RNA–Protein interactions for RNA: ENST00000495666.5

RFTN1-211, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-211ENST00000495666 WASHC2CQ9Y4E1 1318 aa16.79■□□□□ 0.28
RFTN1-211ENST00000495666 PTPN23Q9H3S7 1636 aa16.78■□□□□ 0.28
RFTN1-211ENST00000495666 CEP152O94986 1710 aa16.77■□□□□ 0.28
RFTN1-211ENST00000495666 MAP3K1Q13233 1512 aa16.76■□□□□ 0.27
RFTN1-211ENST00000495666 CROCC2H7BZ55 1655 aa16.76■□□□□ 0.27
RFTN1-211ENST00000495666 RSPH4AQ5TD94 716 aa16.75■□□□□ 0.27
RFTN1-211ENST00000495666 SENP3Q9H4L4 574 aaPredicted RBP16.75■□□□□ 0.27
RFTN1-211ENST00000495666 MAST1Q9Y2H9 1570 aa16.74■□□□□ 0.27
RFTN1-211ENST00000495666 PTPRTO14522 1441 aa16.74■□□□□ 0.27
RFTN1-211ENST00000495666 TNRQ92752 1358 aa16.74■□□□□ 0.27
RFTN1-211ENST00000495666 CHIC2Q9UKJ5 165 aa16.73■□□□□ 0.27
RFTN1-211ENST00000495666 DNMT1P26358 1616 aaKnown RBP16.73■□□□□ 0.27
RFTN1-211ENST00000495666 MIA2Q96PC5 1412 aa16.72■□□□□ 0.27
RFTN1-211ENST00000495666 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.72■□□□□ 0.27
RFTN1-211ENST00000495666 RRP7BPQ9NSQ0 103 aa16.72■□□□□ 0.27
RFTN1-211ENST00000495666 POLR1AO95602 1720 aaPredicted RBP16.72■□□□□ 0.27
RFTN1-211ENST00000495666 ZNF335Q9H4Z2 1342 aaPredicted RBP16.71■□□□□ 0.27
RFTN1-211ENST00000495666 RNF17Q9BXT8 1623 aaKnown RBP16.71■□□□□ 0.27
RFTN1-211ENST00000495666 A2ML1A8K2U0 1454 aa16.71■□□□□ 0.27
RFTN1-211ENST00000495666 PZPP20742 1482 aa16.71■□□□□ 0.27
RFTN1-211ENST00000495666 KIF15Q9NS87 1388 aa16.69■□□□□ 0.26
RFTN1-211ENST00000495666 FAM50AQ14320 339 aaKnown RBP16.69■□□□□ 0.26
RFTN1-211ENST00000495666 PPP6R1Q9UPN7 881 aa16.69■□□□□ 0.26
RFTN1-211ENST00000495666 EIF2AK4Q9P2K8 1649 aaKnown RBP16.69■□□□□ 0.26
RFTN1-211ENST00000495666 ABCC3O15438 1527 aa16.69■□□□□ 0.26
RFTN1-211ENST00000495666 FGD6Q6ZV73 1430 aa16.69■□□□□ 0.26
RFTN1-211ENST00000495666 ZC3H13Q5T200 1668 aaKnown RBP16.69■□□□□ 0.26
RFTN1-211ENST00000495666 LTBP4Q8N2S1 1624 aa16.68■□□□□ 0.26
RFTN1-211ENST00000495666 PPARGC1BQ86YN6 1023 aaKnown RBP16.68■□□□□ 0.26
RFTN1-211ENST00000495666 MROH1Q8NDA8 1641 aa16.67■□□□□ 0.26
RFTN1-211ENST00000495666 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.67■□□□□ 0.26
RFTN1-211ENST00000495666 DUOX2Q9NRD8 1548 aa16.67■□□□□ 0.26
RFTN1-211ENST00000495666 ABCC5O15440 1437 aa16.67■□□□□ 0.26
RFTN1-211ENST00000495666 DAPK1P53355 1430 aa16.67■□□□□ 0.26
RFTN1-211ENST00000495666 PLA2R1Q13018 1463 aa16.66■□□□□ 0.26
RFTN1-211ENST00000495666 UGGT1Q9NYU2 1555 aa16.65■□□□□ 0.26
RFTN1-211ENST00000495666 TCOF1Q13428 1488 aaKnown RBP16.65■□□□□ 0.26
RFTN1-211ENST00000495666 PKD2Q13563 968 aa16.64■□□□□ 0.25
RFTN1-211ENST00000495666 FAM135AQ9P2D6 1515 aa16.64■□□□□ 0.25
RFTN1-211ENST00000495666 SCAF1Q9H7N4 1312 aaKnown RBP16.63■□□□□ 0.25
RFTN1-211ENST00000495666 NEURL4Q96JN8 1562 aa16.63■□□□□ 0.25
RFTN1-211ENST00000495666 SHANK2Q9UPX8 1470 aa16.62■□□□□ 0.25
RFTN1-211ENST00000495666 ERVK-7P63135 1459 aa16.61■□□□□ 0.25
RFTN1-211ENST00000495666 UBAP1LF5GYI3 381 aa16.6■□□□□ 0.25
RFTN1-211ENST00000495666 NLRP1Q9C000 1473 aa16.6■□□□□ 0.25
RFTN1-211ENST00000495666 PRDM15P57071 1507 aaPredicted RBP16.59■□□□□ 0.25
RFTN1-211ENST00000495666 SPATA31D1Q6ZQQ2 1576 aa16.59■□□□□ 0.25
RFTN1-211ENST00000495666 ITGAEP38570 1179 aa16.58■□□□□ 0.24
RFTN1-211ENST00000495666 ANKLE2Q86XL3 938 aa16.58■□□□□ 0.24
RFTN1-211ENST00000495666 THEMISQ8N1K5 641 aaPredicted RBP16.58■□□□□ 0.24
RFTN1-211ENST00000495666 ERBINQ96RT1 1412 aa16.58■□□□□ 0.24
RFTN1-211ENST00000495666 ANKRD30AQ9BXX3 1397 aa16.57■□□□□ 0.24
RFTN1-211ENST00000495666 UBR1Q8IWV7 1749 aa16.56■□□□□ 0.24
RFTN1-211ENST00000495666 IQGAP1P46940 1657 aa16.56■□□□□ 0.24
RFTN1-211ENST00000495666 KANK1Q14678 1352 aa16.56■□□□□ 0.24
RFTN1-211ENST00000495666 DEPDC5O75140 1603 aa16.56■□□□□ 0.24
RFTN1-211ENST00000495666 PIP4K2BP78356 416 aa16.55■□□□□ 0.24
RFTN1-211ENST00000495666 NPHP4O75161 1426 aaPredicted RBP16.54■□□□□ 0.24
RFTN1-211ENST00000495666 DISP3Q9P2K9 1392 aa16.54■□□□□ 0.24
RFTN1-211ENST00000495666 STAG3Q9UJ98 1225 aa16.54■□□□□ 0.24
RFTN1-211ENST00000495666 PIK3C2BO00750 1634 aa16.54■□□□□ 0.24
RFTN1-211ENST00000495666 IQSEC2Q5JU85 1478 aa16.51■□□□□ 0.23
RFTN1-211ENST00000495666 PHF23Q9BUL5 403 aaPredicted RBP16.51■□□□□ 0.23
RFTN1-211ENST00000495666 VWDEQ8N2E2 1590 aa16.5■□□□□ 0.23
RFTN1-211ENST00000495666 STRCP1A6NGW2 1772 aa16.49■□□□□ 0.23
RFTN1-211ENST00000495666 CPS1P31327 1500 aa16.47■□□□□ 0.23
RFTN1-211ENST00000495666 EFCAB6Q5THR3 1501 aa16.47■□□□□ 0.23
RFTN1-211ENST00000495666 SCAF11Q99590 1463 aaKnown RBP16.47■□□□□ 0.23
RFTN1-211ENST00000495666 SYNMO15061 1565 aa16.47■□□□□ 0.23
RFTN1-211ENST00000495666 ANKRD50Q9ULJ7 1429 aa16.46■□□□□ 0.23
RFTN1-211ENST00000495666 TXNDC2Q86VQ3 553 aa16.46■□□□□ 0.23
RFTN1-211ENST00000495666 ADGRL2O95490 1459 aa16.46■□□□□ 0.23
RFTN1-211ENST00000495666 MYO5BQ9ULV0 1848 aa16.45■□□□□ 0.22
RFTN1-211ENST00000495666 LTKP29376 864 aa16.45■□□□□ 0.22
RFTN1-211ENST00000495666 BCANQ96GW7 911 aa16.45■□□□□ 0.22
RFTN1-211ENST00000495666 ARHGAP31Q2M1Z3 1444 aa16.45■□□□□ 0.22
RFTN1-211ENST00000495666 MED14O60244 1454 aa16.44■□□□□ 0.22
RFTN1-211ENST00000495666 EID1Q9Y6B2 187 aa16.44■□□□□ 0.22
RFTN1-211ENST00000495666 CHGAP10645 457 aaKnown RBP16.43■□□□□ 0.22
RFTN1-211ENST00000495666 GCC2Q8IWJ2 1684 aa16.43■□□□□ 0.22
RFTN1-211ENST00000495666 LMTK2Q8IWU2 1503 aa16.41■□□□□ 0.22
RFTN1-211ENST00000495666 IDI1Q13907 227 aa16.41■□□□□ 0.22
RFTN1-211ENST00000495666 TET3O43151 1660 aa16.4■□□□□ 0.22
RFTN1-211ENST00000495666 TOM1O60784 492 aa16.4■□□□□ 0.22
RFTN1-211ENST00000495666 ADGRB3O60242 1522 aa16.4■□□□□ 0.22
RFTN1-211ENST00000495666 SLIT1O75093 1534 aa16.4■□□□□ 0.22
RFTN1-211ENST00000495666 HSPA1LP34931 641 aa16.39■□□□□ 0.21
RFTN1-211ENST00000495666 ILDR2Q71H61 639 aa16.39■□□□□ 0.21
RFTN1-211ENST00000495666 SLC26A8Q96RN1 970 aa16.39■□□□□ 0.21
RFTN1-211ENST00000495666 ARHGAP23Q9P227 1491 aa16.39■□□□□ 0.21
RFTN1-211ENST00000495666 TMEM2Q9UHN6 1383 aa16.38■□□□□ 0.21
RFTN1-211ENST00000495666 UNC13BO14795 1591 aa16.38■□□□□ 0.21
RFTN1-211ENST00000495666 RBM33Q96EV2 1170 aaKnown RBP16.38■□□□□ 0.21
RFTN1-211ENST00000495666 LRRC7Q96NW7 1537 aa16.38■□□□□ 0.21
RFTN1-211ENST00000495666 E9PCH4 1651 aa16.37■□□□□ 0.21
RFTN1-211ENST00000495666 NUTM2DQ5VT03 806 aaPredicted RBP16.37■□□□□ 0.21
RFTN1-211ENST00000495666 PPP1R15AO75807 674 aaPredicted RBP16.36■□□□□ 0.21
RFTN1-211ENST00000495666 XIRP1Q702N8 1843 aaKnown RBP16.35■□□□□ 0.21
RFTN1-211ENST00000495666 NOS1P29475 1434 aa16.35■□□□□ 0.21
RFTN1-211ENST00000495666 ALKQ9UM73 1620 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms