RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 DDRGK1Q96HY6 314 aa10.98□□□□□ -0.65
SSR3-208ENST00000496050 CDHR5Q9HBB8 845 aa10.98□□□□□ -0.65
SSR3-208ENST00000496050 SCUBE2Q9NQ36 999 aa10.98□□□□□ -0.65
SSR3-208ENST00000496050 FAM117AQ9C073 453 aa10.97□□□□□ -0.65
SSR3-208ENST00000496050 ZSWIM6Q9HCJ5 1215 aa10.97□□□□□ -0.65
SSR3-208ENST00000496050 TTLL12Q14166 644 aaPredicted RBP10.96□□□□□ -0.65
SSR3-208ENST00000496050 ARSIQ5FYB1 569 aa10.96□□□□□ -0.65
SSR3-208ENST00000496050 PARP9Q8IXQ6 854 aa10.96□□□□□ -0.65
SSR3-208ENST00000496050 ZDHHC16Q969W1 377 aa10.96□□□□□ -0.65
SSR3-208ENST00000496050 POTEJP0CG39 1038 aa10.95□□□□□ -0.66
SSR3-208ENST00000496050 TSR1Q2NL82 804 aaKnown RBP10.95□□□□□ -0.66
SSR3-208ENST00000496050 ZNF454Q8N9F8 522 aa10.95□□□□□ -0.66
SSR3-208ENST00000496050 C6orf132Q5T0Z8 1188 aa10.94□□□□□ -0.66
SSR3-208ENST00000496050 ZNF710Q8N1W2 664 aa10.94□□□□□ -0.66
SSR3-208ENST00000496050 NUDT7P0C024 238 aa10.93□□□□□ -0.66
SSR3-208ENST00000496050 HOXB3P14651 431 aaPredicted RBP10.93□□□□□ -0.66
SSR3-208ENST00000496050 POTEB2H3BUK9 544 aa10.92□□□□□ -0.66
SSR3-208ENST00000496050 OATP04181 439 aa10.91□□□□□ -0.66
SSR3-208ENST00000496050 GPR153Q6NV75 609 aa10.91□□□□□ -0.66
SSR3-208ENST00000496050 CLCN1P35523 988 aa10.9□□□□□ -0.66
SSR3-208ENST00000496050 KHSRPQ92945 711 aaKnown RBP eCLIP10.9□□□□□ -0.666e-7■■■□□ 16.4
SSR3-208ENST00000496050 SNPHO15079 494 aa10.88□□□□□ -0.67
SSR3-208ENST00000496050 GIGYF2Q6Y7W6 1299 aaKnown RBP10.88□□□□□ -0.67
SSR3-208ENST00000496050 PLEKHG3A1L390 1219 aa10.87□□□□□ -0.67
SSR3-208ENST00000496050 PSDA5PKW4 1024 aaPredicted RBP10.87□□□□□ -0.67
SSR3-208ENST00000496050 ADAM33Q9BZ11 813 aa10.87□□□□□ -0.67
SSR3-208ENST00000496050 GPCPD1Q9NPB8 672 aa10.86□□□□□ -0.67
SSR3-208ENST00000496050 RBM27Q9P2N5 1060 aaKnown RBP10.86□□□□□ -0.67
SSR3-208ENST00000496050 MDM2Q00987 491 aaPredicted RBP10.85□□□□□ -0.67
SSR3-208ENST00000496050 GOPCQ9HD26 462 aa10.85□□□□□ -0.67
SSR3-208ENST00000496050 PRSS12P56730 875 aa10.84□□□□□ -0.67
SSR3-208ENST00000496050 PPP4R3BQ5MIZ7 849 aa10.84□□□□□ -0.67
SSR3-208ENST00000496050 PADI6Q6TGC4 694 aa10.84□□□□□ -0.67
SSR3-208ENST00000496050 TMUB1Q9BVT8 246 aa10.84□□□□□ -0.67
SSR3-208ENST00000496050 REPIN1Q9BWE0 567 aaKnown RBP10.84□□□□□ -0.67
SSR3-208ENST00000496050 LHX6Q9UPM6 363 aa10.84□□□□□ -0.67
SSR3-208ENST00000496050 SSTR3P32745 418 aaPredicted RBP10.83□□□□□ -0.68
SSR3-208ENST00000496050 METTL3Q86U44 580 aaKnown RBP10.83□□□□□ -0.68
SSR3-208ENST00000496050 PHOX2BQ99453 314 aa10.83□□□□□ -0.68
SSR3-208ENST00000496050 MS4A1P11836 297 aa10.82□□□□□ -0.68
SSR3-208ENST00000496050 TTC13Q8NBP0 860 aa10.82□□□□□ -0.68
SSR3-208ENST00000496050 ADGRG1Q9Y653 693 aa10.82□□□□□ -0.68
SSR3-208ENST00000496050 FAM161AQ3B820 660 aa10.81□□□□□ -0.68
SSR3-208ENST00000496050 PXYLP1Q8TE99 480 aa10.81□□□□□ -0.68
SSR3-208ENST00000496050 CDCA7LQ96GN5 454 aa10.81□□□□□ -0.68
SSR3-208ENST00000496050 RBM46Q8TBY0 533 aaKnown RBP10.8□□□□□ -0.68
SSR3-208ENST00000496050 RSPH6AQ9H0K4 717 aa10.8□□□□□ -0.68
SSR3-208ENST00000496050 PCMTD1Q96MG8 357 aaPredicted RBP10.79□□□□□ -0.68
SSR3-208ENST00000496050 BCL2L12Q9HB09 334 aa10.79□□□□□ -0.68
SSR3-208ENST00000496050 HOXB1P14653 301 aaPredicted RBP10.78□□□□□ -0.68
SSR3-208ENST00000496050 PTPREP23469 700 aa10.78□□□□□ -0.68
SSR3-208ENST00000496050 FAM217BQ9NTX9 383 aaPredicted RBP10.76□□□□□ -0.69
SSR3-208ENST00000496050 BEGAINQ9BUH8 593 aa10.75□□□□□ -0.69
SSR3-208ENST00000496050 COL9A1P20849 921 aa10.74□□□□□ -0.69
SSR3-208ENST00000496050 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.73□□□□□ -0.69
SSR3-208ENST00000496050 PPP1R3GB7ZBB8 358 aa10.73□□□□□ -0.69
SSR3-208ENST00000496050 SKIV2LQ15477 1246 aaKnown RBP10.73□□□□□ -0.69
SSR3-208ENST00000496050 SH3D19Q5HYK7 790 aa10.73□□□□□ -0.69
SSR3-208ENST00000496050 PACS2Q86VP3 889 aa10.73□□□□□ -0.69
SSR3-208ENST00000496050 NLRP7Q8WX94 980 aa10.73□□□□□ -0.69
SSR3-208ENST00000496050 ZMYND15Q9H091 742 aa10.72□□□□□ -0.69
SSR3-208ENST00000496050 KCNH8Q96L42 1107 aa10.71□□□□□ -0.69
SSR3-208ENST00000496050 EYA1Q99502 592 aa10.71□□□□□ -0.69
SSR3-208ENST00000496050 ATP1B4Q9UN42 357 aaPredicted RBP10.71□□□□□ -0.69
SSR3-208ENST00000496050 RCCD1A6NED2 376 aa10.7□□□□□ -0.7
SSR3-208ENST00000496050 FLIIQ13045 1269 aa10.7□□□□□ -0.7
SSR3-208ENST00000496050 DIXDC1Q155Q3 683 aa10.7□□□□□ -0.7
SSR3-208ENST00000496050 FAM198AQ9UFP1 575 aa10.7□□□□□ -0.7
SSR3-208ENST00000496050 ONECUT3O60422 494 aaPredicted RBP10.69□□□□□ -0.7
SSR3-208ENST00000496050 TSKSQ9UJT2 592 aa10.69□□□□□ -0.7
SSR3-208ENST00000496050 TRIM6-TRIM34B2RNG4 842 aa10.68□□□□□ -0.7
SSR3-208ENST00000496050 NBPF26B4DH59 902 aa10.68□□□□□ -0.7
SSR3-208ENST00000496050 NUDT18Q6ZVK8 323 aa10.68□□□□□ -0.7
SSR3-208ENST00000496050 TATDN2Q93075 761 aa10.67□□□□□ -0.7
SSR3-208ENST00000496050 PNMA3Q9UL41 463 aa10.67□□□□□ -0.7
SSR3-208ENST00000496050 SUPT5HO00267 1087 aaKnown RBP10.66□□□□□ -0.7
SSR3-208ENST00000496050 DNAJB2P25686 324 aa10.66□□□□□ -0.7
SSR3-208ENST00000496050 SULF1Q8IWU6 871 aa10.66□□□□□ -0.7
SSR3-208ENST00000496050 POLR3EQ9NVU0 708 aa10.66□□□□□ -0.7
SSR3-208ENST00000496050 OTUD5Q96G74 571 aa10.65□□□□□ -0.7
SSR3-208ENST00000496050 KCNK17Q96T54 332 aa10.64□□□□□ -0.71
SSR3-208ENST00000496050 TBC1D2Q9BYX2 928 aa10.63□□□□□ -0.71
SSR3-208ENST00000496050 MYSM1Q5VVJ2 828 aa10.62□□□□□ -0.71
SSR3-208ENST00000496050 PROCA1Q8NCQ7 364 aaPredicted RBP10.62□□□□□ -0.71
SSR3-208ENST00000496050 ARXQ96QS3 562 aa10.61□□□□□ -0.71
SSR3-208ENST00000496050 ERBB3P21860 1342 aa10.6□□□□□ -0.71
SSR3-208ENST00000496050 DDX11L8A8MPP1 907 aa10.6□□□□□ -0.71
SSR3-208ENST00000496050 CD46P15529 392 aa10.6□□□□□ -0.71
SSR3-208ENST00000496050 PROX2Q3B8N5 592 aa10.6□□□□□ -0.71
SSR3-208ENST00000496050 RSPH4AQ5TD94 716 aa10.6□□□□□ -0.71
SSR3-208ENST00000496050 NUTM1Q86Y26 1132 aa10.6□□□□□ -0.71
SSR3-208ENST00000496050 TMEM134Q9H6X4 195 aa10.6□□□□□ -0.71
SSR3-208ENST00000496050 KIAA1468Q9P260 1216 aa10.6□□□□□ -0.71
SSR3-208ENST00000496050 C3orf80F5H4A9 247 aa10.58□□□□□ -0.72
SSR3-208ENST00000496050 ARHGAP33O14559 1287 aa10.58□□□□□ -0.72
SSR3-208ENST00000496050 CLK2P49760 499 aaKnown RBP10.58□□□□□ -0.72
SSR3-208ENST00000496050 HDGFP51858 240 aaKnown RBP10.58□□□□□ -0.72
SSR3-208ENST00000496050 LHX8Q68G74 356 aa10.58□□□□□ -0.72
SSR3-208ENST00000496050 ZBED2Q9BTP6 218 aa10.58□□□□□ -0.72
SSR3-208ENST00000496050 SMAPO00193 183 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms