RNA–Protein interactions for RNA: ENST00000496238.5

POLR1B-214, Transcript of RNA polymerase I subunit B, humanhuman

TSL 4

Gene POLR1B, Length 587 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-214ENST00000496238 TSPY4P0CV99 314 aa29■■■□□ 2.23
POLR1B-214ENST00000496238 TSPY10P0CW01 314 aa29■■■□□ 2.23
POLR1B-214ENST00000496238 KANK4Q5T7N3 995 aaPredicted RBP29■■■□□ 2.23
POLR1B-214ENST00000496238 TCOF1Q13428 1488 aaKnown RBP28.99■■■□□ 2.23
POLR1B-214ENST00000496238 PKD2Q13563 968 aa28.98■■■□□ 2.23
POLR1B-214ENST00000496238 A2ML1A8K2U0 1454 aa28.97■■■□□ 2.23
POLR1B-214ENST00000496238 PZPP20742 1482 aa28.97■■■□□ 2.23
POLR1B-214ENST00000496238 IQSEC2Q5JU85 1478 aa28.95■■■□□ 2.22
POLR1B-214ENST00000496238 MAST1Q9Y2H9 1570 aa28.95■■■□□ 2.22
POLR1B-214ENST00000496238 MYOM3Q5VTT5 1437 aa28.94■■■□□ 2.22
POLR1B-214ENST00000496238 MIA2Q96PC5 1412 aa28.94■■■□□ 2.22
POLR1B-214ENST00000496238 WASHC2CQ9Y4E1 1318 aa28.94■■■□□ 2.22
POLR1B-214ENST00000496238 TNRQ92752 1358 aa28.93■■■□□ 2.22
POLR1B-214ENST00000496238 DNMT1P26358 1616 aaKnown RBP28.93■■■□□ 2.22
POLR1B-214ENST00000496238 FBXO31Q5XUX0 539 aaPredicted RBP28.92■■■□□ 2.22
POLR1B-214ENST00000496238 ZNF335Q9H4Z2 1342 aaPredicted RBP28.89■■■□□ 2.21
POLR1B-214ENST00000496238 RNF17Q9BXT8 1623 aaKnown RBP28.88■■■□□ 2.21
POLR1B-214ENST00000496238 EIF2AK4Q9P2K8 1649 aaKnown RBP28.84■■■□□ 2.21
POLR1B-214ENST00000496238 NLRP1Q9C000 1473 aa28.82■■■□□ 2.2
POLR1B-214ENST00000496238 ABCC3O15438 1527 aa28.82■■■□□ 2.2
POLR1B-214ENST00000496238 ZC3H13Q5T200 1668 aaKnown RBP28.8■■■□□ 2.2
POLR1B-214ENST00000496238 MROH1Q8NDA8 1641 aa28.79■■■□□ 2.2
POLR1B-214ENST00000496238 NEURL4Q96JN8 1562 aa28.79■■■□□ 2.2
POLR1B-214ENST00000496238 DUOX2Q9NRD8 1548 aa28.78■■■□□ 2.2
POLR1B-214ENST00000496238 POLR1AO95602 1720 aaPredicted RBP28.77■■■□□ 2.2
POLR1B-214ENST00000496238 SHANK2Q9UPX8 1470 aa28.76■■■□□ 2.19
POLR1B-214ENST00000496238 UGGT1Q9NYU2 1555 aa28.75■■■□□ 2.19
POLR1B-214ENST00000496238 APLP2Q06481 763 aa28.75■■■□□ 2.19
POLR1B-214ENST00000496238 SPATA31D1Q6ZQQ2 1576 aa28.75■■■□□ 2.19
POLR1B-214ENST00000496238 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.75■■■□□ 2.19
POLR1B-214ENST00000496238 THEMISQ8N1K5 641 aaPredicted RBP28.74■■■□□ 2.19
POLR1B-214ENST00000496238 ABCC5O15440 1437 aa28.74■■■□□ 2.19
POLR1B-214ENST00000496238 PTPN23Q9H3S7 1636 aa28.73■■■□□ 2.19
POLR1B-214ENST00000496238 CROCC2H7BZ55 1655 aa28.72■■■□□ 2.19
POLR1B-214ENST00000496238 KIF15Q9NS87 1388 aa28.72■■■□□ 2.19
POLR1B-214ENST00000496238 ANKLE2Q86XL3 938 aa28.71■■■□□ 2.19
POLR1B-214ENST00000496238 ERVK-7P63135 1459 aa28.71■■■□□ 2.19
POLR1B-214ENST00000496238 FGD6Q6ZV73 1430 aa28.69■■■□□ 2.18
POLR1B-214ENST00000496238 ERBINQ96RT1 1412 aa28.69■■■□□ 2.18
POLR1B-214ENST00000496238 DEPDC5O75140 1603 aa28.68■■■□□ 2.18
POLR1B-214ENST00000496238 DAPK1P53355 1430 aa28.68■■■□□ 2.18
POLR1B-214ENST00000496238 MED14O60244 1454 aa28.67■■■□□ 2.18
POLR1B-214ENST00000496238 CEP152O94986 1710 aa28.67■■■□□ 2.18
POLR1B-214ENST00000496238 UBAP1LF5GYI3 381 aa28.67■■■□□ 2.18
POLR1B-214ENST00000496238 PRDM15P57071 1507 aaPredicted RBP28.67■■■□□ 2.18
POLR1B-214ENST00000496238 CPS1P31327 1500 aa28.64■■■□□ 2.18
POLR1B-214ENST00000496238 RRP7BPQ9NSQ0 103 aa28.64■■■□□ 2.18
POLR1B-214ENST00000496238 DISP3Q9P2K9 1392 aa28.63■■■□□ 2.17
POLR1B-214ENST00000496238 NPHP4O75161 1426 aaPredicted RBP28.63■■■□□ 2.17
POLR1B-214ENST00000496238 ARHGAP31Q2M1Z3 1444 aa28.62■■■□□ 2.17
POLR1B-214ENST00000496238 VWDEQ8N2E2 1590 aa28.61■■■□□ 2.17
POLR1B-214ENST00000496238 IQGAP1P46940 1657 aa28.58■■■□□ 2.16
POLR1B-214ENST00000496238 UBR1Q8IWV7 1749 aa28.55■■■□□ 2.16
POLR1B-214ENST00000496238 ANKRD30AQ9BXX3 1397 aa28.55■■■□□ 2.16
POLR1B-214ENST00000496238 CFAP65Q6ZU64 1925 aaKnown RBP28.53■■■□□ 2.16
POLR1B-214ENST00000496238 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.52■■■□□ 2.166e-7■■□□□ 11.8
POLR1B-214ENST00000496238 CHIC2Q9UKJ5 165 aa28.52■■■□□ 2.16
POLR1B-214ENST00000496238 KANK1Q14678 1352 aa28.51■■■□□ 2.16
POLR1B-214ENST00000496238 LMTK2Q8IWU2 1503 aa28.49■■■□□ 2.15
POLR1B-214ENST00000496238 ARHGAP23Q9P227 1491 aa28.49■■■□□ 2.15
POLR1B-214ENST00000496238 ILDR2Q71H61 639 aa28.49■■■□□ 2.15
POLR1B-214ENST00000496238 SLIT1O75093 1534 aa28.48■■■□□ 2.15
POLR1B-214ENST00000496238 ADGRL2O95490 1459 aa28.48■■■□□ 2.15
POLR1B-214ENST00000496238 SCAF11Q99590 1463 aaKnown RBP28.48■■■□□ 2.15
POLR1B-214ENST00000496238 TOM1O60784 492 aa28.47■■■□□ 2.15
POLR1B-214ENST00000496238 LTKP29376 864 aa28.43■■■□□ 2.14
POLR1B-214ENST00000496238 PIK3C2BO00750 1634 aa28.43■■■□□ 2.14
POLR1B-214ENST00000496238 STRCP1A6NGW2 1772 aa28.42■■■□□ 2.14
POLR1B-214ENST00000496238 PIP4K2BP78356 416 aa28.42■■■□□ 2.14
POLR1B-214ENST00000496238 SCAF1Q9H7N4 1312 aaKnown RBP28.41■■■□□ 2.14
POLR1B-214ENST00000496238 ALKQ9UM73 1620 aa28.4■■■□□ 2.14
POLR1B-214ENST00000496238 LRRC7Q96NW7 1537 aa28.4■■■□□ 2.14
POLR1B-214ENST00000496238 FAM50AQ14320 339 aaKnown RBP28.4■■■□□ 2.14
POLR1B-214ENST00000496238 TXNDC2Q86VQ3 553 aa28.4■■■□□ 2.14
POLR1B-214ENST00000496238 SYNMO15061 1565 aa28.4■■■□□ 2.14
POLR1B-214ENST00000496238 EFCAB6Q5THR3 1501 aa28.39■■■□□ 2.14
POLR1B-214ENST00000496238 TMEM2Q9UHN6 1383 aa28.38■■■□□ 2.13
POLR1B-214ENST00000496238 HSPA1LP34931 641 aa28.38■■■□□ 2.13
POLR1B-214ENST00000496238 KDM5AP29375 1690 aaKnown RBP28.38■■■□□ 2.13
POLR1B-214ENST00000496238 NOS1P29475 1434 aa28.36■■■□□ 2.13
POLR1B-214ENST00000496238 EID1Q9Y6B2 187 aa28.36■■■□□ 2.13
POLR1B-214ENST00000496238 ANKRD50Q9ULJ7 1429 aa28.35■■■□□ 2.13
POLR1B-214ENST00000496238 IDI1Q13907 227 aa28.35■■■□□ 2.13
POLR1B-214ENST00000496238 STAG3Q9UJ98 1225 aa28.33■■■□□ 2.13
POLR1B-214ENST00000496238 SOCS7O14512 581 aa28.32■■■□□ 2.12
POLR1B-214ENST00000496238 RPRD2Q5VT52 1461 aaKnown RBP28.29■■■□□ 2.12
POLR1B-214ENST00000496238 ADGRB3O60242 1522 aa28.28■■■□□ 2.12
POLR1B-214ENST00000496238 SLC52A1Q9NWF4 448 aa28.27■■■□□ 2.12
POLR1B-214ENST00000496238 TET3O43151 1660 aa28.23■■■□□ 2.11
POLR1B-214ENST00000496238 MED1Q15648 1581 aaPredicted RBP28.22■■■□□ 2.11
POLR1B-214ENST00000496238 UNC13BO14795 1591 aa28.21■■■□□ 2.11
POLR1B-214ENST00000496238 ROCK1Q13464 1354 aa28.21■■■□□ 2.11
POLR1B-214ENST00000496238 XIRP1Q702N8 1843 aaKnown RBP28.19■■■□□ 2.1
POLR1B-214ENST00000496238 GCC2Q8IWJ2 1684 aa28.16■■■□□ 2.1
POLR1B-214ENST00000496238 SLC26A8Q96RN1 970 aa28.16■■■□□ 2.1
POLR1B-214ENST00000496238 KCNA6P17658 529 aa28.15■■■□□ 2.1
POLR1B-214ENST00000496238 ZFYVE9O95405 1425 aa28.14■■■□□ 2.1
POLR1B-214ENST00000496238 TMEM94Q12767 1356 aa28.12■■■□□ 2.09
POLR1B-214ENST00000496238 TMEM131LA2VDJ0 1609 aa28.11■■■□□ 2.09
POLR1B-214ENST00000496238 NWD1Q149M9 1564 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms