RNA–Protein interactions for RNA: ENST00000496363.5

USF1-207, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 990 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-207ENST00000496363 DNMT1P26358 1616 aaKnown RBP20.68■□□□□ 0.9
USF1-207ENST00000496363 A2ML1A8K2U0 1454 aa20.68■□□□□ 0.9
USF1-207ENST00000496363 FBXO31Q5XUX0 539 aaPredicted RBP20.67■□□□□ 0.9
USF1-207ENST00000496363 MAP3K1Q13233 1512 aa20.67■□□□□ 0.9
USF1-207ENST00000496363 PZPP20742 1482 aa20.66■□□□□ 0.9
USF1-207ENST00000496363 FAM135AQ9P2D6 1515 aa20.66■□□□□ 0.9
USF1-207ENST00000496363 MAST1Q9Y2H9 1570 aa20.66■□□□□ 0.9
USF1-207ENST00000496363 ZNF335Q9H4Z2 1342 aaPredicted RBP20.65■□□□□ 0.9
USF1-207ENST00000496363 TSPY4P0CV99 314 aa20.65■□□□□ 0.9
USF1-207ENST00000496363 TSPY10P0CW01 314 aa20.65■□□□□ 0.9
USF1-207ENST00000496363 TNRQ92752 1358 aa20.64■□□□□ 0.89
USF1-207ENST00000496363 PKD2Q13563 968 aa20.64■□□□□ 0.89
USF1-207ENST00000496363 WASHC2CQ9Y4E1 1318 aa20.63■□□□□ 0.89
USF1-207ENST00000496363 RNF17Q9BXT8 1623 aaKnown RBP20.63■□□□□ 0.89
USF1-207ENST00000496363 IQSEC2Q5JU85 1478 aa20.62■□□□□ 0.89
USF1-207ENST00000496363 MYOM3Q5VTT5 1437 aa20.62■□□□□ 0.89
USF1-207ENST00000496363 POLR1AO95602 1720 aaPredicted RBP20.62■□□□□ 0.89
USF1-207ENST00000496363 MIA2Q96PC5 1412 aa20.59■□□□□ 0.89
USF1-207ENST00000496363 NEURL4Q96JN8 1562 aa20.59■□□□□ 0.89
USF1-207ENST00000496363 ABCC3O15438 1527 aa20.58■□□□□ 0.89
USF1-207ENST00000496363 EIF2AK4Q9P2K8 1649 aaKnown RBP20.58■□□□□ 0.89
USF1-207ENST00000496363 MROH1Q8NDA8 1641 aa20.57■□□□□ 0.88
USF1-207ENST00000496363 ZC3H13Q5T200 1668 aaKnown RBP20.57■□□□□ 0.88
USF1-207ENST00000496363 CEP152O94986 1710 aa20.56■□□□□ 0.88
USF1-207ENST00000496363 CFAP65Q6ZU64 1925 aaKnown RBP20.55■□□□□ 0.88
USF1-207ENST00000496363 CROCC2H7BZ55 1655 aa20.55■□□□□ 0.88
USF1-207ENST00000496363 PTPN23Q9H3S7 1636 aa20.53■□□□□ 0.88
USF1-207ENST00000496363 NLRP1Q9C000 1473 aa20.53■□□□□ 0.88
USF1-207ENST00000496363 UGGT1Q9NYU2 1555 aa20.52■□□□□ 0.88
USF1-207ENST00000496363 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.52■□□□□ 0.88
USF1-207ENST00000496363 DUOX2Q9NRD8 1548 aa20.52■□□□□ 0.87
USF1-207ENST00000496363 SPATA31D1Q6ZQQ2 1576 aa20.51■□□□□ 0.87
USF1-207ENST00000496363 DISP3Q9P2K9 1392 aa20.5■□□□□ 0.87
USF1-207ENST00000496363 UBAP1LF5GYI3 381 aa20.5■□□□□ 0.87
USF1-207ENST00000496363 ABCC5O15440 1437 aa20.5■□□□□ 0.87
USF1-207ENST00000496363 ERVK-7P63135 1459 aa20.5■□□□□ 0.87
USF1-207ENST00000496363 SHANK2Q9UPX8 1470 aa20.49■□□□□ 0.87
USF1-207ENST00000496363 KIF15Q9NS87 1388 aa20.47■□□□□ 0.87
USF1-207ENST00000496363 APLP2Q06481 763 aa20.47■□□□□ 0.87
USF1-207ENST00000496363 ANKLE2Q86XL3 938 aa20.47■□□□□ 0.87
USF1-207ENST00000496363 THEMISQ8N1K5 641 aaPredicted RBP20.47■□□□□ 0.87
USF1-207ENST00000496363 DEPDC5O75140 1603 aa20.46■□□□□ 0.87
USF1-207ENST00000496363 VWDEQ8N2E2 1590 aa20.46■□□□□ 0.87
USF1-207ENST00000496363 PRDM15P57071 1507 aaPredicted RBP20.45■□□□□ 0.86
USF1-207ENST00000496363 IQGAP1P46940 1657 aa20.45■□□□□ 0.86
USF1-207ENST00000496363 NPHP4O75161 1426 aaPredicted RBP20.44■□□□□ 0.86
USF1-207ENST00000496363 DAPK1P53355 1430 aa20.44■□□□□ 0.86
USF1-207ENST00000496363 FGD6Q6ZV73 1430 aa20.44■□□□□ 0.86
USF1-207ENST00000496363 RRP7BPQ9NSQ0 103 aa20.44■□□□□ 0.86
USF1-207ENST00000496363 UBR1Q8IWV7 1749 aa20.44■□□□□ 0.86
USF1-207ENST00000496363 MED14O60244 1454 aa20.43■□□□□ 0.86
USF1-207ENST00000496363 CPS1P31327 1500 aa20.43■□□□□ 0.86
USF1-207ENST00000496363 ERBINQ96RT1 1412 aa20.43■□□□□ 0.86
USF1-207ENST00000496363 ILDR2Q71H61 639 aa20.42■□□□□ 0.86
USF1-207ENST00000496363 STRCP1A6NGW2 1772 aa20.4■□□□□ 0.86
USF1-207ENST00000496363 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.38■□□□□ 0.85
USF1-207ENST00000496363 CHIC2Q9UKJ5 165 aa20.38■□□□□ 0.85
USF1-207ENST00000496363 ARHGAP31Q2M1Z3 1444 aa20.36■□□□□ 0.85
USF1-207ENST00000496363 SCAF1Q9H7N4 1312 aaKnown RBP20.35■□□□□ 0.85
USF1-207ENST00000496363 PIK3C2BO00750 1634 aa20.35■□□□□ 0.85
USF1-207ENST00000496363 PIP4K2BP78356 416 aa20.34■□□□□ 0.85
USF1-207ENST00000496363 ANKRD30AQ9BXX3 1397 aa20.34■□□□□ 0.85
USF1-207ENST00000496363 SCAF11Q99590 1463 aaKnown RBP20.32■□□□□ 0.84
USF1-207ENST00000496363 ALKQ9UM73 1620 aa20.32■□□□□ 0.84
USF1-207ENST00000496363 KANK1Q14678 1352 aa20.32■□□□□ 0.84
USF1-207ENST00000496363 ARHGAP23Q9P227 1491 aa20.31■□□□□ 0.84
USF1-207ENST00000496363 SLIT1O75093 1534 aa20.31■□□□□ 0.84
USF1-207ENST00000496363 TOM1O60784 492 aa20.3■□□□□ 0.84
USF1-207ENST00000496363 LTKP29376 864 aa20.3■□□□□ 0.84
USF1-207ENST00000496363 HSPA1LP34931 641 aa20.3■□□□□ 0.84
USF1-207ENST00000496363 LMTK2Q8IWU2 1503 aa20.3■□□□□ 0.84
USF1-207ENST00000496363 LRRC7Q96NW7 1537 aa20.29■□□□□ 0.84
USF1-207ENST00000496363 ADGRL2O95490 1459 aa20.29■□□□□ 0.84
USF1-207ENST00000496363 SYNMO15061 1565 aa20.29■□□□□ 0.84
USF1-207ENST00000496363 FAM50AQ14320 339 aaKnown RBP20.27■□□□□ 0.84
USF1-207ENST00000496363 TXNDC2Q86VQ3 553 aa20.27■□□□□ 0.84
USF1-207ENST00000496363 EFCAB6Q5THR3 1501 aa20.27■□□□□ 0.83
USF1-207ENST00000496363 KDM5AP29375 1690 aaKnown RBP20.24■□□□□ 0.83
USF1-207ENST00000496363 SOCS7O14512 581 aa20.24■□□□□ 0.83
USF1-207ENST00000496363 TMEM2Q9UHN6 1383 aa20.23■□□□□ 0.83
USF1-207ENST00000496363 XIRP1Q702N8 1843 aaKnown RBP20.23■□□□□ 0.83
USF1-207ENST00000496363 IDI1Q13907 227 aa20.22■□□□□ 0.83
USF1-207ENST00000496363 STAG3Q9UJ98 1225 aa20.22■□□□□ 0.83
USF1-207ENST00000496363 MED1Q15648 1581 aaPredicted RBP20.21■□□□□ 0.83
USF1-207ENST00000496363 NOS1P29475 1434 aa20.21■□□□□ 0.83
USF1-207ENST00000496363 EID1Q9Y6B2 187 aa20.21■□□□□ 0.83
USF1-207ENST00000496363 ANKRD50Q9ULJ7 1429 aa20.2■□□□□ 0.82
USF1-207ENST00000496363 ADGRB3O60242 1522 aa20.2■□□□□ 0.82
USF1-207ENST00000496363 SENP3Q9H4L4 574 aaPredicted RBP20.19■□□□□ 0.82
USF1-207ENST00000496363 MYO5BQ9ULV0 1848 aa20.18■□□□□ 0.82
USF1-207ENST00000496363 TET3O43151 1660 aa20.17■□□□□ 0.82
USF1-207ENST00000496363 UNC13BO14795 1591 aa20.15■□□□□ 0.82
USF1-207ENST00000496363 GCC2Q8IWJ2 1684 aa20.15■□□□□ 0.82
USF1-207ENST00000496363 RPRD2Q5VT52 1461 aaKnown RBP20.13■□□□□ 0.81
USF1-207ENST00000496363 SLC26A8Q96RN1 970 aa20.12■□□□□ 0.81
USF1-207ENST00000496363 SLC52A1Q9NWF4 448 aa20.11■□□□□ 0.81
USF1-207ENST00000496363 E9PCH4 1651 aa20.1■□□□□ 0.81
USF1-207ENST00000496363 TMEM131LA2VDJ0 1609 aa20.09■□□□□ 0.81
USF1-207ENST00000496363 PPARGC1BQ86YN6 1023 aaKnown RBP20.08■□□□□ 0.81
USF1-207ENST00000496363 TMEM94Q12767 1356 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms