RNA–Protein interactions for RNA: ENST00000495457.1

RPRD1B-206, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-206ENST00000495457 DMRT2Q9Y5R5 561 aa22.2■■□□□ 1.14
RPRD1B-206ENST00000495457 FBXO41Q8TF61 875 aa22.19■■□□□ 1.14
RPRD1B-206ENST00000495457 DAPK1P53355 1430 aa22.19■■□□□ 1.14
RPRD1B-206ENST00000495457 NCOA1Q15788 1441 aa22.19■■□□□ 1.14
RPRD1B-206ENST00000495457 MYO3AQ8NEV4 1616 aa22.19■■□□□ 1.14
RPRD1B-206ENST00000495457 SHANK2Q9UPX8 1470 aa22.18■■□□□ 1.14
RPRD1B-206ENST00000495457 CAMSAP1Q5T5Y3 1602 aa22.17■■□□□ 1.14
RPRD1B-206ENST00000495457 FAM135AQ9P2D6 1515 aa22.17■■□□□ 1.14
RPRD1B-206ENST00000495457 RRP7BPQ9NSQ0 103 aa22.17■■□□□ 1.14
RPRD1B-206ENST00000495457 PZPP20742 1482 aa22.16■■□□□ 1.14
RPRD1B-206ENST00000495457 KIF15Q9NS87 1388 aa22.16■■□□□ 1.14
RPRD1B-206ENST00000495457 CEP170BQ9Y4F5 1589 aaPredicted RBP22.16■■□□□ 1.14
RPRD1B-206ENST00000495457 DUOX2Q9NRD8 1548 aa22.16■■□□□ 1.14
RPRD1B-206ENST00000495457 DNMT1P26358 1616 aaKnown RBP22.15■■□□□ 1.14
RPRD1B-206ENST00000495457 RNF17Q9BXT8 1623 aaKnown RBP22.15■■□□□ 1.14
RPRD1B-206ENST00000495457 PTPRTO14522 1441 aa22.14■■□□□ 1.14
RPRD1B-206ENST00000495457 CROCC2H7BZ55 1655 aa22.14■■□□□ 1.14
RPRD1B-206ENST00000495457 CERKQ8TCT0 537 aa22.14■■□□□ 1.13
RPRD1B-206ENST00000495457 ZNF142P52746 1687 aaPredicted RBP22.14■■□□□ 1.13
RPRD1B-206ENST00000495457 TNRQ92752 1358 aa22.13■■□□□ 1.13
RPRD1B-206ENST00000495457 EIF2AK4Q9P2K8 1649 aaKnown RBP22.13■■□□□ 1.13
RPRD1B-206ENST00000495457 NCKAP5LQ9HCH0 1330 aa22.13■■□□□ 1.13
RPRD1B-206ENST00000495457 CHIC2Q9UKJ5 165 aa22.13■■□□□ 1.13
RPRD1B-206ENST00000495457 ABCC3O15438 1527 aa22.12■■□□□ 1.13
RPRD1B-206ENST00000495457 MROH1Q8NDA8 1641 aa22.12■■□□□ 1.13
RPRD1B-206ENST00000495457 A2ML1A8K2U0 1454 aa22.1■■□□□ 1.13
RPRD1B-206ENST00000495457 FAM50AQ14320 339 aaKnown RBP22.1■■□□□ 1.13
RPRD1B-206ENST00000495457 ERBINQ96RT1 1412 aa22.09■■□□□ 1.13
RPRD1B-206ENST00000495457 PLA2R1Q13018 1463 aa22.09■■□□□ 1.13
RPRD1B-206ENST00000495457 ANKRD30AQ9BXX3 1397 aa22.07■■□□□ 1.12
RPRD1B-206ENST00000495457 ZC3H13Q5T200 1668 aaKnown RBP22.05■■□□□ 1.12
RPRD1B-206ENST00000495457 PKD2Q13563 968 aa22.05■■□□□ 1.12
RPRD1B-206ENST00000495457 PPARGC1BQ86YN6 1023 aaKnown RBP22.04■■□□□ 1.12
RPRD1B-206ENST00000495457 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.04■■□□□ 1.126e-8■■■□□ 17.5
RPRD1B-206ENST00000495457 PRDM15P57071 1507 aaPredicted RBP22.03■■□□□ 1.12
RPRD1B-206ENST00000495457 CEP152O94986 1710 aa22.02■■□□□ 1.12
RPRD1B-206ENST00000495457 ERVK-7P63135 1459 aa22.02■■□□□ 1.12
RPRD1B-206ENST00000495457 ADGRL2O95490 1459 aa22.01■■□□□ 1.11
RPRD1B-206ENST00000495457 NLRP1Q9C000 1473 aa22.01■■□□□ 1.11
RPRD1B-206ENST00000495457 SPATA31D1Q6ZQQ2 1576 aa22■■□□□ 1.11
RPRD1B-206ENST00000495457 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.99■■□□□ 1.11
RPRD1B-206ENST00000495457 LTBP4Q8N2S1 1624 aa21.99■■□□□ 1.11
RPRD1B-206ENST00000495457 ZNF335Q9H4Z2 1342 aaPredicted RBP21.98■■□□□ 1.11
RPRD1B-206ENST00000495457 DEPDC5O75140 1603 aa21.98■■□□□ 1.11
RPRD1B-206ENST00000495457 UGGT1Q9NYU2 1555 aa21.97■■□□□ 1.11
RPRD1B-206ENST00000495457 THEMISQ8N1K5 641 aaPredicted RBP21.97■■□□□ 1.11
RPRD1B-206ENST00000495457 KANK1Q14678 1352 aa21.96■■□□□ 1.11
RPRD1B-206ENST00000495457 ARHGAP31Q2M1Z3 1444 aa21.95■■□□□ 1.1
RPRD1B-206ENST00000495457 ANKLE2Q86XL3 938 aa21.93■■□□□ 1.1
RPRD1B-206ENST00000495457 NEURL4Q96JN8 1562 aa21.93■■□□□ 1.1
RPRD1B-206ENST00000495457 ANKRD50Q9ULJ7 1429 aa21.93■■□□□ 1.1
RPRD1B-206ENST00000495457 VWDEQ8N2E2 1590 aa21.91■■□□□ 1.1
RPRD1B-206ENST00000495457 LMTK2Q8IWU2 1503 aa21.9■■□□□ 1.1
RPRD1B-206ENST00000495457 ITGAEP38570 1179 aa21.88■■□□□ 1.09
RPRD1B-206ENST00000495457 POLR1AO95602 1720 aaPredicted RBP21.88■■□□□ 1.09
RPRD1B-206ENST00000495457 CFAP65Q6ZU64 1925 aaKnown RBP21.88■■□□□ 1.09
RPRD1B-206ENST00000495457 NPHP4O75161 1426 aaPredicted RBP21.85■■□□□ 1.09
RPRD1B-206ENST00000495457 ROCK1Q13464 1354 aa21.85■■□□□ 1.09
RPRD1B-206ENST00000495457 MED14O60244 1454 aa21.84■■□□□ 1.09
RPRD1B-206ENST00000495457 IQSEC2Q5JU85 1478 aa21.83■■□□□ 1.09
RPRD1B-206ENST00000495457 UBR1Q8IWV7 1749 aa21.83■■□□□ 1.09
RPRD1B-206ENST00000495457 EFCAB6Q5THR3 1501 aa21.83■■□□□ 1.09
RPRD1B-206ENST00000495457 IDI1Q13907 227 aa21.81■■□□□ 1.08
RPRD1B-206ENST00000495457 NOS1P29475 1434 aa21.8■■□□□ 1.08
RPRD1B-206ENST00000495457 LTKP29376 864 aa21.8■■□□□ 1.08
RPRD1B-206ENST00000495457 SYNMO15061 1565 aa21.79■■□□□ 1.08
RPRD1B-206ENST00000495457 PIK3C2BO00750 1634 aa21.79■■□□□ 1.08
RPRD1B-206ENST00000495457 ARHGAP23Q9P227 1491 aa21.78■■□□□ 1.08
RPRD1B-206ENST00000495457 STAG3Q9UJ98 1225 aa21.78■■□□□ 1.08
RPRD1B-206ENST00000495457 SCAF11Q99590 1463 aaKnown RBP21.77■■□□□ 1.08
RPRD1B-206ENST00000495457 SLIT1O75093 1534 aa21.77■■□□□ 1.08
RPRD1B-206ENST00000495457 IQGAP1P46940 1657 aa21.77■■□□□ 1.08
RPRD1B-206ENST00000495457 TXNDC2Q86VQ3 553 aa21.77■■□□□ 1.08
RPRD1B-206ENST00000495457 UNC13BO14795 1591 aa21.77■■□□□ 1.08
RPRD1B-206ENST00000495457 RRBP1Q9P2E9 1410 aaKnown RBP21.76■■□□□ 1.07
RPRD1B-206ENST00000495457 TMEM2Q9UHN6 1383 aa21.74■■□□□ 1.07
RPRD1B-206ENST00000495457 UBAP1LF5GYI3 381 aa21.74■■□□□ 1.07
RPRD1B-206ENST00000495457 RPRD2Q5VT52 1461 aaKnown RBP21.74■■□□□ 1.07
RPRD1B-206ENST00000495457 CPS1P31327 1500 aa21.74■■□□□ 1.07
RPRD1B-206ENST00000495457 TET3O43151 1660 aa21.72■■□□□ 1.07
RPRD1B-206ENST00000495457 SLC52A1Q9NWF4 448 aa21.72■■□□□ 1.07
RPRD1B-206ENST00000495457 EID1Q9Y6B2 187 aa21.72■■□□□ 1.07
RPRD1B-206ENST00000495457 NUP155O75694 1391 aa21.71■■□□□ 1.07
RPRD1B-206ENST00000495457 ADGRB3O60242 1522 aa21.69■■□□□ 1.06
RPRD1B-206ENST00000495457 IQGAP3Q86VI3 1631 aa21.68■■□□□ 1.06
RPRD1B-206ENST00000495457 KDM5AP29375 1690 aaKnown RBP21.67■■□□□ 1.06
RPRD1B-206ENST00000495457 GCC2Q8IWJ2 1684 aa21.67■■□□□ 1.06
RPRD1B-206ENST00000495457 E9PCH4 1651 aa21.66■■□□□ 1.06
RPRD1B-206ENST00000495457 STRCP1A6NGW2 1772 aa21.64■■□□□ 1.06
RPRD1B-206ENST00000495457 LRRC7Q96NW7 1537 aa21.63■■□□□ 1.05
RPRD1B-206ENST00000495457 NAIPQ13075 1403 aa21.62■■□□□ 1.05
RPRD1B-206ENST00000495457 SLC26A8Q96RN1 970 aa21.61■■□□□ 1.05
RPRD1B-206ENST00000495457 CHGAP10645 457 aaKnown RBP21.6■■□□□ 1.05
RPRD1B-206ENST00000495457 PIP4K2BP78356 416 aa21.6■■□□□ 1.05
RPRD1B-206ENST00000495457 SENP3Q9H4L4 574 aaPredicted RBP21.6■■□□□ 1.05
RPRD1B-206ENST00000495457 SCAF1Q9H7N4 1312 aaKnown RBP21.59■■□□□ 1.05
RPRD1B-206ENST00000495457 TOM1O60784 492 aa21.59■■□□□ 1.05
RPRD1B-206ENST00000495457 ZFYVE9O95405 1425 aa21.59■■□□□ 1.05
RPRD1B-206ENST00000495457 TMEM131LA2VDJ0 1609 aa21.58■■□□□ 1.05
RPRD1B-206ENST00000495457 RIMS2Q9UQ26 1411 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms