RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.56■■□□□ 1.36
HLA-A-208ENST00000496081 MLH3Q9UHC1 1453 aa23.54■■□□□ 1.36
HLA-A-208ENST00000496081 DHX29Q7Z478 1369 aaKnown RBP23.53■■□□□ 1.36
HLA-A-208ENST00000496081 PPRC1Q5VV67 1664 aaKnown RBP23.52■■□□□ 1.36
HLA-A-208ENST00000496081 HECW2Q9P2P5 1572 aa23.52■■□□□ 1.35
HLA-A-208ENST00000496081 DEPDC5O75140 1603 aa23.51■■□□□ 1.35
HLA-A-208ENST00000496081 L3MBTL2Q969R5 705 aa23.5■■□□□ 1.35
HLA-A-208ENST00000496081 EIF2AK4Q9P2K8 1649 aaKnown RBP23.5■■□□□ 1.35
HLA-A-208ENST00000496081 RAPGEF3O95398 923 aa23.5■■□□□ 1.35
HLA-A-208ENST00000496081 TEX14Q8IWB6 1497 aa23.5■■□□□ 1.35
HLA-A-208ENST00000496081 RICTORQ6R327 1708 aa23.48■■□□□ 1.35
HLA-A-208ENST00000496081 DIEXFQ68CQ4 756 aaKnown RBP23.47■■□□□ 1.35
HLA-A-208ENST00000496081 A2MP01023 1474 aa23.46■■□□□ 1.35
HLA-A-208ENST00000496081 KIF3BO15066 747 aa23.45■■□□□ 1.34
HLA-A-208ENST00000496081 ABCA6Q8N139 1617 aa23.44■■□□□ 1.34
HLA-A-208ENST00000496081 MROH1Q8NDA8 1641 aa23.42■■□□□ 1.34
HLA-A-208ENST00000496081 FRMPD1Q5SYB0 1578 aa23.42■■□□□ 1.34
HLA-A-208ENST00000496081 VWDEQ8N2E2 1590 aa23.42■■□□□ 1.34
HLA-A-208ENST00000496081 PRDM15P57071 1507 aaPredicted RBP23.41■■□□□ 1.34
HLA-A-208ENST00000496081 PLA2R1Q13018 1463 aa23.41■■□□□ 1.34
HLA-A-208ENST00000496081 KANK1Q14678 1352 aa23.39■■□□□ 1.33
HLA-A-208ENST00000496081 DIP2CQ9Y2E4 1556 aa23.38■■□□□ 1.33
HLA-A-208ENST00000496081 E9PCH4 1651 aa23.37■■□□□ 1.33
HLA-A-208ENST00000496081 ATP10AO60312 1499 aa23.37■■□□□ 1.33
HLA-A-208ENST00000496081 TET3O43151 1660 aa23.36■■□□□ 1.33
HLA-A-208ENST00000496081 RNF17Q9BXT8 1623 aaKnown RBP23.36■■□□□ 1.33
HLA-A-208ENST00000496081 CCDC144AA2RUR9 1427 aa23.36■■□□□ 1.33
HLA-A-208ENST00000496081 BCORL1Q5H9F3 1711 aa23.35■■□□□ 1.33
HLA-A-208ENST00000496081 ZMYM4Q5VZL5 1548 aa23.34■■□□□ 1.33
HLA-A-208ENST00000496081 NBPF8Q3BBV2 869 aa23.33■■□□□ 1.33
HLA-A-208ENST00000496081 YEATS2Q9ULM3 1422 aa23.33■■□□□ 1.33
HLA-A-208ENST00000496081 COL17A1Q9UMD9 1497 aaPredicted RBP23.32■■□□□ 1.32
HLA-A-208ENST00000496081 LMTK2Q8IWU2 1503 aa23.28■■□□□ 1.32
HLA-A-208ENST00000496081 PTPRTO14522 1441 aa23.28■■□□□ 1.32
HLA-A-208ENST00000496081 SPHKAPQ2M3C7 1700 aa23.27■■□□□ 1.32
HLA-A-208ENST00000496081 CEP152O94986 1710 aa23.27■■□□□ 1.31
HLA-A-208ENST00000496081 TRPM2O94759 1503 aa23.26■■□□□ 1.31
HLA-A-208ENST00000496081 GGT6Q6P531 493 aa23.26■■□□□ 1.31
HLA-A-208ENST00000496081 HIRIP3Q9BW71 556 aaPredicted RBP23.26■■□□□ 1.31
HLA-A-208ENST00000496081 EFCAB6Q5THR3 1501 aa23.25■■□□□ 1.31
HLA-A-208ENST00000496081 UHRF1BP1Q6BDS2 1440 aa23.24■■□□□ 1.31
HLA-A-208ENST00000496081 DCAF11Q8TEB1 546 aa23.22■■□□□ 1.31
HLA-A-208ENST00000496081 RGL3Q3MIN7 710 aa23.19■■□□□ 1.3
HLA-A-208ENST00000496081 ZNF326Q5BKZ1 582 aaKnown RBP23.19■■□□□ 1.3
HLA-A-208ENST00000496081 ABCC3O15438 1527 aa23.19■■□□□ 1.3
HLA-A-208ENST00000496081 HSPA5P11021 654 aaKnown RBP23.19■■□□□ 1.3
HLA-A-208ENST00000496081 KDM2AQ9Y2K7 1162 aa23.19■■□□□ 1.3
HLA-A-208ENST00000496081 CLTCL1P53675 1640 aa23.19■■□□□ 1.3
HLA-A-208ENST00000496081 EIF4G2P78344 907 aaKnown RBP eCLIP23.18■■□□□ 1.3
HLA-A-208ENST00000496081 WASHC2CQ9Y4E1 1318 aa23.18■■□□□ 1.3
HLA-A-208ENST00000496081 SPATA31E1Q6ZUB1 1445 aa23.17■■□□□ 1.3
HLA-A-208ENST00000496081 REREQ9P2R6 1566 aa23.17■■□□□ 1.3
HLA-A-208ENST00000496081 NPATQ14207 1427 aa23.14■■□□□ 1.3
HLA-A-208ENST00000496081 RALGAPBQ86X10 1494 aa23.14■■□□□ 1.3
HLA-A-208ENST00000496081 CAMSAP1Q5T5Y3 1602 aa23.14■■□□□ 1.29
HLA-A-208ENST00000496081 ZC3H13Q5T200 1668 aaKnown RBP23.12■■□□□ 1.29
HLA-A-208ENST00000496081 MIER1Q8N108 512 aa23.12■■□□□ 1.29
HLA-A-208ENST00000496081 PRAG1Q86YV5 1406 aa23.11■■□□□ 1.29
HLA-A-208ENST00000496081 AGLP35573 1532 aa23.11■■□□□ 1.29
HLA-A-208ENST00000496081 ARHGEF40Q8TER5 1519 aa23.1■■□□□ 1.29
HLA-A-208ENST00000496081 UGGT1Q9NYU2 1555 aa23.1■■□□□ 1.29
HLA-A-208ENST00000496081 CFAP65Q6ZU64 1925 aaKnown RBP23.08■■□□□ 1.29
HLA-A-208ENST00000496081 NEURL4Q96JN8 1562 aa23.08■■□□□ 1.29
HLA-A-208ENST00000496081 SIGLEC1Q9BZZ2 1709 aa23.08■■□□□ 1.29
HLA-A-208ENST00000496081 DDX10Q13206 875 aaKnown RBP23.07■■□□□ 1.28
HLA-A-208ENST00000496081 TRPM1Q7Z4N2 1603 aa23.07■■□□□ 1.28
HLA-A-208ENST00000496081 ARHGAP31Q2M1Z3 1444 aa23.06■■□□□ 1.28
HLA-A-208ENST00000496081 KIF1BO60333 1816 aa23.05■■□□□ 1.28
HLA-A-208ENST00000496081 CNTLNQ9NXG0 1405 aa23.05■■□□□ 1.28
HLA-A-208ENST00000496081 USP47Q96K76 1375 aa23.04■■□□□ 1.28
HLA-A-208ENST00000496081 CARD11Q9BXL7 1154 aa23.04■■□□□ 1.28
HLA-A-208ENST00000496081 NOS1P29475 1434 aa23.03■■□□□ 1.28
HLA-A-208ENST00000496081 ROCK2O75116 1388 aaKnown RBP23.01■■□□□ 1.27
HLA-A-208ENST00000496081 STAC3Q96MF2 364 aa23.01■■□□□ 1.27
HLA-A-208ENST00000496081 WASHC2AQ641Q2 1341 aa23■■□□□ 1.27
HLA-A-208ENST00000496081 PPP6R1Q9UPN7 881 aa23■■□□□ 1.27
HLA-A-208ENST00000496081 MROH2AA6NES4 1674 aa22.99■■□□□ 1.27
HLA-A-208ENST00000496081 MADDQ8WXG6 1647 aa22.99■■□□□ 1.27
HLA-A-208ENST00000496081 SYNMO15061 1565 aa22.98■■□□□ 1.27
HLA-A-208ENST00000496081 GPRASP1Q5JY77 1395 aa22.98■■□□□ 1.27
HLA-A-208ENST00000496081 C11orf95C9JLR9 678 aaPredicted RBP22.98■■□□□ 1.27
HLA-A-208ENST00000496081 ADGRB3O60242 1522 aa22.98■■□□□ 1.27
HLA-A-208ENST00000496081 NBPF1Q3BBV0 1214 aa22.97■■□□□ 1.27
HLA-A-208ENST00000496081 PIK3C2BO00750 1634 aa22.97■■□□□ 1.27
HLA-A-208ENST00000496081 LAMC1P11047 1609 aa22.95■■□□□ 1.26
HLA-A-208ENST00000496081 POLR1AO95602 1720 aaPredicted RBP22.95■■□□□ 1.26
HLA-A-208ENST00000496081 IFT172Q9UG01 1749 aa22.95■■□□□ 1.26
HLA-A-208ENST00000496081 PREX1Q8TCU6 1659 aa22.94■■□□□ 1.26
HLA-A-208ENST00000496081 CCDC7Q96M83 1385 aa22.94■■□□□ 1.26
HLA-A-208ENST00000496081 CLTCQ00610 1675 aaKnown RBP22.94■■□□□ 1.26
HLA-A-208ENST00000496081 MLECQ14165 292 aa22.93■■□□□ 1.26
HLA-A-208ENST00000496081 MYOM2P54296 1465 aa22.92■■□□□ 1.26
HLA-A-208ENST00000496081 CHGAP10645 457 aaKnown RBP22.91■■□□□ 1.26
HLA-A-208ENST00000496081 KIF7Q2M1P5 1343 aa22.89■■□□□ 1.26
HLA-A-208ENST00000496081 ARID4BQ4LE39 1312 aaPredicted RBP22.89■■□□□ 1.26
HLA-A-208ENST00000496081 ST20-MTHFSA0A0A6YYL1 179 aa22.89■■□□□ 1.26
HLA-A-208ENST00000496081 IDI1Q13907 227 aa22.88■■□□□ 1.25
HLA-A-208ENST00000496081 FBXO31Q5XUX0 539 aaPredicted RBP22.88■■□□□ 1.25
HLA-A-208ENST00000496081 SLC52A1Q9NWF4 448 aa22.88■■□□□ 1.25
HLA-A-208ENST00000496081 ERVK-7P63135 1459 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms