RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 DAPK1P53355 1430 aa19.03■□□□□ 0.64
MRPL55-233ENST00000495899 KIF3BO15066 747 aa19.03■□□□□ 0.64
MRPL55-233ENST00000495899 ZBTB22O15209 634 aa19.03■□□□□ 0.64
MRPL55-233ENST00000495899 FAM50AQ14320 339 aaKnown RBP19.02■□□□□ 0.64
MRPL55-233ENST00000495899 CEBPAP49715 358 aaPredicted RBP19.01■□□□□ 0.63
MRPL55-233ENST00000495899 PPARGC1BQ86YN6 1023 aaKnown RBP19.01■□□□□ 0.63
MRPL55-233ENST00000495899 DCAF8L1A6NGE4 600 aa19■□□□□ 0.63
MRPL55-233ENST00000495899 DNMT1P26358 1616 aaKnown RBP19■□□□□ 0.63
MRPL55-233ENST00000495899 FOXD4L1Q9NU39 408 aa18.98■□□□□ 0.63
MRPL55-233ENST00000495899 ZMYM3Q14202 1370 aa18.97■□□□□ 0.63
MRPL55-233ENST00000495899 ANKRD30AQ9BXX3 1397 aa18.97■□□□□ 0.63
MRPL55-233ENST00000495899 KIF15Q9NS87 1388 aa18.97■□□□□ 0.63
MRPL55-233ENST00000495899 RRP7BPQ9NSQ0 103 aa18.97■□□□□ 0.63
MRPL55-233ENST00000495899 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.96■□□□□ 0.63
MRPL55-233ENST00000495899 DUOX2Q9NRD8 1548 aa18.96■□□□□ 0.63
MRPL55-233ENST00000495899 CHIC2Q9UKJ5 165 aa18.95■□□□□ 0.62
MRPL55-233ENST00000495899 NCOA1Q15788 1441 aa18.94■□□□□ 0.62
MRPL55-233ENST00000495899 CROCC2H7BZ55 1655 aa18.94■□□□□ 0.62
MRPL55-233ENST00000495899 WASHC2CQ9Y4E1 1318 aa18.94■□□□□ 0.62
MRPL55-233ENST00000495899 FAM135AQ9P2D6 1515 aa18.94■□□□□ 0.62
MRPL55-233ENST00000495899 LMTK3Q96Q04 1460 aa18.93■□□□□ 0.62
MRPL55-233ENST00000495899 NPATQ14207 1427 aa18.92■□□□□ 0.62
MRPL55-233ENST00000495899 ERBINQ96RT1 1412 aa18.92■□□□□ 0.62
MRPL55-233ENST00000495899 MROH2AA6NES4 1674 aa18.92■□□□□ 0.62
MRPL55-233ENST00000495899 ADGRL2O95490 1459 aa18.91■□□□□ 0.62
MRPL55-233ENST00000495899 EIF2AK4Q9P2K8 1649 aaKnown RBP18.9■□□□□ 0.62
MRPL55-233ENST00000495899 C3P01024 1663 aa18.89■□□□□ 0.61
MRPL55-233ENST00000495899 SLC4A2P04920 1241 aa18.88■□□□□ 0.61
MRPL55-233ENST00000495899 KDM5DQ9BY66 1539 aa18.88■□□□□ 0.61
MRPL55-233ENST00000495899 CLTCQ00610 1675 aaKnown RBP18.87■□□□□ 0.61
MRPL55-233ENST00000495899 ROCK1Q13464 1354 aa18.87■□□□□ 0.61
MRPL55-233ENST00000495899 UHRF1BP1Q6BDS2 1440 aa18.87■□□□□ 0.61
MRPL55-233ENST00000495899 RNF17Q9BXT8 1623 aaKnown RBP18.87■□□□□ 0.61
MRPL55-233ENST00000495899 RRBP1Q9P2E9 1410 aaKnown RBP18.87■□□□□ 0.61
MRPL55-233ENST00000495899 PTPRKQ15262 1439 aa18.86■□□□□ 0.61
MRPL55-233ENST00000495899 SETD1BQ9UPS6 1966 aaKnown RBP18.84■□□□□ 0.61
MRPL55-233ENST00000495899 HSPA2P54652 639 aa18.84■□□□□ 0.61
MRPL55-233ENST00000495899 PREX1Q8TCU6 1659 aa18.83■□□□□ 0.61
MRPL55-233ENST00000495899 ANKRD50Q9ULJ7 1429 aa18.83■□□□□ 0.6
MRPL55-233ENST00000495899 PZPP20742 1482 aa18.82■□□□□ 0.6
MRPL55-233ENST00000495899 KANK1Q14678 1352 aa18.81■□□□□ 0.6
MRPL55-233ENST00000495899 ABCC3O15438 1527 aa18.81■□□□□ 0.6
MRPL55-233ENST00000495899 ITGAEP38570 1179 aa18.81■□□□□ 0.6
MRPL55-233ENST00000495899 FBXO31Q5XUX0 539 aaPredicted RBP18.8■□□□□ 0.6
MRPL55-233ENST00000495899 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.8■□□□□ 0.6
MRPL55-233ENST00000495899 MROH1Q8NDA8 1641 aa18.8■□□□□ 0.6
MRPL55-233ENST00000495899 PRDM15P57071 1507 aaPredicted RBP18.79■□□□□ 0.6
MRPL55-233ENST00000495899 ZC3H13Q5T200 1668 aaKnown RBP18.78■□□□□ 0.6
MRPL55-233ENST00000495899 TNRQ92752 1358 aa18.77■□□□□ 0.6
MRPL55-233ENST00000495899 ARHGAP31Q2M1Z3 1444 aa18.76■□□□□ 0.59
MRPL55-233ENST00000495899 DEPDC5O75140 1603 aa18.76■□□□□ 0.59
MRPL55-233ENST00000495899 LMTK2Q8IWU2 1503 aa18.73■□□□□ 0.59
MRPL55-233ENST00000495899 VWDEQ8N2E2 1590 aa18.72■□□□□ 0.59
MRPL55-233ENST00000495899 A2ML1A8K2U0 1454 aa18.71■□□□□ 0.59
MRPL55-233ENST00000495899 NLRP1Q9C000 1473 aa18.71■□□□□ 0.59
MRPL55-233ENST00000495899 MYO3AQ8NEV4 1616 aa18.7■□□□□ 0.58
MRPL55-233ENST00000495899 SPATA31D1Q6ZQQ2 1576 aa18.69■□□□□ 0.58
MRPL55-233ENST00000495899 CEP170BQ9Y4F5 1589 aaPredicted RBP18.69■□□□□ 0.58
MRPL55-233ENST00000495899 POTEDQ86YR6 584 aa18.69■□□□□ 0.58
MRPL55-233ENST00000495899 CAMSAP1Q5T5Y3 1602 aa18.69■□□□□ 0.58
MRPL55-233ENST00000495899 ERVK-7P63135 1459 aa18.69■□□□□ 0.58
MRPL55-233ENST00000495899 ZNF142P52746 1687 aaPredicted RBP18.67■□□□□ 0.58
MRPL55-233ENST00000495899 THEMISQ8N1K5 641 aaPredicted RBP18.67■□□□□ 0.58
MRPL55-233ENST00000495899 CEP152O94986 1710 aa18.66■□□□□ 0.58
MRPL55-233ENST00000495899 PLA2R1Q13018 1463 aa18.66■□□□□ 0.58
MRPL55-233ENST00000495899 PKD2Q13563 968 aa18.66■□□□□ 0.58
MRPL55-233ENST00000495899 NAIPQ13075 1403 aa18.65■□□□□ 0.58
MRPL55-233ENST00000495899 UNC13BO14795 1591 aa18.64■□□□□ 0.58
MRPL55-233ENST00000495899 NUP155O75694 1391 aa18.64■□□□□ 0.57
MRPL55-233ENST00000495899 HFM1A2PYH4 1435 aa18.64■□□□□ 0.57
MRPL55-233ENST00000495899 PTPRTO14522 1441 aa18.64■□□□□ 0.57
MRPL55-233ENST00000495899 RPRD2Q5VT52 1461 aaKnown RBP18.64■□□□□ 0.57
MRPL55-233ENST00000495899 EFCAB6Q5THR3 1501 aa18.63■□□□□ 0.57
MRPL55-233ENST00000495899 STRCQ7RTU9 1775 aa18.61■□□□□ 0.57
MRPL55-233ENST00000495899 NCKAP5LQ9HCH0 1330 aa18.61■□□□□ 0.57
MRPL55-233ENST00000495899 UGGT1Q9NYU2 1555 aa18.6■□□□□ 0.57
MRPL55-233ENST00000495899 NOS1P29475 1434 aa18.6■□□□□ 0.57
MRPL55-233ENST00000495899 SLC52A1Q9NWF4 448 aa18.6■□□□□ 0.57
MRPL55-233ENST00000495899 ANKLE2Q86XL3 938 aa18.59■□□□□ 0.57
MRPL55-233ENST00000495899 TET3O43151 1660 aa18.57■□□□□ 0.56
MRPL55-233ENST00000495899 IQGAP3Q86VI3 1631 aa18.57■□□□□ 0.56
MRPL55-233ENST00000495899 MYCNP04198 464 aaPredicted RBP18.57■□□□□ 0.56
MRPL55-233ENST00000495899 IDI1Q13907 227 aa18.57■□□□□ 0.56
MRPL55-233ENST00000495899 ACIN1Q9UKV3 1341 aaKnown RBP18.54■□□□□ 0.56
MRPL55-233ENST00000495899 STAG3Q9UJ98 1225 aa18.54■□□□□ 0.56
MRPL55-233ENST00000495899 GCC2Q8IWJ2 1684 aa18.54■□□□□ 0.56
MRPL55-233ENST00000495899 SYNMO15061 1565 aa18.51■□□□□ 0.55
MRPL55-233ENST00000495899 TRIM52Q96A61 297 aa18.51■□□□□ 0.55
MRPL55-233ENST00000495899 EID1Q9Y6B2 187 aa18.5■□□□□ 0.55
MRPL55-233ENST00000495899 CFAP65Q6ZU64 1925 aaKnown RBP18.5■□□□□ 0.55
MRPL55-233ENST00000495899 MED14O60244 1454 aa18.5■□□□□ 0.55
MRPL55-233ENST00000495899 TMEM2Q9UHN6 1383 aa18.49■□□□□ 0.55
MRPL55-233ENST00000495899 ARHGAP23Q9P227 1491 aa18.49■□□□□ 0.55
MRPL55-233ENST00000495899 UBR1Q8IWV7 1749 aa18.49■□□□□ 0.55
MRPL55-233ENST00000495899 SLIT1O75093 1534 aa18.49■□□□□ 0.55
MRPL55-233ENST00000495899 TXNDC2Q86VQ3 553 aa18.48■□□□□ 0.55
MRPL55-233ENST00000495899 CERKQ8TCT0 537 aa18.48■□□□□ 0.55
MRPL55-233ENST00000495899 E9PCH4 1651 aa18.47■□□□□ 0.55
MRPL55-233ENST00000495899 KDM5AP29375 1690 aaKnown RBP18.47■□□□□ 0.55
MRPL55-233ENST00000495899 PIK3C2BO00750 1634 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms