000497149 FAM198AQ9UFP1 575 aa10.3□□□□□ -0.76
VPS36-206ENST00000497149 TK2O00142 265 aa10.29□□□□□ -0.76
VPS36-206ENST00000497149 PARP9Q8IXQ6 854 aa10.29□□□□□ -0.76
VPS36-206ENST00000497149 TSKSQ9UJT2 592 aa10.29□□□□□ -0.76
VPS36-206ENST00000497149 TTLL12Q14166 644 aaPredicted RBP10.28□□□□□ -0.76
VPS36-206ENST00000497149 PXYLP1Q8TE99 480 aa10.28□□□□□ -0.76
VPS36-206ENST00000497149 KCNH8Q96L42 1107 aa10.28□□□□□ -0.76
VPS36-206ENST00000497149 TRIM6-TRIM34B2RNG4 842 aa10.26□□□□□ -0.77
VPS36-206ENST00000497149 PSEN2P49810 448 aa10.26□□□□□ -0.77
VPS36-206ENST00000497149 IL27Q8NEV9 243 aa10.26□□□□□ -0.77
VPS36-206ENST00000497149 RBM46Q8TBY0 533 aaKnown RBP10.26□□□□□ -0.77
VPS36-206ENST00000497149 REPIN1Q9BWE0 567 aaKnown RBP10.26□□□□□ -0.77
VPS36-206ENST00000497149 CLCN1P35523 988 aa10.25□□□□□ -0.77
VPS36-206ENST00000497149 MDM2Q00987 491 aaPredicted RBP10.25□□□□□ -0.77
VPS36-206ENST00000497149 PACS2Q86VP3 889 aa10.25□□□□□ -0.77
VPS36-206ENST00000497149 TMUB1Q9BVT8 246 aa10.25□□□□□ -0.77
VPS36-206ENST00000497149 ONECUT3O60422 494 aaPredicted RBP10.24□□□□□ -0.77
VPS36-206ENST00000497149 PROX2Q3B8N5 592 aa10.24□□□□□ -0.77
VPS36-206ENST00000497149 ADGRD1Q6QNK2 874 aa10.24□□□□□ -0.77
VPS36-206ENST00000497149 GIGYF2Q6Y7W6 1299 aaKnown RBP10.24□□□□□ -0.77
VPS36-206ENST00000497149 EYA1Q99502 592 aa10.24□□□□□ -0.77
VPS36-206ENST00000497149 ZBED2Q9BTP6 218 aa10.24□□□□□ -0.77
VPS36-206ENST00000497149 DAXXQ9UER7 740 aaPredicted RBP10.24□□□□□ -0.77
VPS36-206ENST00000497149 NUDT18Q6ZVK8 323 aa10.23□□□□□ -0.77
VPS36-206ENST00000497149 FAM117AQ9C073 453 aa10.23□□□□□ -0.77
VPS36-206ENST00000497149 GPCPD1Q9NPB8 672 aa10.23□□□□□ -0.77
VPS36-206ENST00000497149 AXIN2Q9Y2T1 843 aa10.23□□□□□ -0.77
VPS36-206ENST00000497149 C3orf80F5H4A9 247 aa10.22□□□□□ -0.77
VPS36-206ENST00000497149 NLRP7Q8WX94 980 aa10.22□□□□□ -0.77
VPS36-206ENST00000497149 TATDN2Q93075 761 aa10.22□□□□□ -0.77
VPS36-206ENST00000497149 DMRTA1Q5VZB9 504 aa10.21□□□□□ -0.77
VPS36-206ENST00000497149 SLC4A5Q9BY07 1137 aa10.21□□□□□ -0.77
VPS36-206ENST00000497149 NBPF26B4DH59 902 aa10.2□□□□□ -0.78
VPS36-206ENST00000497149 KIAA1468Q9P260 1216 aa10.2□□□□□ -0.78
VPS36-206ENST00000497149 PNMA3Q9UL41 463 aa10.2□□□□□ -0.78
VPS36-206ENST00000497149 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.19□□□□□ -0.78
VPS36-206ENST00000497149 RCCD1A6NED2 376 aa10.19□□□□□ -0.78
VPS36-206ENST00000497149 HRO43593 1189 aa10.19□□□□□ -0.78
VPS36-206ENST00000497149 MS4A1P11836 297 aa10.19□□□□□ -0.78
VPS36-206ENST00000497149 DDRGK1Q96HY6 314 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms