RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 KDM5DQ9BY66 1539 aa24.6■■□□□ 1.53
LMNA-216ENST00000496738 DHX29Q7Z478 1369 aaKnown RBP24.59■■□□□ 1.53
LMNA-216ENST00000496738 PKD2Q13563 968 aa24.58■■□□□ 1.53
LMNA-216ENST00000496738 FAM135AQ9P2D6 1515 aa24.58■■□□□ 1.52
LMNA-216ENST00000496738 A2MP01023 1474 aa24.57■■□□□ 1.52
LMNA-216ENST00000496738 YEATS2Q9ULM3 1422 aa24.57■■□□□ 1.52
LMNA-216ENST00000496738 KIF3BO15066 747 aa24.56■■□□□ 1.52
LMNA-216ENST00000496738 COL17A1Q9UMD9 1497 aaPredicted RBP24.56■■□□□ 1.52
LMNA-216ENST00000496738 DIP2CQ9Y2E4 1556 aa24.55■■□□□ 1.52
LMNA-216ENST00000496738 MAGI2Q86UL8 1455 aa24.54■■□□□ 1.52
LMNA-216ENST00000496738 EIF2AK4Q9P2K8 1649 aaKnown RBP24.52■■□□□ 1.52
LMNA-216ENST00000496738 ZMYM4Q5VZL5 1548 aa24.52■■□□□ 1.52
LMNA-216ENST00000496738 IQGAP3Q86VI3 1631 aa24.52■■□□□ 1.52
LMNA-216ENST00000496738 ANKRD30BQ9BXX2 1392 aa24.51■■□□□ 1.51
LMNA-216ENST00000496738 DEPDC5O75140 1603 aa24.5■■□□□ 1.51
LMNA-216ENST00000496738 MROH1Q8NDA8 1641 aa24.47■■□□□ 1.51
LMNA-216ENST00000496738 TONSLQ96HA7 1378 aa24.45■■□□□ 1.5
LMNA-216ENST00000496738 PRDM15P57071 1507 aaPredicted RBP24.44■■□□□ 1.5
LMNA-216ENST00000496738 GGT6Q6P531 493 aa24.43■■□□□ 1.5
LMNA-216ENST00000496738 KANK1Q14678 1352 aa24.43■■□□□ 1.5
LMNA-216ENST00000496738 RNF17Q9BXT8 1623 aaKnown RBP24.41■■□□□ 1.5
LMNA-216ENST00000496738 VWDEQ8N2E2 1590 aa24.39■■□□□ 1.5
LMNA-216ENST00000496738 ATP10AO60312 1499 aa24.39■■□□□ 1.49
LMNA-216ENST00000496738 RPRD2Q5VT52 1461 aaKnown RBP24.38■■□□□ 1.49
LMNA-216ENST00000496738 BCORL1Q5H9F3 1711 aa24.37■■□□□ 1.49
LMNA-216ENST00000496738 E9PCH4 1651 aa24.37■■□□□ 1.49
LMNA-216ENST00000496738 CEP152O94986 1710 aa24.36■■□□□ 1.49
LMNA-216ENST00000496738 TIMELESSQ9UNS1 1208 aa24.35■■□□□ 1.49
LMNA-216ENST00000496738 TET3O43151 1660 aa24.35■■□□□ 1.49
LMNA-216ENST00000496738 ARHGEF40Q8TER5 1519 aa24.35■■□□□ 1.49
LMNA-216ENST00000496738 SIGLEC1Q9BZZ2 1709 aa24.33■■□□□ 1.49
LMNA-216ENST00000496738 PLA2R1Q13018 1463 aa24.32■■□□□ 1.48
LMNA-216ENST00000496738 PPP1R15AO75807 674 aaPredicted RBP24.3■■□□□ 1.48
LMNA-216ENST00000496738 L3MBTL2Q969R5 705 aa24.3■■□□□ 1.48
LMNA-216ENST00000496738 WASHC2CQ9Y4E1 1318 aa24.29■■□□□ 1.48
LMNA-216ENST00000496738 REREQ9P2R6 1566 aa24.29■■□□□ 1.48
LMNA-216ENST00000496738 EFCAB6Q5THR3 1501 aa24.28■■□□□ 1.48
LMNA-216ENST00000496738 CCDC144AA2RUR9 1427 aa24.28■■□□□ 1.48
LMNA-216ENST00000496738 ABCC3O15438 1527 aa24.27■■□□□ 1.48
LMNA-216ENST00000496738 LMTK2Q8IWU2 1503 aa24.26■■□□□ 1.47
LMNA-216ENST00000496738 MLECQ14165 292 aa24.25■■□□□ 1.47
LMNA-216ENST00000496738 SPHKAPQ2M3C7 1700 aa24.24■■□□□ 1.47
LMNA-216ENST00000496738 AGLP35573 1532 aa24.23■■□□□ 1.47
LMNA-216ENST00000496738 CAMSAP1Q5T5Y3 1602 aa24.22■■□□□ 1.47
LMNA-216ENST00000496738 TRPM2O94759 1503 aa24.2■■□□□ 1.47
LMNA-216ENST00000496738 NPATQ14207 1427 aa24.2■■□□□ 1.46
LMNA-216ENST00000496738 PTPRTO14522 1441 aa24.19■■□□□ 1.46
LMNA-216ENST00000496738 ARID4BQ4LE39 1312 aaPredicted RBP24.19■■□□□ 1.46
LMNA-216ENST00000496738 ZC3H13Q5T200 1668 aaKnown RBP24.19■■□□□ 1.46
LMNA-216ENST00000496738 UGGT1Q9NYU2 1555 aa24.17■■□□□ 1.46
LMNA-216ENST00000496738 CLTCL1P53675 1640 aa24.17■■□□□ 1.46
LMNA-216ENST00000496738 RGL3Q3MIN7 710 aa24.17■■□□□ 1.46
LMNA-216ENST00000496738 CFAP65Q6ZU64 1925 aaKnown RBP24.16■■□□□ 1.46
LMNA-216ENST00000496738 ZNF326Q5BKZ1 582 aaKnown RBP24.14■■□□□ 1.45
LMNA-216ENST00000496738 ZNF316A6NFI3 1004 aaPredicted RBP24.13■■□□□ 1.45
LMNA-216ENST00000496738 CLTCQ00610 1675 aaKnown RBP24.13■■□□□ 1.45
LMNA-216ENST00000496738 NBPF8Q3BBV2 869 aa24.12■■□□□ 1.45
LMNA-216ENST00000496738 KDM2AQ9Y2K7 1162 aa24.12■■□□□ 1.45
LMNA-216ENST00000496738 DCAF11Q8TEB1 546 aa24.11■■□□□ 1.45
LMNA-216ENST00000496738 ARHGAP31Q2M1Z3 1444 aa24.07■■□□□ 1.44
LMNA-216ENST00000496738 SPATA31E1Q6ZUB1 1445 aa24.07■■□□□ 1.44
LMNA-216ENST00000496738 CNTLNQ9NXG0 1405 aa24.05■■□□□ 1.44
LMNA-216ENST00000496738 SYNMO15061 1565 aa24.04■■□□□ 1.44
LMNA-216ENST00000496738 FBXO31Q5XUX0 539 aaPredicted RBP24.04■■□□□ 1.44
LMNA-216ENST00000496738 ESF1Q9H501 851 aaKnown RBP24.04■■□□□ 1.44
LMNA-216ENST00000496738 PPP6R1Q9UPN7 881 aa24.04■■□□□ 1.44
LMNA-216ENST00000496738 NOS1P29475 1434 aa24.04■■□□□ 1.44
LMNA-216ENST00000496738 HIRIP3Q9BW71 556 aaPredicted RBP24.03■■□□□ 1.44
LMNA-216ENST00000496738 PREX1Q8TCU6 1659 aa24.03■■□□□ 1.44
LMNA-216ENST00000496738 CHGAP10645 457 aaKnown RBP24.02■■□□□ 1.44
LMNA-216ENST00000496738 MROH2AA6NES4 1674 aa24.01■■□□□ 1.43
LMNA-216ENST00000496738 KIF1BO60333 1816 aa24.01■■□□□ 1.43
LMNA-216ENST00000496738 UHRF1BP1Q6BDS2 1440 aa23.98■■□□□ 1.43
LMNA-216ENST00000496738 ERVK-7P63135 1459 aa23.97■■□□□ 1.43
LMNA-216ENST00000496738 PIK3C2BO00750 1634 aa23.96■■□□□ 1.43
LMNA-216ENST00000496738 ZMYM3Q14202 1370 aa23.95■■□□□ 1.42
LMNA-216ENST00000496738 PRAG1Q86YV5 1406 aa23.95■■□□□ 1.42
LMNA-216ENST00000496738 ADGRB3O60242 1522 aa23.95■■□□□ 1.42
LMNA-216ENST00000496738 IDI1Q13907 227 aa23.93■■□□□ 1.42
LMNA-216ENST00000496738 NEURL4Q96JN8 1562 aa23.91■■□□□ 1.42
LMNA-216ENST00000496738 RALGAPBQ86X10 1494 aa23.91■■□□□ 1.42
LMNA-216ENST00000496738 PLPPR3Q6T4P5 718 aa23.9■■□□□ 1.42
LMNA-216ENST00000496738 SPATA31D1Q6ZQQ2 1576 aa23.9■■□□□ 1.42
LMNA-216ENST00000496738 HSPA5P11021 654 aaKnown RBP23.9■■□□□ 1.42
LMNA-216ENST00000496738 FER1L4A9Z1Z3 1794 aa23.9■■□□□ 1.42
LMNA-216ENST00000496738 SLC52A1Q9NWF4 448 aa23.89■■□□□ 1.41
LMNA-216ENST00000496738 TRPM1Q7Z4N2 1603 aa23.88■■□□□ 1.41
LMNA-216ENST00000496738 MADDQ8WXG6 1647 aa23.88■■□□□ 1.41
LMNA-216ENST00000496738 CEBPAP49715 358 aaPredicted RBP23.87■■□□□ 1.41
LMNA-216ENST00000496738 EIF4G2P78344 907 aaKnown RBP eCLIP23.87■■□□□ 1.41
LMNA-216ENST00000496738 IFT172Q9UG01 1749 aa23.86■■□□□ 1.41
LMNA-216ENST00000496738 ROCK2O75116 1388 aaKnown RBP23.86■■□□□ 1.41
LMNA-216ENST00000496738 NBPF1Q3BBV0 1214 aa23.85■■□□□ 1.41
LMNA-216ENST00000496738 CARD11Q9BXL7 1154 aa23.85■■□□□ 1.41
LMNA-216ENST00000496738 MYO5BQ9ULV0 1848 aa23.85■■□□□ 1.41
LMNA-216ENST00000496738 SCAF1Q9H7N4 1312 aaKnown RBP23.84■■□□□ 1.41
LMNA-216ENST00000496738 NUTM2DQ5VT03 806 aaPredicted RBP23.84■■□□□ 1.41
LMNA-216ENST00000496738 DIEXFQ68CQ4 756 aaKnown RBP23.84■■□□□ 1.41
LMNA-216ENST00000496738 ADGRF5Q8IZF2 1346 aa23.83■■□□□ 1.41
LMNA-216ENST00000496738 TMEM131LA2VDJ0 1609 aa23.83■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms