RNA–Protein interactions for RNA: ENST00000496843.1

PALMD-202, Transcript of palmdelphin, humanhuman

TSL 1 (best)

Gene PALMD, Length 5,294 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALMD-202ENST00000496843 DHX37Q8IY37 1157 aaKnown RBP6.74□□□□□ -1.33
PALMD-202ENST00000496843 VGFO15240 615 aaPredicted RBP6.74□□□□□ -1.33
PALMD-202ENST00000496843 SH3BGRP55822 239 aaPredicted RBP6.74□□□□□ -1.33
PALMD-202ENST00000496843 SWAP70Q9UH65 585 aa6.74□□□□□ -1.33
PALMD-202ENST00000496843 SHTN1A0MZ66 631 aa6.74□□□□□ -1.33
PALMD-202ENST00000496843 FYB1O15117 783 aa6.74□□□□□ -1.33
PALMD-202ENST00000496843 TSR1Q2NL82 804 aaKnown RBP6.73□□□□□ -1.33
PALMD-202ENST00000496843 STK31Q9BXU1 1019 aa6.73□□□□□ -1.33
PALMD-202ENST00000496843 CENPHQ9H3R5 247 aa6.73□□□□□ -1.33
PALMD-202ENST00000496843 KCNJ4P48050 445 aa6.73□□□□□ -1.33
PALMD-202ENST00000496843 GOLIM4O00461 696 aa6.73□□□□□ -1.33
PALMD-202ENST00000496843 NF2P35240 595 aa6.73□□□□□ -1.33
PALMD-202ENST00000496843 HOMER1Q86YM7 354 aa6.73□□□□□ -1.33
PALMD-202ENST00000496843 B4GALNT3Q6L9W6 998 aa6.72□□□□□ -1.33
PALMD-202ENST00000496843 PLPPR3Q6T4P5 718 aa6.72□□□□□ -1.33
PALMD-202ENST00000496843 KLHL34Q8N239 644 aa6.72□□□□□ -1.33
PALMD-202ENST00000496843 ZMAT2Q96NC0 199 aaKnown RBP6.72□□□□□ -1.33
PALMD-202ENST00000496843 MYO6Q9UM54 1294 aa6.72□□□□□ -1.33
PALMD-202ENST00000496843 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.72□□□□□ -1.33
PALMD-202ENST00000496843 TAOK2Q9UL54 1235 aa6.72□□□□□ -1.33
PALMD-202ENST00000496843 GIGYF2Q6Y7W6 1299 aaKnown RBP6.72□□□□□ -1.33
PALMD-202ENST00000496843 KIAA1328Q86T90 577 aa6.72□□□□□ -1.33
PALMD-202ENST00000496843 DDX11Q96FC9 970 aa6.72□□□□□ -1.33
PALMD-202ENST00000496843 TPM1P09493 284 aa6.72□□□□□ -1.33
PALMD-202ENST00000496843 CHMP4BQ9H444 224 aaKnown RBP6.72□□□□□ -1.33
PALMD-202ENST00000496843 TSPY4P0CV99 314 aa6.71□□□□□ -1.33
PALMD-202ENST00000496843 TSPY10P0CW01 314 aa6.71□□□□□ -1.33
PALMD-202ENST00000496843 CFAP57Q96MR6 1250 aa6.71□□□□□ -1.33
PALMD-202ENST00000496843 RNF168Q8IYW5 571 aaPredicted RBP6.71□□□□□ -1.34
PALMD-202ENST00000496843 FAM184BQ9ULE4 1060 aa6.71□□□□□ -1.34
PALMD-202ENST00000496843 ERICH4A6NGS2 130 aa6.7□□□□□ -1.34
PALMD-202ENST00000496843 CT47B1P0C2W7 299 aaPredicted RBP6.7□□□□□ -1.34
PALMD-202ENST00000496843 FAM107BQ9H098 131 aa6.7□□□□□ -1.34
PALMD-202ENST00000496843 IPO7O95373 1038 aaKnown RBP6.7□□□□□ -1.34
PALMD-202ENST00000496843 TTLL5Q6EMB2 1281 aa6.7□□□□□ -1.34
PALMD-202ENST00000496843 ISY1Q9ULR0 285 aaKnown RBP6.7□□□□□ -1.34
PALMD-202ENST00000496843 MICALCLQ6ZW33 695 aa6.7□□□□□ -1.34
PALMD-202ENST00000496843 PDCL2Q8N4E4 241 aa6.69□□□□□ -1.34
PALMD-202ENST00000496843 LIG1P18858 919 aa6.69□□□□□ -1.34
PALMD-202ENST00000496843 CTR9Q6PD62 1173 aa6.69□□□□□ -1.34
PALMD-202ENST00000496843 ZHX1Q9UKY1 873 aaPredicted RBP6.69□□□□□ -1.34
PALMD-202ENST00000496843 PDCL3Q9H2J4 239 aa6.69□□□□□ -1.34
PALMD-202ENST00000496843 ZBTB12Q9Y330 459 aaPredicted RBP6.69□□□□□ -1.34
PALMD-202ENST00000496843 CCDC91Q7Z6B0 441 aa6.69□□□□□ -1.34
PALMD-202ENST00000496843 KIF16BQ96L93 1317 aa6.68□□□□□ -1.34
PALMD-202ENST00000496843 BECN2A8MW95 431 aa6.68□□□□□ -1.34
PALMD-202ENST00000496843 DDX49Q9Y6V7 483 aaKnown RBP6.68□□□□□ -1.34
PALMD-202ENST00000496843 TIGD1Q96MW7 591 aa6.68□□□□□ -1.34
PALMD-202ENST00000496843 BANK1Q8NDB2 785 aa6.68□□□□□ -1.34
PALMD-202ENST00000496843 ZNF622Q969S3 477 aaKnown RBP eCLIP6.68□□□□□ -1.34
PALMD-202ENST00000496843 MNAT1P51948 309 aa6.68□□□□□ -1.34
PALMD-202ENST00000496843 CREBRFQ8IUR6 639 aa6.68□□□□□ -1.34
PALMD-202ENST00000496843 CCDC39Q9UFE4 941 aa6.68□□□□□ -1.34
PALMD-202ENST00000496843 IL27Q8NEV9 243 aa6.67□□□□□ -1.34
PALMD-202ENST00000496843 IFT57Q9NWB7 429 aa6.67□□□□□ -1.34
PALMD-202ENST00000496843 U2SURPO15042 1029 aaKnown RBP6.67□□□□□ -1.34
PALMD-202ENST00000496843 EIF3JO75822 258 aaKnown RBP6.67□□□□□ -1.34
PALMD-202ENST00000496843 SKIDA1Q1XH10 827 aa6.67□□□□□ -1.34
PALMD-202ENST00000496843 DAAM2Q86T65 1068 aa6.67□□□□□ -1.34
PALMD-202ENST00000496843 DNAI2Q9GZS0 605 aa6.67□□□□□ -1.34
PALMD-202ENST00000496843 MS4A1P11836 297 aa6.67□□□□□ -1.34
PALMD-202ENST00000496843 DNAAF4Q8WXU2 420 aa6.67□□□□□ -1.34
PALMD-202ENST00000496843 IBSPP21815 317 aaPredicted RBP6.67□□□□□ -1.34
PALMD-202ENST00000496843 ZNHIT6Q9NWK9 470 aaKnown RBP6.67□□□□□ -1.34
PALMD-202ENST00000496843 KIF3CO14782 793 aa6.66□□□□□ -1.34
PALMD-202ENST00000496843 WDR78Q5VTH9 848 aa6.66□□□□□ -1.34
PALMD-202ENST00000496843 PRDM10Q9NQV6 1147 aa6.66□□□□□ -1.34
PALMD-202ENST00000496843 HIRIP3Q9BW71 556 aaPredicted RBP6.66□□□□□ -1.34
PALMD-202ENST00000496843 GBP2P32456 591 aaPredicted RBP6.65□□□□□ -1.34
PALMD-202ENST00000496843 MRE11P49959 708 aa6.65□□□□□ -1.34
PALMD-202ENST00000496843 HDAC5Q9UQL6 1122 aa6.65□□□□□ -1.34
PALMD-202ENST00000496843 EZRP15311 586 aaKnown RBP6.65□□□□□ -1.34
PALMD-202ENST00000496843 TRIM6-TRIM34B2RNG4 842 aa6.65□□□□□ -1.34
PALMD-202ENST00000496843 RNF20Q5VTR2 975 aa6.65□□□□□ -1.34
PALMD-202ENST00000496843 CCDC146Q8IYE0 955 aa6.65□□□□□ -1.34
PALMD-202ENST00000496843 TRERF1Q96PN7 1200 aa6.65□□□□□ -1.34
PALMD-202ENST00000496843 TRIM34Q9BYJ4 488 aa6.65□□□□□ -1.34
PALMD-202ENST00000496843 MKL2Q9ULH7 1088 aa6.65□□□□□ -1.34
PALMD-202ENST00000496843 CEP63Q96MT8 703 aa6.65□□□□□ -1.35
PALMD-202ENST00000496843 CAVIN1Q6NZI2 390 aaKnown RBP6.64□□□□□ -1.35
PALMD-202ENST00000496843 TONSLQ96HA7 1378 aa6.64□□□□□ -1.35
PALMD-202ENST00000496843 FANCIQ9NVI1 1328 aa6.64□□□□□ -1.35
PALMD-202ENST00000496843 CCDC173Q0VFZ6 552 aa6.64□□□□□ -1.35
PALMD-202ENST00000496843 CFAP53Q96M91 514 aa6.64□□□□□ -1.35
PALMD-202ENST00000496843 PLEKHD1A6NEE1 506 aa6.64□□□□□ -1.35
PALMD-202ENST00000496843 UQCRHLA0A096LP55 91 aa6.63□□□□□ -1.35
PALMD-202ENST00000496843 UQCRHP07919 91 aa6.63□□□□□ -1.35
PALMD-202ENST00000496843 MIPOL1Q8TD10 442 aa6.63□□□□□ -1.35
PALMD-202ENST00000496843 GOLGA6L9A6NEM1 432 aa6.63□□□□□ -1.35
PALMD-202ENST00000496843 TPD52L1Q16890 204 aaPredicted RBP6.63□□□□□ -1.35
PALMD-202ENST00000496843 KIAA1211Q6ZU35 1233 aa6.63□□□□□ -1.35
PALMD-202ENST00000496843 ERLIN1O75477 346 aa6.63□□□□□ -1.35
PALMD-202ENST00000496843 BRPF3Q9ULD4 1205 aa6.63□□□□□ -1.35
PALMD-202ENST00000496843 CHMP2AO43633 222 aa6.63□□□□□ -1.35
PALMD-202ENST00000496843 PPM1EQ8WY54 764 aa6.62□□□□□ -1.35
PALMD-202ENST00000496843 LETM1O95202 739 aaPredicted RBP6.62□□□□□ -1.35
PALMD-202ENST00000496843 NUP133Q8WUM0 1156 aa6.62□□□□□ -1.35
PALMD-202ENST00000496843 CBX1P83916 185 aa6.61□□□□□ -1.35
PALMD-202ENST00000496843 ZBTB17Q13105 803 aa6.61□□□□□ -1.35
PALMD-202ENST00000496843 ANKRD18AQ8IVF6 992 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms