RNA–Protein interactions for RNA: ENST00000495988.1

APOBEC3A-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 4

Gene APOBEC3A, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-204ENST00000495988 ZNF142P52746 1687 aaPredicted RBP26.62■■□□□ 1.85
APOBEC3A-204ENST00000495988 KDM5DQ9BY66 1539 aa26.61■■□□□ 1.85
APOBEC3A-204ENST00000495988 FAM135AQ9P2D6 1515 aa26.6■■□□□ 1.85
APOBEC3A-204ENST00000495988 CEP170BQ9Y4F5 1589 aaPredicted RBP26.6■■□□□ 1.85
APOBEC3A-204ENST00000495988 WASHC2CQ9Y4E1 1318 aa26.59■■□□□ 1.85
APOBEC3A-204ENST00000495988 PZPP20742 1482 aa26.54■■□□□ 1.84
APOBEC3A-204ENST00000495988 FBXO31Q5XUX0 539 aaPredicted RBP26.53■■□□□ 1.84
APOBEC3A-204ENST00000495988 NCKAP5LQ9HCH0 1330 aa26.53■■□□□ 1.84
APOBEC3A-204ENST00000495988 PLA2R1Q13018 1463 aa26.52■■□□□ 1.84
APOBEC3A-204ENST00000495988 RNF17Q9BXT8 1623 aaKnown RBP26.52■■□□□ 1.84
APOBEC3A-204ENST00000495988 PTPN23Q9H3S7 1636 aa26.52■■□□□ 1.84
APOBEC3A-204ENST00000495988 EIF2AK4Q9P2K8 1649 aaKnown RBP26.51■■□□□ 1.83
APOBEC3A-204ENST00000495988 A2ML1A8K2U0 1454 aa26.51■■□□□ 1.83
APOBEC3A-204ENST00000495988 TNRQ92752 1358 aa26.51■■□□□ 1.83
APOBEC3A-204ENST00000495988 CROCC2H7BZ55 1655 aa26.48■■□□□ 1.83
APOBEC3A-204ENST00000495988 DNMT1P26358 1616 aaKnown RBP26.48■■□□□ 1.83
APOBEC3A-204ENST00000495988 PKD2Q13563 968 aa26.48■■□□□ 1.83
APOBEC3A-204ENST00000495988 DUOX2Q9NRD8 1548 aa26.47■■□□□ 1.83
APOBEC3A-204ENST00000495988 TCOF1Q13428 1488 aaKnown RBP26.47■■□□□ 1.83
APOBEC3A-204ENST00000495988 SHANK2Q9UPX8 1470 aa26.47■■□□□ 1.83
APOBEC3A-204ENST00000495988 ABCC5O15440 1437 aa26.47■■□□□ 1.83
APOBEC3A-204ENST00000495988 FGD6Q6ZV73 1430 aa26.47■■□□□ 1.83
APOBEC3A-204ENST00000495988 ZC3H13Q5T200 1668 aaKnown RBP26.46■■□□□ 1.83
APOBEC3A-204ENST00000495988 LTBP4Q8N2S1 1624 aa26.46■■□□□ 1.83
APOBEC3A-204ENST00000495988 ABCC3O15438 1527 aa26.44■■□□□ 1.82
APOBEC3A-204ENST00000495988 DAPK1P53355 1430 aa26.43■■□□□ 1.82
APOBEC3A-204ENST00000495988 KIF15Q9NS87 1388 aa26.43■■□□□ 1.82
APOBEC3A-204ENST00000495988 MROH1Q8NDA8 1641 aa26.43■■□□□ 1.82
APOBEC3A-204ENST00000495988 RRP7BPQ9NSQ0 103 aa26.4■■□□□ 1.82
APOBEC3A-204ENST00000495988 NLRP1Q9C000 1473 aa26.39■■□□□ 1.82
APOBEC3A-204ENST00000495988 CEP152O94986 1710 aa26.39■■□□□ 1.81
APOBEC3A-204ENST00000495988 ERBINQ96RT1 1412 aa26.38■■□□□ 1.81
APOBEC3A-204ENST00000495988 ZNF335Q9H4Z2 1342 aaPredicted RBP26.37■■□□□ 1.81
APOBEC3A-204ENST00000495988 POLR1AO95602 1720 aaPredicted RBP26.36■■□□□ 1.81
APOBEC3A-204ENST00000495988 SPATA31D1Q6ZQQ2 1576 aa26.35■■□□□ 1.81
APOBEC3A-204ENST00000495988 UGGT1Q9NYU2 1555 aa26.35■■□□□ 1.81
APOBEC3A-204ENST00000495988 IQSEC2Q5JU85 1478 aa26.35■■□□□ 1.81
APOBEC3A-204ENST00000495988 PRDM15P57071 1507 aaPredicted RBP26.34■■□□□ 1.81
APOBEC3A-204ENST00000495988 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.33■■□□□ 1.81
APOBEC3A-204ENST00000495988 THEMISQ8N1K5 641 aaPredicted RBP26.33■■□□□ 1.81
APOBEC3A-204ENST00000495988 CHIC2Q9UKJ5 165 aa26.33■■□□□ 1.81
APOBEC3A-204ENST00000495988 ERVK-7P63135 1459 aa26.33■■□□□ 1.81
APOBEC3A-204ENST00000495988 ANKRD30AQ9BXX3 1397 aa26.32■■□□□ 1.8
APOBEC3A-204ENST00000495988 NEURL4Q96JN8 1562 aa26.31■■□□□ 1.8
APOBEC3A-204ENST00000495988 ANKLE2Q86XL3 938 aa26.29■■□□□ 1.8
APOBEC3A-204ENST00000495988 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.29■■□□□ 1.8
APOBEC3A-204ENST00000495988 CFAP65Q6ZU64 1925 aaKnown RBP26.29■■□□□ 1.8
APOBEC3A-204ENST00000495988 DEPDC5O75140 1603 aa26.28■■□□□ 1.8
APOBEC3A-204ENST00000495988 FAM50AQ14320 339 aaKnown RBP26.28■■□□□ 1.8
APOBEC3A-204ENST00000495988 ARHGAP31Q2M1Z3 1444 aa26.25■■□□□ 1.79
APOBEC3A-204ENST00000495988 KANK1Q14678 1352 aa26.25■■□□□ 1.79
APOBEC3A-204ENST00000495988 ADGRL2O95490 1459 aa26.22■■□□□ 1.79
APOBEC3A-204ENST00000495988 NPHP4O75161 1426 aaPredicted RBP26.21■■□□□ 1.79
APOBEC3A-204ENST00000495988 MED14O60244 1454 aa26.2■■□□□ 1.78
APOBEC3A-204ENST00000495988 UBR1Q8IWV7 1749 aa26.19■■□□□ 1.78
APOBEC3A-204ENST00000495988 LMTK2Q8IWU2 1503 aa26.17■■□□□ 1.78
APOBEC3A-204ENST00000495988 VWDEQ8N2E2 1590 aa26.16■■□□□ 1.78
APOBEC3A-204ENST00000495988 IQGAP1P46940 1657 aa26.16■■□□□ 1.78
APOBEC3A-204ENST00000495988 UBAP1LF5GYI3 381 aa26.16■■□□□ 1.78
APOBEC3A-204ENST00000495988 CPS1P31327 1500 aa26.15■■□□□ 1.78
APOBEC3A-204ENST00000495988 ANKRD50Q9ULJ7 1429 aa26.13■■□□□ 1.77
APOBEC3A-204ENST00000495988 PIK3C2BO00750 1634 aa26.1■■□□□ 1.77
APOBEC3A-204ENST00000495988 EFCAB6Q5THR3 1501 aa26.09■■□□□ 1.77
APOBEC3A-204ENST00000495988 SCAF11Q99590 1463 aaKnown RBP26.09■■□□□ 1.77
APOBEC3A-204ENST00000495988 SLIT1O75093 1534 aa26.09■■□□□ 1.77
APOBEC3A-204ENST00000495988 ARHGAP23Q9P227 1491 aa26.08■■□□□ 1.77
APOBEC3A-204ENST00000495988 STAG3Q9UJ98 1225 aa26.07■■□□□ 1.76
APOBEC3A-204ENST00000495988 TXNDC2Q86VQ3 553 aa26.06■■□□□ 1.76
APOBEC3A-204ENST00000495988 SYNMO15061 1565 aa26.05■■□□□ 1.76
APOBEC3A-204ENST00000495988 PPARGC1BQ86YN6 1023 aaKnown RBP26.05■■□□□ 1.76
APOBEC3A-204ENST00000495988 LTKP29376 864 aa26.04■■□□□ 1.76
APOBEC3A-204ENST00000495988 IDI1Q13907 227 aa26.03■■□□□ 1.76
APOBEC3A-204ENST00000495988 EID1Q9Y6B2 187 aa26.03■■□□□ 1.76
APOBEC3A-204ENST00000495988 NOS1P29475 1434 aa26.03■■□□□ 1.76
APOBEC3A-204ENST00000495988 KDM5AP29375 1690 aaKnown RBP26.02■■□□□ 1.76
APOBEC3A-204ENST00000495988 STRCP1A6NGW2 1772 aa26.01■■□□□ 1.75
APOBEC3A-204ENST00000495988 ROCK1Q13464 1354 aa26.01■■□□□ 1.75
APOBEC3A-204ENST00000495988 TMEM2Q9UHN6 1383 aa26.01■■□□□ 1.75
APOBEC3A-204ENST00000495988 RPRD2Q5VT52 1461 aaKnown RBP25.99■■□□□ 1.75
APOBEC3A-204ENST00000495988 DISP3Q9P2K9 1392 aa25.99■■□□□ 1.75
APOBEC3A-204ENST00000495988 TOM1O60784 492 aa25.99■■□□□ 1.75
APOBEC3A-204ENST00000495988 TET3O43151 1660 aa25.99■■□□□ 1.75
APOBEC3A-204ENST00000495988 UNC13BO14795 1591 aa25.99■■□□□ 1.75
APOBEC3A-204ENST00000495988 SCAF1Q9H7N4 1312 aaKnown RBP25.98■■□□□ 1.75
APOBEC3A-204ENST00000495988 ITGAEP38570 1179 aa25.98■■□□□ 1.75
APOBEC3A-204ENST00000495988 PIP4K2BP78356 416 aa25.97■■□□□ 1.75
APOBEC3A-204ENST00000495988 SLC52A1Q9NWF4 448 aa25.96■■□□□ 1.75
APOBEC3A-204ENST00000495988 ADGRB3O60242 1522 aa25.96■■□□□ 1.75
APOBEC3A-204ENST00000495988 LRRC7Q96NW7 1537 aa25.95■■□□□ 1.74
APOBEC3A-204ENST00000495988 GCC2Q8IWJ2 1684 aa25.95■■□□□ 1.74
APOBEC3A-204ENST00000495988 IQGAP3Q86VI3 1631 aa25.88■■□□□ 1.73
APOBEC3A-204ENST00000495988 ALKQ9UM73 1620 aa25.88■■□□□ 1.73
APOBEC3A-204ENST00000495988 E9PCH4 1651 aa25.87■■□□□ 1.73
APOBEC3A-204ENST00000495988 HSPA1LP34931 641 aa25.86■■□□□ 1.73
APOBEC3A-204ENST00000495988 NUP155O75694 1391 aa25.85■■□□□ 1.73
APOBEC3A-204ENST00000495988 MYO5BQ9ULV0 1848 aa25.85■■□□□ 1.73
APOBEC3A-204ENST00000495988 SLC26A8Q96RN1 970 aa25.83■■□□□ 1.73
APOBEC3A-204ENST00000495988 BCANQ96GW7 911 aa25.82■■□□□ 1.72
APOBEC3A-204ENST00000495988 TMEM131LA2VDJ0 1609 aa25.81■■□□□ 1.72
APOBEC3A-204ENST00000495988 RRBP1Q9P2E9 1410 aaKnown RBP25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms