RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.4□□□□□ -0.42
TM9SF4-207ENST00000495749 ITSN2Q9NZM3 1697 aa12.4□□□□□ -0.42
TM9SF4-207ENST00000495749 CHGAP10645 457 aaKnown RBP12.39□□□□□ -0.43
TM9SF4-207ENST00000495749 ARHGEF12Q9NZN5 1544 aa12.39□□□□□ -0.43
TM9SF4-207ENST00000495749 SAMD9LQ8IVG5 1584 aa12.39□□□□□ -0.43
TM9SF4-207ENST00000495749 ADGRL2O95490 1459 aa12.38□□□□□ -0.43
TM9SF4-207ENST00000495749 BCL11AQ9H165 835 aa12.38□□□□□ -0.43
TM9SF4-207ENST00000495749 ABCC2Q92887 1545 aa12.38□□□□□ -0.43
TM9SF4-207ENST00000495749 ROCK2O75116 1388 aaKnown RBP12.37□□□□□ -0.43
TM9SF4-207ENST00000495749 CYB5RLQ6IPT4 315 aa12.37□□□□□ -0.43
TM9SF4-207ENST00000495749 GGT6Q6P531 493 aa12.37□□□□□ -0.43
TM9SF4-207ENST00000495749 PPP4R2Q9NY27 417 aa12.37□□□□□ -0.43
TM9SF4-207ENST00000495749 CCDC144AA2RUR9 1427 aa12.37□□□□□ -0.43
TM9SF4-207ENST00000495749 SCAPERQ9BY12 1400 aa12.35□□□□□ -0.43
TM9SF4-207ENST00000495749 ADCY10Q96PN6 1610 aa12.35□□□□□ -0.43
TM9SF4-207ENST00000495749 B4GALNT3Q6L9W6 998 aa12.35□□□□□ -0.43
TM9SF4-207ENST00000495749 PLCH2O75038 1416 aa12.34□□□□□ -0.43
TM9SF4-207ENST00000495749 FANCIQ9NVI1 1328 aa12.34□□□□□ -0.43
TM9SF4-207ENST00000495749 ERICH6BQ5W0A0 696 aa12.34□□□□□ -0.43
TM9SF4-207ENST00000495749 NUTM2DQ5VT03 806 aaPredicted RBP12.34□□□□□ -0.43
TM9SF4-207ENST00000495749 CDC42BPBQ9Y5S2 1711 aa12.34□□□□□ -0.43
TM9SF4-207ENST00000495749 ZBED9Q6R2W3 1325 aa12.33□□□□□ -0.44
TM9SF4-207ENST00000495749 RAPGEF3O95398 923 aa12.33□□□□□ -0.44
TM9SF4-207ENST00000495749 CC2D1BQ5T0F9 858 aaKnown RBP12.33□□□□□ -0.44
TM9SF4-207ENST00000495749 ERICH6Q7L0X2 663 aa12.33□□□□□ -0.44
TM9SF4-207ENST00000495749 SPATA31E1Q6ZUB1 1445 aa12.33□□□□□ -0.44
TM9SF4-207ENST00000495749 AEBP2Q6ZN18 517 aaPredicted RBP12.32□□□□□ -0.44
TM9SF4-207ENST00000495749 UHRF1BP1LA0JNW5 1464 aa12.32□□□□□ -0.44
TM9SF4-207ENST00000495749 FAM135AQ9P2D6 1515 aa12.32□□□□□ -0.44
TM9SF4-207ENST00000495749 TMC1Q8TDI8 760 aa12.31□□□□□ -0.44
TM9SF4-207ENST00000495749 SHANK2Q9UPX8 1470 aa12.3□□□□□ -0.44
TM9SF4-207ENST00000495749 PLA2R1Q13018 1463 aa12.3□□□□□ -0.44
TM9SF4-207ENST00000495749 ADGBQ8N7X0 1667 aa12.29□□□□□ -0.44
TM9SF4-207ENST00000495749 ASXL2Q76L83 1435 aa12.28□□□□□ -0.44
TM9SF4-207ENST00000495749 ZCCHC11Q5TAX3 1644 aaKnown RBP12.28□□□□□ -0.44
TM9SF4-207ENST00000495749 PREX2Q70Z35 1606 aa12.27□□□□□ -0.44
TM9SF4-207ENST00000495749 CROCC2H7BZ55 1655 aa12.27□□□□□ -0.44
TM9SF4-207ENST00000495749 FANCAO15360 1455 aa12.26□□□□□ -0.45
TM9SF4-207ENST00000495749 PANK3Q9H999 370 aa12.25□□□□□ -0.45
TM9SF4-207ENST00000495749 ARHGEF5Q12774 1597 aa12.25□□□□□ -0.45
TM9SF4-207ENST00000495749 CFAP70Q5T0N1 1121 aa12.24□□□□□ -0.45
TM9SF4-207ENST00000495749 WDR7Q9Y4E6 1490 aa12.24□□□□□ -0.45
TM9SF4-207ENST00000495749 DHX29Q7Z478 1369 aaKnown RBP12.23□□□□□ -0.45
TM9SF4-207ENST00000495749 ADGRL1O94910 1474 aa12.23□□□□□ -0.45
TM9SF4-207ENST00000495749 BCORL1Q5H9F3 1711 aa12.22□□□□□ -0.45
TM9SF4-207ENST00000495749 DISP3Q9P2K9 1392 aa12.21□□□□□ -0.45
TM9SF4-207ENST00000495749 A2MP01023 1474 aa12.21□□□□□ -0.45
TM9SF4-207ENST00000495749 MYO5CQ9NQX4 1742 aa12.21□□□□□ -0.45
TM9SF4-207ENST00000495749 PRAG1Q86YV5 1406 aa12.21□□□□□ -0.46
TM9SF4-207ENST00000495749 SAFB2Q14151 953 aaKnown RBP eCLIP12.2□□□□□ -0.46
TM9SF4-207ENST00000495749 TMEM132EQ6IEE7 984 aa12.2□□□□□ -0.46
TM9SF4-207ENST00000495749 TESK2Q96S53 571 aa12.2□□□□□ -0.46
TM9SF4-207ENST00000495749 NUDCQ9Y266 331 aa12.2□□□□□ -0.46
TM9SF4-207ENST00000495749 MLECQ14165 292 aa12.2□□□□□ -0.46
TM9SF4-207ENST00000495749 WASHC2CQ9Y4E1 1318 aa12.2□□□□□ -0.46
TM9SF4-207ENST00000495749 KIF13AQ9H1H9 1805 aa12.19□□□□□ -0.46
TM9SF4-207ENST00000495749 SMG6Q86US8 1419 aaKnown RBP12.19□□□□□ -0.46
TM9SF4-207ENST00000495749 ADGRF5Q8IZF2 1346 aa12.19□□□□□ -0.46
TM9SF4-207ENST00000495749 RALGAPBQ86X10 1494 aa12.19□□□□□ -0.46
TM9SF4-207ENST00000495749 KANK1Q14678 1352 aa12.19□□□□□ -0.46
TM9SF4-207ENST00000495749 TMF1P82094 1093 aa12.19□□□□□ -0.46
TM9SF4-207ENST00000495749 CD109Q6YHK3 1445 aa12.19□□□□□ -0.46
TM9SF4-207ENST00000495749 POLR1AO95602 1720 aaPredicted RBP12.19□□□□□ -0.46
TM9SF4-207ENST00000495749 DUOX2Q9NRD8 1548 aa12.19□□□□□ -0.46
TM9SF4-207ENST00000495749 CCDC136Q96JN2 1154 aa12.19□□□□□ -0.46
TM9SF4-207ENST00000495749 UHRF1BP1Q6BDS2 1440 aa12.18□□□□□ -0.46
TM9SF4-207ENST00000495749 PNISRQ8TF01 805 aaKnown RBP12.18□□□□□ -0.46
TM9SF4-207ENST00000495749 TRAK1Q9UPV9 953 aa12.18□□□□□ -0.46
TM9SF4-207ENST00000495749 ABCC1P33527 1531 aa12.17□□□□□ -0.46
TM9SF4-207ENST00000495749 DIP2BQ9P265 1576 aa12.17□□□□□ -0.46
TM9SF4-207ENST00000495749 TNNT2P45379 298 aaPredicted RBP12.16□□□□□ -0.46
TM9SF4-207ENST00000495749 FAM69CQ0P6D2 419 aa12.16□□□□□ -0.46
TM9SF4-207ENST00000495749 PLPPR3Q6T4P5 718 aa12.16□□□□□ -0.46
TM9SF4-207ENST00000495749 UGGT1Q9NYU2 1555 aa12.16□□□□□ -0.46
TM9SF4-207ENST00000495749 ERBINQ96RT1 1412 aa12.15□□□□□ -0.46
TM9SF4-207ENST00000495749 KDM5CP41229 1560 aa12.15□□□□□ -0.46
TM9SF4-207ENST00000495749 KDM5DQ9BY66 1539 aa12.15□□□□□ -0.46
TM9SF4-207ENST00000495749 PER1O15534 1290 aaPredicted RBP12.14□□□□□ -0.47
TM9SF4-207ENST00000495749 STK26Q9P289 416 aa12.14□□□□□ -0.47
TM9SF4-207ENST00000495749 GLI2P10070 1586 aa12.14□□□□□ -0.47
TM9SF4-207ENST00000495749 CFAP65Q6ZU64 1925 aaKnown RBP12.14□□□□□ -0.47
TM9SF4-207ENST00000495749 NOP58Q9Y2X3 529 aaKnown RBP12.13□□□□□ -0.47
TM9SF4-207ENST00000495749 ARID4BQ4LE39 1312 aaPredicted RBP12.13□□□□□ -0.47
TM9SF4-207ENST00000495749 RNF123Q5XPI4 1314 aa12.13□□□□□ -0.47
TM9SF4-207ENST00000495749 KNSTRNQ9Y448 316 aa12.13□□□□□ -0.47
TM9SF4-207ENST00000495749 PAK3O75914 559 aaPredicted RBP12.13□□□□□ -0.47
TM9SF4-207ENST00000495749 MYBBP1AQ9BQG0 1328 aaKnown RBP12.12□□□□□ -0.47
TM9SF4-207ENST00000495749 CDCA7LQ96GN5 454 aa12.12□□□□□ -0.47
TM9SF4-207ENST00000495749 KTN1Q86UP2 1357 aaKnown RBP12.12□□□□□ -0.47
TM9SF4-207ENST00000495749 NBR1Q14596 966 aa12.11□□□□□ -0.47
TM9SF4-207ENST00000495749 ATP10AO60312 1499 aa12.11□□□□□ -0.47
TM9SF4-207ENST00000495749 ATP7AQ04656 1500 aa12.11□□□□□ -0.47
TM9SF4-207ENST00000495749 RALBP1Q15311 655 aa12.11□□□□□ -0.47
TM9SF4-207ENST00000495749 FBXO31Q5XUX0 539 aaPredicted RBP12.11□□□□□ -0.47
TM9SF4-207ENST00000495749 ZFYVE16Q7Z3T8 1539 aa12.1□□□□□ -0.47
TM9SF4-207ENST00000495749 NLRP13Q86W25 1043 aa12.1□□□□□ -0.47
TM9SF4-207ENST00000495749 MAP3K4Q9Y6R4 1608 aa12.09□□□□□ -0.47
TM9SF4-207ENST00000495749 TRHP20396 242 aaPredicted RBP12.09□□□□□ -0.47
TM9SF4-207ENST00000495749 RTEL1-TNFRSF6BF6WH68 1400 aa12.09□□□□□ -0.47
TM9SF4-207ENST00000495749 MAST1Q9Y2H9 1570 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms