RNA–Protein interactions for RNA: ENST00000495640.1

COPS3-211, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 333 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-211ENST00000495640 GRXCR2A6NFK2 248 aa6.24□□□□□ -1.41
COPS3-211ENST00000495640 GNPATO15228 680 aa6.24□□□□□ -1.41
COPS3-211ENST00000495640 PRIM1P49642 420 aaKnown RBP6.24□□□□□ -1.41
COPS3-211ENST00000495640 NUTM2FA1L443 756 aa6.23□□□□□ -1.41
COPS3-211ENST00000495640 MAP3K9P80192 1104 aa6.23□□□□□ -1.41
COPS3-211ENST00000495640 HIC1Q14526 733 aa6.23□□□□□ -1.41
COPS3-211ENST00000495640 DOK7Q18PE1 504 aa6.23□□□□□ -1.41
COPS3-211ENST00000495640 ZNF316A6NFI3 1004 aaPredicted RBP6.22□□□□□ -1.41
COPS3-211ENST00000495640 DDRGK1Q96HY6 314 aa6.22□□□□□ -1.41
COPS3-211ENST00000495640 RSPH6AQ9H0K4 717 aa6.22□□□□□ -1.41
COPS3-211ENST00000495640 G3V3G9 751 aa6.21□□□□□ -1.42
COPS3-211ENST00000495640 ONECUT3O60422 494 aaPredicted RBP6.21□□□□□ -1.42
COPS3-211ENST00000495640 VARS2Q5ST30 1063 aaKnown RBP6.21□□□□□ -1.42
COPS3-211ENST00000495640 GPR153Q6NV75 609 aa6.21□□□□□ -1.42
COPS3-211ENST00000495640 ZNF710Q8N1W2 664 aa6.21□□□□□ -1.42
COPS3-211ENST00000495640 UPF1Q92900 1129 aaKnown RBP eCLIP6.21□□□□□ -1.42
COPS3-211ENST00000495640 ERBB3P21860 1342 aa6.21□□□□□ -1.42
COPS3-211ENST00000495640 FCHSD2O94868 740 aa6.2□□□□□ -1.42
COPS3-211ENST00000495640 UBTFP17480 764 aaKnown RBP6.2□□□□□ -1.42
COPS3-211ENST00000495640 PTGDRQ13258 359 aa6.2□□□□□ -1.42
COPS3-211ENST00000495640 DDX12PQ92771 950 aa6.2□□□□□ -1.42
COPS3-211ENST00000495640 C1orf115Q9H7X2 142 aa6.2□□□□□ -1.42
COPS3-211ENST00000495640 GOPCQ9HD26 462 aa6.2□□□□□ -1.42
COPS3-211ENST00000495640 ZNF687Q8N1G0 1237 aa6.18□□□□□ -1.42
COPS3-211ENST00000495640 RNF166Q96A37 237 aaPredicted RBP6.18□□□□□ -1.42
COPS3-211ENST00000495640 REPIN1Q9BWE0 567 aaKnown RBP6.18□□□□□ -1.42
COPS3-211ENST00000495640 ZSWIM6Q9HCJ5 1215 aa6.18□□□□□ -1.42
COPS3-211ENST00000495640 EVI5O60447 810 aa6.17□□□□□ -1.42
COPS3-211ENST00000495640 MS4A1P11836 297 aa6.17□□□□□ -1.42
COPS3-211ENST00000495640 TMUB1Q9BVT8 246 aa6.17□□□□□ -1.42
COPS3-211ENST00000495640 GIGYF2Q6Y7W6 1299 aaKnown RBP6.16□□□□□ -1.42
COPS3-211ENST00000495640 ANO8Q9HCE9 1232 aaPredicted RBP6.16□□□□□ -1.42
COPS3-211ENST00000495640 NPDC1Q9NQX5 325 aaPredicted RBP6.16□□□□□ -1.42
COPS3-211ENST00000495640 RIMBP2O15034 1052 aa6.15□□□□□ -1.42
COPS3-211ENST00000495640 PTCD2Q8WV60 388 aaKnown RBP6.15□□□□□ -1.42
COPS3-211ENST00000495640 TBC1D12O60347 775 aa6.14□□□□□ -1.43
COPS3-211ENST00000495640 FLIIQ13045 1269 aa6.14□□□□□ -1.43
COPS3-211ENST00000495640 TTLL12Q14166 644 aaPredicted RBP6.14□□□□□ -1.43
COPS3-211ENST00000495640 CDHR5Q9HBB8 845 aa6.14□□□□□ -1.43
COPS3-211ENST00000495640 MYT1LQ9UL68 1186 aa6.14□□□□□ -1.43
COPS3-211ENST00000495640 KHSRPQ92945 711 aaKnown RBP eCLIP6.13□□□□□ -1.43
COPS3-211ENST00000495640 PHOX2BQ99453 314 aa6.13□□□□□ -1.43
COPS3-211ENST00000495640 SLC34A2O95436 690 aa6.12□□□□□ -1.43
COPS3-211ENST00000495640 EN1Q05925 392 aaPredicted RBP6.12□□□□□ -1.43
COPS3-211ENST00000495640 ARSIQ5FYB1 569 aa6.12□□□□□ -1.43
COPS3-211ENST00000495640 A6NJR5 290 aa6.1□□□□□ -1.43
COPS3-211ENST00000495640 ARID3CA6NKF2 412 aa6.1□□□□□ -1.43
COPS3-211ENST00000495640 PHF14O94880 888 aa6.1□□□□□ -1.43
COPS3-211ENST00000495640 SH3D19Q5HYK7 790 aa6.1□□□□□ -1.43
COPS3-211ENST00000495640 MCM6Q14566 821 aa6.09□□□□□ -1.43
COPS3-211ENST00000495640 POTEEQ6S8J3 1075 aa6.09□□□□□ -1.43
COPS3-211ENST00000495640 KDM4FA0A1W2PPD8 638 aa6.08□□□□□ -1.44
COPS3-211ENST00000495640 APBB1O00213 710 aa6.08□□□□□ -1.44
COPS3-211ENST00000495640 EPAS1Q99814 870 aa6.08□□□□□ -1.44
COPS3-211ENST00000495640 GPCPD1Q9NPB8 672 aa6.08□□□□□ -1.44
COPS3-211ENST00000495640 PCDHGA10Q9Y5H3 936 aa6.08□□□□□ -1.44
COPS3-211ENST00000495640 CLCN1P35523 988 aa6.07□□□□□ -1.44
COPS3-211ENST00000495640 LSM11P83369 360 aaKnown RBP eCLIP6.07□□□□□ -1.44
COPS3-211ENST00000495640 MDM2Q00987 491 aaPredicted RBP6.07□□□□□ -1.44
COPS3-211ENST00000495640 TSR1Q2NL82 804 aaKnown RBP6.07□□□□□ -1.44
COPS3-211ENST00000495640 CLUAP1Q96AJ1 413 aa6.07□□□□□ -1.44
COPS3-211ENST00000495640 PCMTD1Q96MG8 357 aaPredicted RBP6.07□□□□□ -1.44
COPS3-211ENST00000495640 MAP3K7O43318 606 aa6.06□□□□□ -1.44
COPS3-211ENST00000495640 TRAK2O60296 914 aa6.06□□□□□ -1.44
COPS3-211ENST00000495640 HRCP23327 699 aa6.06□□□□□ -1.44
COPS3-211ENST00000495640 TRIM26Q12899 539 aaPredicted RBP6.06□□□□□ -1.44
COPS3-211ENST00000495640 SKIV2LQ15477 1246 aaKnown RBP6.06□□□□□ -1.44
COPS3-211ENST00000495640 ARID3AQ99856 593 aa6.06□□□□□ -1.44
COPS3-211ENST00000495640 PODXL2Q9NZ53 605 aa6.06□□□□□ -1.44
COPS3-211ENST00000495640 SSTR3P32745 418 aaPredicted RBP6.05□□□□□ -1.44
COPS3-211ENST00000495640 METTL3Q86U44 580 aaKnown RBP6.05□□□□□ -1.44
COPS3-211ENST00000495640 FAM217BQ9NTX9 383 aaPredicted RBP6.05□□□□□ -1.44
COPS3-211ENST00000495640 TYW1BQ6NUM6 668 aa6.04□□□□□ -1.44
COPS3-211ENST00000495640 ANKRD13DQ6ZTN6 518 aa6.04□□□□□ -1.44
COPS3-211ENST00000495640 FNBP4Q8N3X1 1017 aaPredicted RBP6.04□□□□□ -1.44
COPS3-211ENST00000495640 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.04□□□□□ -1.44
COPS3-211ENST00000495640 NUDT7P0C024 238 aa6.03□□□□□ -1.44
COPS3-211ENST00000495640 FAM161AQ3B820 660 aa6.03□□□□□ -1.44
COPS3-211ENST00000495640 TTC13Q8NBP0 860 aa6.03□□□□□ -1.44
COPS3-211ENST00000495640 PROCA1Q8NCQ7 364 aaPredicted RBP6.03□□□□□ -1.44
COPS3-211ENST00000495640 RBM33Q96EV2 1170 aaKnown RBP6.03□□□□□ -1.44
COPS3-211ENST00000495640 BEGAINQ9BUH8 593 aa6.03□□□□□ -1.44
COPS3-211ENST00000495640 CCDC82Q8N4S0 544 aa6.02□□□□□ -1.45
COPS3-211ENST00000495640 PXYLP1Q8TE99 480 aa6.02□□□□□ -1.45
COPS3-211ENST00000495640 NLRP7Q8WX94 980 aa6.02□□□□□ -1.45
COPS3-211ENST00000495640 FBXW7Q969H0 707 aa6.02□□□□□ -1.45
COPS3-211ENST00000495640 JPH4Q96JJ6 628 aa6.02□□□□□ -1.45
COPS3-211ENST00000495640 LHX6Q9UPM6 363 aa6.02□□□□□ -1.45
COPS3-211ENST00000495640 PCDHGA4Q9Y5G9 962 aa6.02□□□□□ -1.45
COPS3-211ENST00000495640 ADGRG1Q9Y653 693 aa6.02□□□□□ -1.45
COPS3-211ENST00000495640 PBX2P40425 430 aa6.01□□□□□ -1.45
COPS3-211ENST00000495640 FOSBP53539 338 aa6.01□□□□□ -1.45
COPS3-211ENST00000495640 MYSM1Q5VVJ2 828 aa6.01□□□□□ -1.45
COPS3-211ENST00000495640 FBXO31Q5XUX0 539 aaPredicted RBP6.01□□□□□ -1.45
COPS3-211ENST00000495640 PADI6Q6TGC4 694 aa6.01□□□□□ -1.45
COPS3-211ENST00000495640 AXIN2Q9Y2T1 843 aa6.01□□□□□ -1.45
COPS3-211ENST00000495640 OATP04181 439 aa6□□□□□ -1.45
COPS3-211ENST00000495640 PROSER2Q86WR7 435 aaPredicted RBP6□□□□□ -1.45
COPS3-211ENST00000495640 POM121Q96HA1 1249 aa6□□□□□ -1.45
COPS3-211ENST00000495640 RBM27Q9P2N5 1060 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms